Gene annotation
Transcriptome id Sobic.005G142000.1
Synonym Sb05g020730
Functional annotation expressed protein
UniProt C6JRT7 , A0A1B6PSE6 , A0A125QUJ0
Pfam -
Panther DB PTHR33157 PTHR33157:SF3
NCBI CDD -
KEGG Orthology -
Gene Ontology -


Orthologs (automatic annotation)
TAIR -
RAP-DB (Rice) LOC_Os11g41770.1 : expressed protein
MaizeGDB (Corn) -
Brachypodium -
Barley -
Wheat -
Populus -


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Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.008G165100 G-patch domain containing protein, putative, expressed K13103: tuftelin-interacting protein 11
2 Sobic.004G256200 B-box (BBX) protein(PubMedID : 30626335)@SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@CCT/B-box zinc finger protein, putative, expressed -
3 Sobic.002G351400 thaumatin, putative, expressed -
4 Sobic.006G120400 no apical meristem protein, putative, expressed -
5 Sobic.002G341100 bromodomain domain containing protein, expressed -
6 Sobic.001G418400 expressed high in CK60 (an inefficient nitrogen user)(PubMedID : 28697783)@cadmium tolerance factor, putative, expressed -
7 Sobic.003G244700 SAG (Senescence-associated gene): up-regulated gene during dark-induced senescence.(PubMedID : 27586543)@pyruvate kinase, putative, expressed K00873: PK, pyruvate kinase
8 Sobic.002G019600 OsFBX234 - F-box domain containing protein, expressed -
9 Sobic.006G123900 chloroplastic group IIA intron splicing facilitator CRS1, chloroplast precursor, putative, expressed -
10 Sobic.002G016900 OsFBD13 - F-box and FBD domain containing protein, expressed -
11 Sobic.007G155900 bZIP transcription factor, putative, expressed K14432: ABA responsive element binding factor
12 Sobic.005G059100 bromodomain domain containing protein, expressed -
13 Sobic.006G203200 Disease resistance/zinc finger/chromosome condensation-like region protein, putative, expressed -
14 Sobic.007G043500 DNA topoisomerase 1, putative, expressed K03163: DNA topoisomerase I
15 Sobic.002G067800 - -
16 Sobic.002G095700 C2-BTB1 - Bric-a-Brac, Tramtrack, Broad Complex BTB domain with C2 subfamily conserved sequence, expressed K10523: speckle-type POZ protein
17 Sobic.001G041400 PAPA-1-like conserved region family protein, expressed -
18 Sobic.003G022200 DUF538 domain containing protein, putative, expressed -
19 Sobic.008G106000 eukaryotic translation initiation factor 5B, putative, expressed K03243: translation initiation factor 5B
20 Sobic.002G059866 - -


