Gene annotation
Transcriptome id Sobic.006G203200.1
Synonym Sb06g027450, BRX, NLM9
Functional annotation Disease resistance/zinc finger/chromosome condensation-like region protein, putative, expressed
UniProt A0A1Z5RFQ2
Pfam PF08381
Panther DB PTHR22870 PTHR22870:SF190
NCBI CDD -
KEGG Orthology -
Gene Ontology -


Orthologs (automatic annotation)
TAIR AT1G31880 : DZC (Disease resistance/zinc finger/chromosome condensation-like region) domain containing protein
RAP-DB (Rice) LOC_Os02g47230.1 : Disease resistance/zinc finger/chromosome condensation-like region protein, putative, expressed
MaizeGDB (Corn) Zm00025a009943 , Zm00025a056938 , Zm00025a021675
Brachypodium KQJ84394 , KQK00898 , KQK00899 , PNT69275 , PNT69276 , PNT69277
Barley HORVU0Hr1G016680.3 , HORVU0Hr1G016680.2 , HORVU0Hr1G016680.7 , HORVU0Hr1G016680.6 , HORVU0Hr1G016680.5 , HORVU0Hr1G016680.4 , HORVU0Hr1G016680.9 , HORVU0Hr1G016680.1 , HORVU6Hr1G068280.1 , HORVU6Hr1G068280.2 , HORVU6Hr1G068280.3 , HORVU6Hr1G068350.2 , HORVU6Hr1G068350.3 , HORVU6Hr1G068350.1 , HORVU6Hr1G068350.4 , HORVU6Hr1G068350.5 , HORVU2Hr1G101750.8 , HORVU2Hr1G101750.9 , HORVU2Hr1G101750.1 , HORVU2Hr1G101750.2 , HORVU2Hr1G101750.3 , HORVU2Hr1G101750.4 , HORVU2Hr1G101750.5 , HORVU2Hr1G101750.6 , HORVU2Hr1G101750.7 , HORVU0Hr1G016680.12 , HORVU2Hr1G101750.10 , HORVU2Hr1G101750.11 , HORVU0Hr1G016680.13 , HORVU0Hr1G016680.11 , HORVU0Hr1G016680.10 , HORVU0Hr1G016680.16 , HORVU0Hr1G016680.8 , HORVU0Hr1G016680.15 , HORVU0Hr1G016680.14
Wheat TraesCS2A02G438800 , TraesCS6B02G296800 , TraesCS6A02G269500 , TraesCS6A02G269500 , TraesCS6D02G245400 , TraesCS6D02G245400 , TraesCS2B02G458600 , TraesCS2D02G435400
Populus -


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Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.002G016900 OsFBD13 - F-box and FBD domain containing protein, expressed -
2 Sobic.003G244700 SAG (Senescence-associated gene): up-regulated gene during dark-induced senescence.(PubMedID : 27586543)@pyruvate kinase, putative, expressed K00873: PK, pyruvate kinase
3 Sobic.002G253600 KH domain-containing protein, putative, expressed K13162: poly(rC)-binding protein 2
4 Sobic.006G120400 no apical meristem protein, putative, expressed -
5 Sobic.002G341100 bromodomain domain containing protein, expressed -
6 Sobic.001G130700 domain of unknown function DUF966 domain containing protein, expressed -
7 Sobic.008G156200 zinc finger family protein, putative, expressed K16277: E3 ubiquitin-protein ligase DRIP
8 Sobic.009G242800 "SAG (Senescence-associated gene): differentially expressed gene during developmental, salt-induced, and dark-induced senescence./late senescence marker (common during developmental, salt-induced, and dark-induced senescence)"(PubMedID : 27586543)@protein kinase domain containing protein, expressed -
9 Sobic.002G002500 tobamovirus multiplication protein, putative, expressed -
