Gene annotation
Transcriptome id Sobic.001G130700.1
Synonym Sb01g011460
Functional annotation domain of unknown function DUF966 domain containing protein, expressed
UniProt C5WPH4
Pfam PF06136
Panther DB PTHR31083 PTHR31083:SF8
NCBI CDD -
KEGG Orthology -
Gene Ontology -


Orthologs (automatic annotation)
TAIR AT2G28150 : Domain of unknown function (DUF966)
RAP-DB (Rice) LOC_Os03g48600.1 : domain of unknown function DUF966 domain containing protein, expressed
MaizeGDB (Corn) Zm00025a007668 , Zm00025a017084 , Zm00025a005577
Brachypodium KQK13711 , KQK13713 , KQK13712 , KQK13714
Barley HORVU4Hr1G005250.4 , HORVU4Hr1G005250.6 , HORVU4Hr1G005250.7 , HORVU4Hr1G005250.1 , HORVU4Hr1G005250.2 , HORVU4Hr1G005250.27 , HORVU4Hr1G005250.26 , HORVU4Hr1G005250.23 , HORVU4Hr1G005250.22 , HORVU4Hr1G005250.21 , HORVU4Hr1G005250.20 , HORVU4Hr1G005250.5 , HORVU4Hr1G005250.3 , HORVU4Hr1G005250.9 , HORVU4Hr1G005250.8 , HORVU4Hr1G005250.16 , HORVU4Hr1G005250.17 , HORVU4Hr1G005250.14 , HORVU4Hr1G005250.15 , HORVU4Hr1G005250.12 , HORVU4Hr1G005250.13 , HORVU4Hr1G005250.10 , HORVU4Hr1G005250.11 , HORVU4Hr1G005250.18 , HORVU4Hr1G005250.19
Wheat TraesCS4D02G029700 , TraesCS4B02G032000 , TraesCS2B02G035500 , TraesCS2B02G035500 , TraesCS4A02G280800 , TraesCS4A02G280800
Populus -


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cDNA sequences
Sobic.001G130700


Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.003G022200 DUF538 domain containing protein, putative, expressed -
2 Sobic.009G257500 expressed protein -
3 Sobic.008G156200 zinc finger family protein, putative, expressed K16277: E3 ubiquitin-protein ligase DRIP
4 Sobic.002G253600 KH domain-containing protein, putative, expressed K13162: poly(rC)-binding protein 2
5 Sobic.007G209000 expressed protein -
6 Sobic.005G072400 expressed protein -
7 Sobic.001G384600 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@endoglucanase, putative, expressed -
8 Sobic.006G203200 Disease resistance/zinc finger/chromosome condensation-like region protein, putative, expressed -
9 Sobic.006G037300 membrane associated DUF588 domain containing protein, putative, expressed -
10 Sobic.003G415100 BTBM1 - Bric-a-Brac, Tramtrack, Broad Complex BTB domain with Meprin and TRAF Homology MATH domain, expressed -
11 Sobic.006G126600 Trihelix Family(PubMedID : 24864043)@MYB family transcription factor, putative, expressed -
12 Sobic.002G016900 OsFBD13 - F-box and FBD domain containing protein, expressed -
13 Sobic.005G177900 HVA22, putative, expressed K17279: receptor expression-enhancing protein 5/6
14 Sobic.009G254000 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@serine/threonine-protein kinase, putative, expressed -
15 Sobic.001G123201 - -
16 Sobic.004G250600 NHL repeat-containing protein, putative, expressed -
17 Sobic.006G278200 RNA-binding region RNP-1, putative, expressed -
18 Sobic.010G189100 expressed protein -
19 Sobic.009G192500 OsFBX169 - F-box domain containing protein, expressed -
20 Sobic.005G131800 DNA-directed RNA polymerase III subunit RPC1, putative, expressed K03006: RPB1, DNA-directed RNA polymerase II subunit RPB1


