Gene annotation
Transcriptome id Sobic.004G250900.3,Sobic.004G250900.4,Sobic.004G250900.2
Synonym ALDH2B4, Sb04g029040, ALDH2A, ALDH2
Functional annotation SAG (Senescence-associated gene): up-regulated gene during dark-induced senescence. (PubMedID : 27586543)
aldehyde dehydrogenase, putative, expressed
UniProt A0A194YRH0 , Q8LST5
Pfam PF00171
Panther DB PTHR11699 PTHR11699:SF180
NCBI CDD -
KEGG Orthology K00128; aldehyde dehydrogenase (NAD+)
Gene Ontology GO:0016491; oxidoreductase activity GO:0008152metabolic process


Orthologs (automatic annotation)
TAIR AT3G48000 : aldehyde dehydrogenase 2B4,aldehyde dehydrogenase 2B7
RAP-DB (Rice) LOC_Os02g49720.3 : aldehyde dehydrogenase, putative, expressed
MaizeGDB (Corn) Zm00025a038433 , Zm00025a032635 , Zm00025a028547
Brachypodium -
Barley HORVU6Hr1G072830.1 , HORVU6Hr1G072830.2 , HORVU6Hr1G072830.3
Wheat TraesCS6B02G321400 , TraesCS6D02G272400
Populus -


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cDNA sequences
Sobic.004G250900


Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.004G028800 expressed protein K19042: E3 ubiquitin-protein ligase BOI and related proteins
2 Sobic.001G488200 aminotransferase, putative, expressed K00827: alanine-glyoxylate transaminase / (R)-3-amino-2-methylpropionate-pyruvate transaminase
3 Sobic.007G097700 DUF593 domain containing protein, expressed -
4 Sobic.004G345100 expressed protein -
5 Sobic.002G276900 transcription initiation factor IIB, putative, expressed K03124: TFIIB, GTF2B, SUA7, transcription initiation factor TFIIB
6 Sobic.004G256200 B-box (BBX) protein(PubMedID : 30626335)@SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@CCT/B-box zinc finger protein, putative, expressed -
7 Sobic.006G096300 oxidoreductase, aldo/keto reductase family protein, putative, expressed -
8 Sobic.009G025100 transporter, putative, expressed -
9 Sobic.009G009800 expressed protein -
10 Sobic.001G033400 protein kinase domain containing protein, expressed -
11 Sobic.004G155300 SAG (Senescence-associated gene): up-regulated gene during salt-induced senescence.(PubMedID : 27586543)@expressed protein -
12 Sobic.006G244500 nuclease PA3, putative, expressed -
13 Sobic.002G121000 SAG (Senescence-associated gene): up-regulated gene during dark-induced senescence.(PubMedID : 27586543)@expressed protein -
14 Sobic.002G103700 - -
15 Sobic.004G318400 MTD1, putative, expressed -
16 Sobic.006G099800 signal recognition particle 19 kDa protein, putative, expressed K03105: signal recognition particle subunit SRP19
17 Sobic.005G158901 - -
18 Sobic.001G170500 expressed protein -
19 Sobic.003G062200 transcription factor HBP-1b, putative, expressed -
20 Sobic.003G035500 hexokinase, putative, expressed K00844: hexokinase