10 Sobic.003G035500 hexokinase, putative, expressed K00844: hexokinase
11 Sobic.008G165100 G-patch domain containing protein, putative, expressed K13103: tuftelin-interacting protein 11
12 Sobic.003G022200 DUF538 domain containing protein, putative, expressed -
13 Sobic.002G095700 C2-BTB1 - Bric-a-Brac, Tramtrack, Broad Complex BTB domain with C2 subfamily conserved sequence, expressed K10523: speckle-type POZ protein
14 Sobic.008G073000 expressed protein -
15 Sobic.002G067800 - -
16 Sobic.002G362300 prefoldin, putative, expressed -
17 Sobic.004G256200 B-box (BBX) protein(PubMedID : 30626335)@SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@CCT/B-box zinc finger protein, putative, expressed -
18 Sobic.005G030300 protein kinase PKN/PRK1, effector, putative, expressed -
19 Sobic.005G072400 expressed protein -
20 Sobic.002G059866 - -


Gene co-expression network
sample Sobic006G203200 Sobic006G203200 Sobic002G016900 Sobic002G016900 Sobic006G203200--Sobic002G016900 Sobic003G244700 Sobic003G244700 Sobic006G203200--Sobic003G244700 Sobic002G253600 Sobic002G253600 Sobic006G203200--Sobic002G253600 Sobic006G120400 Sobic006G120400 Sobic006G203200--Sobic006G120400 Sobic002G341100 Sobic002G341100 Sobic006G203200--Sobic002G341100 Sobic001G130700 Sobic001G130700 Sobic006G203200--Sobic001G130700 Sobic008G156200 Sobic008G156200 Sobic006G203200--Sobic008G156200 Sobic009G242800 Sobic009G242800 Sobic006G203200--Sobic009G242800 Sobic002G002500 Sobic002G002500 Sobic006G203200--Sobic002G002500 Sobic002G059866 Sobic002G059866 Sobic002G016900--Sobic002G059866 Sobic002G016900--Sobic006G203200 Sobic002G016900--Sobic002G253600 Sobic002G016900--Sobic008G156200 Sobic003G174200 Sobic003G174200 Sobic002G016900--Sobic003G174200 Sobic010G270800 Sobic010G270800 Sobic002G016900--Sobic010G270800 Sobic003G022200 Sobic003G022200 Sobic002G016900--Sobic003G022200 Sobic002G016900--Sobic003G244700 Sobic003G035500 Sobic003G035500 Sobic002G016900--Sobic003G035500 Sobic003G244700--Sobic006G203200 Sobic003G244700--Sobic002G253600 Sobic002G019600 Sobic002G019600 Sobic003G244700--Sobic002G019600 Sobic002G050500 Sobic002G050500 Sobic003G244700--Sobic002G050500 Sobic002G362300 Sobic002G362300 Sobic003G244700--Sobic002G362300 Sobic001G371000 Sobic001G371000 Sobic003G244700--Sobic001G371000 Sobic010G235500 Sobic010G235500 Sobic003G244700--Sobic010G235500 Sobic003G244700--Sobic002G016900 Sobic001G384600 Sobic001G384600 Sobic003G244700--Sobic001G384600 Sobic005G072400 Sobic005G072400 Sobic002G253600--Sobic005G072400 Sobic002G253600--Sobic002G016900 Sobic002G253600--Sobic003G244700 Sobic009G126800 Sobic009G126800 Sobic002G253600--Sobic009G126800 Sobic002G253600--Sobic006G203200 Sobic002G253600--Sobic008G156200 Sobic006G278200 Sobic006G278200 Sobic002G253600--Sobic006G278200 Sobic002G253600--Sobic003G022200 Sobic003G415100 Sobic003G415100 Sobic002G253600--Sobic003G415100 Sobic006G120400--Sobic009G242800 Sobic006G120400--Sobic002G341100 