Gene co-expression network
sample Sobic001G130700 Sobic001G130700 Sobic003G022200 Sobic003G022200 Sobic001G130700--Sobic003G022200 Sobic009G257500 Sobic009G257500 Sobic001G130700--Sobic009G257500 Sobic008G156200 Sobic008G156200 Sobic001G130700--Sobic008G156200 Sobic002G253600 Sobic002G253600 Sobic001G130700--Sobic002G253600 Sobic007G209000 Sobic007G209000 Sobic001G130700--Sobic007G209000 Sobic005G072400 Sobic005G072400 Sobic001G130700--Sobic005G072400 Sobic001G384600 Sobic001G384600 Sobic001G130700--Sobic001G384600 Sobic006G203200 Sobic006G203200 Sobic001G130700--Sobic006G203200 Sobic006G037300 Sobic006G037300 Sobic001G130700--Sobic006G037300 Sobic010G189100 Sobic010G189100 Sobic003G022200--Sobic010G189100 Sobic003G022200--Sobic001G130700 Sobic007G078300 Sobic007G078300 Sobic003G022200--Sobic007G078300 Sobic003G035500 Sobic003G035500 Sobic003G022200--Sobic003G035500 Sobic001G041400 Sobic001G041400 Sobic003G022200--Sobic001G041400 Sobic003G022200--Sobic002G253600 Sobic002G016900 Sobic002G016900 Sobic003G022200--Sobic002G016900 Sobic006G278200 Sobic006G278200 Sobic003G022200--Sobic006G278200 Sobic001G033400 Sobic001G033400 Sobic003G022200--Sobic001G033400 Sobic006G126600 Sobic006G126600 Sobic009G257500--Sobic006G126600 Sobic009G032200 Sobic009G032200 Sobic009G257500--Sobic009G032200 Sobic008G045800 Sobic008G045800 Sobic009G257500--Sobic008G045800 Sobic003G415100 Sobic003G415100 Sobic009G257500--Sobic003G415100 Sobic008G056200 Sobic008G056200 Sobic009G257500--Sobic008G056200 Sobic009G257500--Sobic010G189100 Sobic010G236200 Sobic010G236200 Sobic009G257500--Sobic010G236200 Sobic009G257500--Sobic008G156200 Sobic010G262900 Sobic010G262900 Sobic009G257500--Sobic010G262900 Sobic010G207400 Sobic010G207400 Sobic008G156200--Sobic010G207400 Sobic002G247300 Sobic002G247300 Sobic008G156200--Sobic002G247300 Sobic008G156200--Sobic003G035500 Sobic004G075700 Sobic004G075700 Sobic008G156200--Sobic004G075700 Sobic005G131800 Sobic005G131800 Sobic008G156200--Sobic005G131800 Sobic003G412200 Sobic003G412200 Sobic008G156200--Sobic003G412200 Sobic010G112700 Sobic010G112700 Sobic008G156200--Sobic010G112700 Sobic008G156200--Sobic002G016900 Sobic004G038900 Sobic004G038900 Sobic008G156200--Sobic004G038900 Sobic002G253600--Sobic005G072400 Sobic002G253600--Sobic002G016900 Sobic003G244700 Sobic003G244700 Sobic002G253600--Sobic003G244700 Sobic009G126800 Sobic009G126800 Sobic002G253600--Sobic009G126800 Sobic002G253600--Sobic006G203200 Sobic002G253600--Sobic008G156200 Sobic002G253600--Sobic006G278200 Sobic002G253600--Sobic003G022200 Sobic002G253600--Sobic003G415100 Sobic007G209000--Sobic001G130700 Sobic007G209000--Sobic010G189100 Sobic007G209000--Sobic003G022200 Sobic007G209000--Sobic007G078300 Sobic007G209000--Sobic006G126600 Sobic010G270800 Sobic010G270800 Sobic007G209000--Sobic010G270800 Sobic008G169800 Sobic008G169800 Sobic007G209000--Sobic008G169800 Sobic009G194700 Sobic009G194700 Sobic007G209000--Sobic009G194700 Sobic003G146300 Sobic003G146300 Sobic007G209000--Sobic003G146300 Sobic005G072400--Sobic006G278200 Sobic005G072400--Sobic002G253600 Sobic005G198200 Sobic005G198200 Sobic005G072400--Sobic005G198200 Sobic003G343600 Sobic003G343600 Sobic005G072400--Sobic003G343600 Sobic009G137900 Sobic009G137900 Sobic005G072400--Sobic009G137900 Sobic001G230500 Sobic001G230500 Sobic005G072400--Sobic001G230500 Sobic005G072400--Sobic003G415100 Sobic002G159200 Sobic002G159200 Sobic005G072400--Sobic002G159200 Sobic006G261100 Sobic006G261100 Sobic005G072400--Sobic006G261100 Sobic005G177900 Sobic005G177900 Sobic001G384600--Sobic005G177900 Sobic006G022500 Sobic006G022500 Sobic001G384600--Sobic006G022500 Sobic004G148600 Sobic004G148600 Sobic001G384600--Sobic004G148600 Sobic001G228400 Sobic001G228400 Sobic001G384600--Sobic001G228400 Sobic001G384600--Sobic009G194700 Sobic001G384600--Sobic003G244700 Sobic001G384600--Sobic006G126600 Sobic006G022400 Sobic006G022400 Sobic001G384600--Sobic006G022400 Sobic004G052800 Sobic004G052800 Sobic001G384600--Sobic004G052800 Sobic006G203200--Sobic002G016900 Sobic006G203200--Sobic003G244700 Sobic006G203200--Sobic002G253600 Sobic006G120400 Sobic006G120400 Sobic006G203200--Sobic006G120400 Sobic002G341100 Sobic002G341100 Sobic006G203200--Sobic002G341100 Sobic006G203200--Sobic001G130700 Sobic006G203200--Sobic008G156200 Sobic009G242800 Sobic009G242800 Sobic006G203200--Sobic009G242800 Sobic002G002500 Sobic002G002500 Sobic006G203200--Sobic002G002500 Sobic002G201000 Sobic002G201000 Sobic006G037300--Sobic002G201000 Sobic005G030400 Sobic005G030400 Sobic006G037300--Sobic005G030400 Sobic009G034500 Sobic009G034500 Sobic006G037300--Sobic009G034500 Sobic006G037300--Sobic001G130700 Sobic006G037300--Sobic003G022200 Sobic001G482300 Sobic001G482300 Sobic006G037300--Sobic001G482300 Sobic001G306700 Sobic001G306700 Sobic006G037300--Sobic001G306700 Sobic007G000400 Sobic007G000400 Sobic006G037300--Sobic007G000400 Sobic006G003951 Sobic006G003951 Sobic006G037300--Sobic006G003951
Octagon: transcription factors


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