Gene annotation
Transcriptome id Sobic.007G097700.12,Sobic.007G097700.10,Sobic.007G097700.9,Sobic.007G097700.1,Sobic.007G097700.5,Sobic.007G097700.8,Sobic.007G097700.4,Sobic.007G097700.3,Sobic.007G097700.7,Sobic.007G097700.6,Sobic.007G097700.11
Synonym Sb07g010190
Functional annotation DUF593 domain containing protein, expressed
UniProt A0A1B6PGT9 , A0A1Z5R8Z6 , A0A1B6PGS1 , A0A1B6PH38
Pfam PF04576
Panther DB PTHR31422 PTHR31422:SF4
NCBI CDD -
KEGG Orthology -
Gene Ontology -


Orthologs (automatic annotation)
TAIR AT3G54740 : Protein of unknown function, DUF593
RAP-DB (Rice) LOC_Os08g16790.1 : DUF593 domain containing protein, expressed
MaizeGDB (Corn) Zm00025a054608
Brachypodium KQJ95855 , PNT67001 , KQJ95856 , KQJ95854
Barley -
Wheat -
Populus -


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Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.004G250900 SAG (Senescence-associated gene): up-regulated gene during dark-induced senescence.(PubMedID : 27586543)@aldehyde dehydrogenase, putative, expressed K00128: aldehyde dehydrogenase (NAD+)
2 Sobic.004G028800 expressed protein K19042: E3 ubiquitin-protein ligase BOI and related proteins
3 Sobic.004G256200 B-box (BBX) protein(PubMedID : 30626335)@SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@CCT/B-box zinc finger protein, putative, expressed -
4 Sobic.002G276900 transcription initiation factor IIB, putative, expressed K03124: TFIIB, GTF2B, SUA7, transcription initiation factor TFIIB
5 Sobic.001G488200 aminotransferase, putative, expressed K00827: alanine-glyoxylate transaminase / (R)-3-amino-2-methylpropionate-pyruvate transaminase
6 Sobic.004G225800 GEM, putative, expressed -
7 Sobic.006G096300 oxidoreductase, aldo/keto reductase family protein, putative, expressed -
8 Sobic.001G218200 expressed protein -
9 Sobic.009G100300 expressed protein -
10 Sobic.003G062200 transcription factor HBP-1b, putative, expressed -
11 Sobic.002G260800 SAG (Senescence-associated gene): up-regulated gene during dark-induced senescence.(PubMedID : 27586543)@Not investigated(PubMedID : 23766026)@AP2 domain containing protein, expressed -
12 Sobic.006G151001 - -
13 Sobic.006G244500 nuclease PA3, putative, expressed -
14 Sobic.002G121000 SAG (Senescence-associated gene): up-regulated gene during dark-induced senescence.(PubMedID : 27586543)@expressed protein -
15 Sobic.002G046600 CAF1 family ribonuclease containing protein, putative, expressed K12581: CNOT7_8, CAF1, CCR4-NOT transcription complex subunit 7/8
16 Sobic.009G009800 expressed protein -
17 Sobic.010G152200 avr9/Cf-9 rapidly elicited protein 194, putative, expressed -
18 Sobic.001G310700 protein kinase family protein, putative, expressed K14500: BR-signaling kinase
19 Sobic.003G000500 BRASSINOSTEROID INSENSITIVE 1 precursor, putative, expressed -
20 Sobic.006G132400 "SAG (Senescence-associated gene): differentially expressed gene during developmental, salt-induced, and dark-induced senescence."(PubMedID : 27586543)@CHIT3 - Chitinase family protein precursor, expressed K01183: chitinase