Gene co-expression network
sample Sobic004G250900 Sobic004G250900 Sobic004G028800 Sobic004G028800 Sobic004G250900--Sobic004G028800 Sobic001G488200 Sobic001G488200 Sobic004G250900--Sobic001G488200 Sobic007G097700 Sobic007G097700 Sobic004G250900--Sobic007G097700 Sobic004G345100 Sobic004G345100 Sobic004G250900--Sobic004G345100 Sobic002G276900 Sobic002G276900 Sobic004G250900--Sobic002G276900 Sobic004G256200 Sobic004G256200 Sobic004G250900--Sobic004G256200 Sobic006G096300 Sobic006G096300 Sobic004G250900--Sobic006G096300 Sobic009G025100 Sobic009G025100 Sobic004G250900--Sobic009G025100 Sobic009G009800 Sobic009G009800 Sobic004G250900--Sobic009G009800 Sobic006G244500 Sobic006G244500 Sobic004G028800--Sobic006G244500 Sobic004G028800--Sobic001G488200 Sobic006G151001 Sobic006G151001 Sobic004G028800--Sobic006G151001 Sobic004G155300 Sobic004G155300 Sobic004G028800--Sobic004G155300 Sobic003G062200 Sobic003G062200 Sobic004G028800--Sobic003G062200 Sobic004G028800--Sobic004G345100 Sobic004G028800--Sobic009G009800 Sobic002G359900 Sobic002G359900 Sobic004G028800--Sobic002G359900 Sobic006G066600 Sobic006G066600 Sobic004G028800--Sobic006G066600 Sobic001G488200--Sobic006G244500 Sobic001G488200--Sobic006G151001 Sobic001G488200--Sobic004G028800 Sobic001G488200--Sobic009G009800 Sobic001G488200--Sobic003G062200 Sobic006G206500 Sobic006G206500 Sobic001G488200--Sobic006G206500 Sobic005G158901 Sobic005G158901 Sobic001G488200--Sobic005G158901 Sobic003G421900 Sobic003G421900 Sobic001G488200--Sobic003G421900 Sobic001G488200--Sobic006G066600 Sobic007G097700--Sobic004G250900 Sobic007G097700--Sobic004G028800 Sobic007G097700--Sobic004G256200 Sobic007G097700--Sobic002G276900 Sobic007G097700--Sobic001G488200 Sobic004G225800 Sobic004G225800 Sobic007G097700--Sobic004G225800 Sobic007G097700--Sobic006G096300 Sobic001G218200 Sobic001G218200 Sobic007G097700--Sobic001G218200 Sobic009G100300 Sobic009G100300 Sobic007G097700--Sobic009G100300 Sobic006G072400 Sobic006G072400 Sobic004G345100--Sobic006G072400 Sobic004G345100--Sobic004G028800 Sobic003G004500 Sobic003G004500 Sobic004G345100--Sobic003G004500 Sobic006G261100 Sobic006G261100 Sobic004G345100--Sobic006G261100 Sobic004G345100--Sobic002G359900 Sobic002G252900 Sobic002G252900 Sobic004G345100--Sobic002G252900 Sobic006G120800 Sobic006G120800 Sobic004G345100--Sobic006G120800 Sobic001G458200 Sobic001G458200 Sobic004G345100--Sobic001G458200 Sobic003G415100 Sobic003G415100 Sobic004G345100--Sobic003G415100 Sobic002G276900--Sobic006G261100 Sobic006G099800 Sobic006G099800 Sobic002G276900--Sobic006G099800 Sobic002G276900--Sobic009G100300 Sobic003G416600 Sobic003G416600 Sobic002G276900--Sobic003G416600 Sobic002G121000 Sobic002G121000 Sobic002G276900--Sobic002G121000 Sobic009G034400 Sobic009G034400 Sobic002G276900--Sobic009G034400 Sobic001G512900 Sobic001G512900 Sobic002G276900--Sobic001G512900 Sobic010G253100 Sobic010G253100 Sobic002G276900--Sobic010G253100 Sobic002G179500 Sobic002G179500 Sobic002G276900--Sobic002G179500 Sobic002G341100 Sobic002G341100 Sobic004G256200--Sobic002G341100 Sobic004G256200--Sobic006G261100 Sobic001G116100 Sobic001G116100 Sobic004G256200--Sobic001G116100 Sobic004G256200--Sobic004G250900 Sobic006G120400 Sobic006G120400 Sobic004G256200--Sobic006G120400 Sobic004G256200--Sobic001G218200 Sobic004G256200--Sobic002G276900 Sobic008G073000 Sobic008G073000 Sobic004G256200--Sobic008G073000 Sobic002G095700 Sobic002G095700 Sobic004G256200--Sobic002G095700 Sobic007G034600 Sobic007G034600 Sobic006G096300--Sobic007G034600 Sobic004G067900 Sobic004G067900 Sobic006G096300--Sobic004G067900 Sobic001G106400 Sobic001G106400 Sobic006G096300--Sobic001G106400 Sobic006G096300--Sobic002G359900 Sobic004G102900 Sobic004G102900 Sobic006G096300--Sobic004G102900 Sobic006G096300--Sobic001G488200 Sobic006G096300--Sobic004G028800 Sobic003G031200 Sobic003G031200 Sobic006G096300--Sobic003G031200 Sobic006G096300--Sobic004G250900 Sobic001G170500 Sobic001G170500 Sobic009G025100--Sobic001G170500 Sobic008G039700 Sobic008G039700 Sobic009G025100--Sobic008G039700 Sobic010G037200 Sobic010G037200 Sobic009G025100--Sobic010G037200 Sobic010G168500 Sobic010G168500 Sobic009G025100--Sobic010G168500 Sobic008G081700 Sobic008G081700 Sobic009G025100--Sobic008G081700 Sobic009G071600 Sobic009G071600 Sobic009G025100--Sobic009G071600 Sobic010G227400 Sobic010G227400 Sobic009G025100--Sobic010G227400 Sobic008G088450 Sobic008G088450 Sobic009G025100--Sobic008G088450 Sobic002G338600 Sobic002G338600 Sobic009G025100--Sobic002G338600 Sobic009G009800--Sobic006G244500 Sobic010G031600 Sobic010G031600 Sobic009G009800--Sobic010G031600 Sobic003G376000 Sobic003G376000 Sobic009G009800--Sobic003G376000 Sobic001G277800 Sobic001G277800 Sobic009G009800--Sobic001G277800 Sobic010G136300 Sobic010G136300 Sobic009G009800--Sobic010G136300 Sobic009G009800--Sobic005G158901 Sobic008G037000 Sobic008G037000 Sobic009G009800--Sobic008G037000 Sobic007G049400 Sobic007G049400 Sobic009G009800--Sobic007G049400 Sobic005G112066 Sobic005G112066 Sobic009G009800--Sobic005G112066
Octagon: transcription factors


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