Sobic006G120400--Sobic006G203200 Sobic007G155900 Sobic007G155900 Sobic006G120400--Sobic007G155900 Sobic008G015700 Sobic008G015700 Sobic006G120400--Sobic008G015700 Sobic008G106000 Sobic008G106000 Sobic006G120400--Sobic008G106000 Sobic007G043500 Sobic007G043500 Sobic006G120400--Sobic007G043500 Sobic004G256200 Sobic004G256200 Sobic006G120400--Sobic004G256200 Sobic002G001600 Sobic002G001600 Sobic006G120400--Sobic002G001600 Sobic001G033400 Sobic001G033400 Sobic002G341100--Sobic001G033400 Sobic001G041400 Sobic001G041400 Sobic002G341100--Sobic001G041400 Sobic002G341100--Sobic006G278200 Sobic002G095700 Sobic002G095700 Sobic002G341100--Sobic002G095700 Sobic002G067800 Sobic002G067800 Sobic002G341100--Sobic002G067800 Sobic002G341100--Sobic003G035500 Sobic008G073000 Sobic008G073000 Sobic002G341100--Sobic008G073000 Sobic002G341100--Sobic004G256200 Sobic002G341100--Sobic006G120400 Sobic001G130700--Sobic003G022200 Sobic009G257500 Sobic009G257500 Sobic001G130700--Sobic009G257500 Sobic001G130700--Sobic008G156200 Sobic001G130700--Sobic002G253600 Sobic007G209000 Sobic007G209000 Sobic001G130700--Sobic007G209000 Sobic001G130700--Sobic005G072400 Sobic001G130700--Sobic001G384600 Sobic001G130700--Sobic006G203200 Sobic006G037300 Sobic006G037300 Sobic001G130700--Sobic006G037300 Sobic010G207400 Sobic010G207400 Sobic008G156200--Sobic010G207400 Sobic002G247300 Sobic002G247300 Sobic008G156200--Sobic002G247300 Sobic008G156200--Sobic003G035500 Sobic004G075700 Sobic004G075700 Sobic008G156200--Sobic004G075700 Sobic005G131800 Sobic005G131800 Sobic008G156200--Sobic005G131800 Sobic003G412200 Sobic003G412200 Sobic008G156200--Sobic003G412200 Sobic010G112700 Sobic010G112700 Sobic008G156200--Sobic010G112700 Sobic008G156200--Sobic002G016900 Sobic004G038900 Sobic004G038900 Sobic008G156200--Sobic004G038900 Sobic010G218100 Sobic010G218100 Sobic009G242800--Sobic010G218100 Sobic009G242800--Sobic006G120400 Sobic008G101800 Sobic008G101800 Sobic009G242800--Sobic008G101800 Sobic005G162600 Sobic005G162600 Sobic009G242800--Sobic005G162600 Sobic002G253500 Sobic002G253500 Sobic009G242800--Sobic002G253500 Sobic010G218500 Sobic010G218500 Sobic009G242800--Sobic010G218500 Sobic009G242800--Sobic006G203200 Sobic002G221900 Sobic002G221900 Sobic009G242800--Sobic002G221900 Sobic001G222300 Sobic001G222300 Sobic009G242800--Sobic001G222300 Sobic009G022100 Sobic009G022100 Sobic002G002500--Sobic009G022100 Sobic002G002500--Sobic002G067800 Sobic002G002500--Sobic008G073000 Sobic002G045400 Sobic002G045400 Sobic002G002500--Sobic002G045400 Sobic008G165100 Sobic008G165100 Sobic002G002500--Sobic008G165100 Sobic003G433500 Sobic003G433500 Sobic002G002500--Sobic003G433500 Sobic005G059100 Sobic005G059100 Sobic002G002500--Sobic005G059100 Sobic009G216000 Sobic009G216000 Sobic002G002500--Sobic009G216000 Sobic002G159200 Sobic002G159200 Sobic002G002500--Sobic002G159200
Octagon: transcription factors


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