Gene co-expression network
sample Sobic007G097700 Sobic007G097700 Sobic004G250900 Sobic004G250900 Sobic007G097700--Sobic004G250900 Sobic004G028800 Sobic004G028800 Sobic007G097700--Sobic004G028800 Sobic004G256200 Sobic004G256200 Sobic007G097700--Sobic004G256200 Sobic002G276900 Sobic002G276900 Sobic007G097700--Sobic002G276900 Sobic001G488200 Sobic001G488200 Sobic007G097700--Sobic001G488200 Sobic004G225800 Sobic004G225800 Sobic007G097700--Sobic004G225800 Sobic006G096300 Sobic006G096300 Sobic007G097700--Sobic006G096300 Sobic001G218200 Sobic001G218200 Sobic007G097700--Sobic001G218200 Sobic009G100300 Sobic009G100300 Sobic007G097700--Sobic009G100300 Sobic004G250900--Sobic004G028800 Sobic004G250900--Sobic001G488200 Sobic004G250900--Sobic007G097700 Sobic004G345100 Sobic004G345100 Sobic004G250900--Sobic004G345100 Sobic004G250900--Sobic002G276900 Sobic004G250900--Sobic004G256200 Sobic004G250900--Sobic006G096300 Sobic009G025100 Sobic009G025100 Sobic004G250900--Sobic009G025100 Sobic009G009800 Sobic009G009800 Sobic004G250900--Sobic009G009800 Sobic006G244500 Sobic006G244500 Sobic004G028800--Sobic006G244500 Sobic004G028800--Sobic001G488200 Sobic006G151001 Sobic006G151001 Sobic004G028800--Sobic006G151001 Sobic004G155300 Sobic004G155300 Sobic004G028800--Sobic004G155300 Sobic003G062200 Sobic003G062200 Sobic004G028800--Sobic003G062200 Sobic004G028800--Sobic004G345100 Sobic004G028800--Sobic009G009800 Sobic002G359900 Sobic002G359900 Sobic004G028800--Sobic002G359900 Sobic006G066600 Sobic006G066600 Sobic004G028800--Sobic006G066600 Sobic002G341100 Sobic002G341100 Sobic004G256200--Sobic002G341100 Sobic006G261100 Sobic006G261100 Sobic004G256200--Sobic006G261100 Sobic001G116100 Sobic001G116100 Sobic004G256200--Sobic001G116100 Sobic004G256200--Sobic004G250900 Sobic006G120400 Sobic006G120400 Sobic004G256200--Sobic006G120400 Sobic004G256200--Sobic001G218200 Sobic004G256200--Sobic002G276900 Sobic008G073000 Sobic008G073000 Sobic004G256200--Sobic008G073000 Sobic002G095700 Sobic002G095700 Sobic004G256200--Sobic002G095700 Sobic002G276900--Sobic006G261100 Sobic006G099800 Sobic006G099800 Sobic002G276900--Sobic006G099800 Sobic002G276900--Sobic009G100300 Sobic003G416600 Sobic003G416600 Sobic002G276900--Sobic003G416600 Sobic002G121000 Sobic002G121000 Sobic002G276900--Sobic002G121000 Sobic009G034400 Sobic009G034400 Sobic002G276900--Sobic009G034400 Sobic001G512900 Sobic001G512900 Sobic002G276900--Sobic001G512900 Sobic010G253100 Sobic010G253100 Sobic002G276900--Sobic010G253100 Sobic002G179500 Sobic002G179500 Sobic002G276900--Sobic002G179500 Sobic001G488200--Sobic006G244500 Sobic001G488200--Sobic006G151001 Sobic001G488200--Sobic004G028800 Sobic001G488200--Sobic009G009800 Sobic001G488200--Sobic003G062200 Sobic006G206500 Sobic006G206500 Sobic001G488200--Sobic006G206500 Sobic005G158901 Sobic005G158901 Sobic001G488200--Sobic005G158901 Sobic003G421900 Sobic003G421900 Sobic001G488200--Sobic003G421900 Sobic001G488200--Sobic006G066600 Sobic002G419500 Sobic002G419500 Sobic004G225800--Sobic002G419500 Sobic004G225800--Sobic001G488200 Sobic004G225800--Sobic006G244500 Sobic004G225800--Sobic003G062200 Sobic004G067900 Sobic004G067900 Sobic004G225800--Sobic004G067900 Sobic002G393600 Sobic002G393600 Sobic004G225800--Sobic002G393600 Sobic002G290500 Sobic002G290500 Sobic004G225800--Sobic002G290500 Sobic004G225800--Sobic004G028800 Sobic004G225800--Sobic007G097700 Sobic007G034600 Sobic007G034600 Sobic006G096300--Sobic007G034600 Sobic006G096300--Sobic004G067900 Sobic001G106400 Sobic001G106400 Sobic006G096300--Sobic001G106400 Sobic006G096300--Sobic002G359900 Sobic004G102900 Sobic004G102900 Sobic006G096300--Sobic004G102900 Sobic006G096300--Sobic001G488200 Sobic006G096300--Sobic004G028800 Sobic003G031200 Sobic003G031200 Sobic006G096300--Sobic003G031200 Sobic006G096300--Sobic004G250900 Sobic001G218200--Sobic001G116100 Sobic001G218200--Sobic006G261100 Sobic005G180800 Sobic005G180800 Sobic001G218200--Sobic005G180800 Sobic002G362300 Sobic002G362300 Sobic001G218200--Sobic002G362300 Sobic002G103700 Sobic002G103700 Sobic001G218200--Sobic002G103700 Sobic001G218200--Sobic004G256200 Sobic005G030300 Sobic005G030300 Sobic001G218200--Sobic005G030300 Sobic002G347700 Sobic002G347700 Sobic001G218200--Sobic002G347700 Sobic007G155900 Sobic007G155900 Sobic001G218200--Sobic007G155900 Sobic009G100300--Sobic002G276900 Sobic007G038800 Sobic007G038800 Sobic009G100300--Sobic007G038800 Sobic009G100300--Sobic009G034400 Sobic009G100300--Sobic002G359900 Sobic002G068300 Sobic002G068300 Sobic009G100300--Sobic002G068300 Sobic009G036900 Sobic009G036900 Sobic009G100300--Sobic009G036900 Sobic009G100300--Sobic006G099800 Sobic009G100300--Sobic002G121000 Sobic009G100300--Sobic010G253100
Octagon: transcription factors


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