Gene co-expression network
sample Sobic005G142000 Sobic005G142000 Sobic008G165100 Sobic008G165100 Sobic005G142000--Sobic008G165100 Sobic004G256200 Sobic004G256200 Sobic005G142000--Sobic004G256200 Sobic002G351400 Sobic002G351400 Sobic005G142000--Sobic002G351400 Sobic006G120400 Sobic006G120400 Sobic005G142000--Sobic006G120400 Sobic002G341100 Sobic002G341100 Sobic005G142000--Sobic002G341100 Sobic001G418400 Sobic001G418400 Sobic005G142000--Sobic001G418400 Sobic003G244700 Sobic003G244700 Sobic005G142000--Sobic003G244700 Sobic002G019600 Sobic002G019600 Sobic005G142000--Sobic002G019600 Sobic006G123900 Sobic006G123900 Sobic005G142000--Sobic006G123900 Sobic002G067800 Sobic002G067800 Sobic008G165100--Sobic002G067800 Sobic010G194700 Sobic010G194700 Sobic008G165100--Sobic010G194700 Sobic008G073000 Sobic008G073000 Sobic008G165100--Sobic008G073000 Sobic005G030300 Sobic005G030300 Sobic008G165100--Sobic005G030300 Sobic002G095700 Sobic002G095700 Sobic008G165100--Sobic002G095700 Sobic008G165100--Sobic006G123900 Sobic002G151600 Sobic002G151600 Sobic008G165100--Sobic002G151600 Sobic003G433500 Sobic003G433500 Sobic008G165100--Sobic003G433500 Sobic002G045400 Sobic002G045400 Sobic008G165100--Sobic002G045400 Sobic004G256200--Sobic002G341100 Sobic006G261100 Sobic006G261100 Sobic004G256200--Sobic006G261100 Sobic001G116100 Sobic001G116100 Sobic004G256200--Sobic001G116100 Sobic004G250900 Sobic004G250900 Sobic004G256200--Sobic004G250900 Sobic004G256200--Sobic006G120400 Sobic001G218200 Sobic001G218200 Sobic004G256200--Sobic001G218200 Sobic002G276900 Sobic002G276900 Sobic004G256200--Sobic002G276900 Sobic004G256200--Sobic008G073000 Sobic004G256200--Sobic002G095700 Sobic007G078300 Sobic007G078300 Sobic002G351400--Sobic007G078300 Sobic003G174200 Sobic003G174200 Sobic002G351400--Sobic003G174200 Sobic003G045501 Sobic003G045501 Sobic002G351400--Sobic003G045501 Sobic010G152200 Sobic010G152200 Sobic002G351400--Sobic010G152200 Sobic003G389400 Sobic003G389400 Sobic002G351400--Sobic003G389400 Sobic007G084800 Sobic007G084800 Sobic002G351400--Sobic007G084800 Sobic006G132400 Sobic006G132400 Sobic002G351400--Sobic006G132400 Sobic009G009900 Sobic009G009900 Sobic002G351400--Sobic009G009900 Sobic008G013000 Sobic008G013000 Sobic002G351400--Sobic008G013000 Sobic009G242800 Sobic009G242800 Sobic006G120400--Sobic009G242800 Sobic006G120400--Sobic002G341100 Sobic006G203200 Sobic006G203200 Sobic006G120400--Sobic006G203200 Sobic007G155900 Sobic007G155900 Sobic006G120400--Sobic007G155900 Sobic008G015700 Sobic008G015700 Sobic006G120400--Sobic008G015700 Sobic008G106000 Sobic008G106000 Sobic006G120400--Sobic008G106000 Sobic007G043500 Sobic007G043500 Sobic006G120400--Sobic007G043500 Sobic006G120400--Sobic004G256200 Sobic002G001600 Sobic002G001600 Sobic006G120400--Sobic002G001600 Sobic001G033400 Sobic001G033400 Sobic002G341100--Sobic001G033400 Sobic001G041400 Sobic001G041400 Sobic002G341100--Sobic001G041400 Sobic006G278200 Sobic006G278200 Sobic002G341100--Sobic006G278200 Sobic002G341100--Sobic002G095700 Sobic002G341100--Sobic002G067800 Sobic003G035500 Sobic003G035500 Sobic002G341100--Sobic003G035500 Sobic002G341100--Sobic008G073000 Sobic002G341100--Sobic004G256200 Sobic002G341100--Sobic006G120400 Sobic005G060633 Sobic005G060633 Sobic001G418400--Sobic005G060633 Sobic001G418400--Sobic004G256200 Sobic001G418400--Sobic005G142000 Sobic001G418400--Sobic004G250900 Sobic002G016900 Sobic002G016900 Sobic001G418400--Sobic002G016900 Sobic009G022100 Sobic009G022100 Sobic001G418400--Sobic009G022100 Sobic001G418400--Sobic002G019600 Sobic001G418400--Sobic006G120400 Sobic001G418400--Sobic003G035500 Sobic003G244700--Sobic006G203200 Sobic002G253600 Sobic002G253600 Sobic003G244700--Sobic002G253600 Sobic003G244700--Sobic002G019600 Sobic002G050500 Sobic002G050500 Sobic003G244700--Sobic002G050500 Sobic002G362300 Sobic002G362300 Sobic003G244700--Sobic002G362300 Sobic001G371000 Sobic001G371000 Sobic003G244700--Sobic001G371000 Sobic010G235500 Sobic010G235500 Sobic003G244700--Sobic010G235500 Sobic003G244700--Sobic002G016900 Sobic001G384600 Sobic001G384600 Sobic003G244700--Sobic001G384600 Sobic004G005400 Sobic004G005400 Sobic002G019600--Sobic004G005400 Sobic002G019600--Sobic003G244700 Sobic002G062300 Sobic002G062300 Sobic002G019600--Sobic002G062300 Sobic001G261480 Sobic001G261480 Sobic002G019600--Sobic001G261480 Sobic005G139800 Sobic005G139800 Sobic002G019600--Sobic005G139800 Sobic003G031750 Sobic003G031750 Sobic002G019600--Sobic003G031750 Sobic005G117801 Sobic005G117801 Sobic002G019600--Sobic005G117801 Sobic009G209800 Sobic009G209800 Sobic002G019600--Sobic009G209800 Sobic008G079100 Sobic008G079100 Sobic002G019600--Sobic008G079100 Sobic006G123900--Sobic008G106000 Sobic006G123900--Sobic002G001600 Sobic005G059100 Sobic005G059100 Sobic006G123900--Sobic005G059100 Sobic002G313300 Sobic002G313300 Sobic006G123900--Sobic002G313300 Sobic006G013500 Sobic006G013500 Sobic006G123900--Sobic006G013500 Sobic008G129700 Sobic008G129700 Sobic006G123900--Sobic008G129700 Sobic006G080300 Sobic006G080300 Sobic006G123900--Sobic006G080300 Sobic007G185900 Sobic007G185900 Sobic006G123900--Sobic007G185900 Sobic006G123900--Sobic002G151600
Octagon: transcription factors


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