Gene annotation
Transcriptome id Sobic.008G155600.1
Synonym
Functional annotation ankyrin-1, putative, expressed
UniProt A0A1Z5R727
Pfam PF00515 PF13414 PF13637 PF12796
Panther DB PTHR22904 PTHR22904:SF351
NCBI CDD KOG4412; 26S proteasome regulatory complex, subunit PSMD10
KEGG Orthology -
Gene Ontology GO:0005515; protein binding


Orthologs (automatic annotation)
TAIR AT3G04710 : ankyrin repeat family protein
RAP-DB (Rice) LOC_Os12g40770.1 : ankyrin-1, putative, expressed
MaizeGDB (Corn) -
Brachypodium -
Barley -
Wheat -
Populus -


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Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.002G019750 - -
2 Sobic.006G223800 ZOS8-01 - C2H2 zinc finger protein, expressed -
3 Sobic.002G019500 OsFBX234 - F-box domain containing protein, expressed -
4 Sobic.005G110421 - -
5 Sobic.001G112000 3,4-dihydroxy-2-butanone kinase, putative, expressed K00863: DAK, triose/dihydroxyacetone kinase / FAD-AMP lyase (cyclizing)
6 Sobic.008G010900 DNA repair protein Rad51, putative, expressed K10872: meiotic recombination protein DMC1
7 Sobic.009G156600 "domain confirmed by Pfam database, expression supported by NCBI EST database, expressed in leaf, flower, stem and root, expression induced by IAA, BR and ABA treatments"(PubMedID : 20528920)@transmembrane amino acid transporter protein, putative, expressed K13946: AUX1, auxin influx carrier (AUX1 LAX family)
8 Sobic.006G212500 - -
9 Sobic.001G510400 cytochrome P450 86A1, putative, expressed -
10 Sobic.003G358200 reticulon domain containing protein, putative, expressed -
11 Sobic.006G249200 expressed protein -
12 Sobic.002G014200 OsFBX209 - F-box domain containing protein, expressed -
13 Sobic.005G202000 expressed protein -
14 Sobic.005G079700 expressed protein -
15 Sobic.002G342100 no apical meristem protein, putative, expressed -
16 Sobic.010G093400 "SAG (Senescence-associated gene): differentially expressed gene during developmental, salt-induced, and dark-induced senescence."(PubMedID : 27586543)@Starch synthesis(PubMedID : 31624872)@Starch Synthase IIa(PubMedID : 21853065)@soluble starch synthase 2-3, chloroplast precursor, putative, expressed K00703: starch synthase
17 Sobic.006G017600 DNA-directed RNA polymerase II subunit RPB9, putative, expressed K03017: RPB9, DNA-directed RNA polymerase II subunit RPB9
18 Sobic.009G159300 expressed protein -
19 Sobic.001G163300 SAG (Senescence-associated gene): up-regulated gene during salt-induced senescence.(PubMedID : 27586543)@zinc finger protein-related, putative, expressed K11968: ariadne-1
20 Sobic.002G103700 - -


Gene co-expression network
sample Sobic008G155600 Sobic008G155600 Sobic002G019750 Sobic002G019750 Sobic008G155600--Sobic002G019750 Sobic006G223800 Sobic006G223800 Sobic008G155600--Sobic006G223800 Sobic002G019500 Sobic002G019500 Sobic008G155600--Sobic002G019500 Sobic005G110421 Sobic005G110421 Sobic008G155600--Sobic005G110421 Sobic001G112000 Sobic001G112000 Sobic008G155600--Sobic001G112000 Sobic008G010900 Sobic008G010900 Sobic008G155600--Sobic008G010900 Sobic009G156600 Sobic009G156600 Sobic008G155600--Sobic009G156600 Sobic006G212500 Sobic006G212500 Sobic008G155600--Sobic006G212500 Sobic001G510400 Sobic001G510400 Sobic008G155600--Sobic001G510400 Sobic002G019750--Sobic002G019500 Sobic007G070500 Sobic007G070500 Sobic002G019750--Sobic007G070500 Sobic001G489150 Sobic001G489150 Sobic002G019750--Sobic001G489150 Sobic006G199700 Sobic006G199700 Sobic002G019750--Sobic006G199700 Sobic002G019750--Sobic006G223800 Sobic002G019750--Sobic008G155600 Sobic005G170700 Sobic005G170700 Sobic002G019750--Sobic005G170700 Sobic002G106000 Sobic002G106000 Sobic002G019750--Sobic002G106000 Sobic005G064700 Sobic005G064700 Sobic002G019750--Sobic005G064700 Sobic006G223800--Sobic008G010900 Sobic006G017600 Sobic006G017600 Sobic006G223800--Sobic006G017600 Sobic002G014200 Sobic002G014200 Sobic006G223800--Sobic002G014200 Sobic006G223800--Sobic005G110421 Sobic006G223800--Sobic002G019500 Sobic006G223800--Sobic002G019750 Sobic006G223800--Sobic008G155600 Sobic010G093400 Sobic010G093400 Sobic006G223800--Sobic010G093400 Sobic006G223800--Sobic001G112000 Sobic002G019500--Sobic002G019750 Sobic002G019500--Sobic006G223800 Sobic002G019500--Sobic008G155600 Sobic002G019500--Sobic002G106000 Sobic002G019500--Sobic006G212500 Sobic010G153000 Sobic010G153000 Sobic002G019500--Sobic010G153000 Sobic002G059866 Sobic002G059866 Sobic002G019500--Sobic002G059866 Sobic004G313300 Sobic004G313300 Sobic002G019500--Sobic004G313300 Sobic002G019500--Sobic001G489150 Sobic003G281600 Sobic003G281600 Sobic005G110421--Sobic003G281600 Sobic005G110421--Sobic006G223800 Sobic003G197300 Sobic003G197300 Sobic005G110421--Sobic003G197300 Sobic005G110421--Sobic001G510400 Sobic003G358200 Sobic003G358200 Sobic005G110421--Sobic003G358200 Sobic005G110421--Sobic001G112000 Sobic005G110421--Sobic008G010900 Sobic002G185300 Sobic002G185300 Sobic005G110421--Sobic002G185300 Sobic005G110421--Sobic010G093400 Sobic002G342100 Sobic002G342100 Sobic001G112000--Sobic002G342100 Sobic009G128300 Sobic009G128300 Sobic001G112000--Sobic009G128300 Sobic008G031300 Sobic008G031300 Sobic001G112000--Sobic008G031300 Sobic003G227600 Sobic003G227600 Sobic001G112000--Sobic003G227600 Sobic004G211301 Sobic004G211301 Sobic001G112000--Sobic004G211301 Sobic001G509400 Sobic001G509400 Sobic001G112000--Sobic001G509400 Sobic002G331450 Sobic002G331450 Sobic001G112000--Sobic002G331450 Sobic002G182800 Sobic002G182800 Sobic001G112000--Sobic002G182800 Sobic005G096700 Sobic005G096700 Sobic001G112000--Sobic005G096700 Sobic008G010900--Sobic006G223800 Sobic008G010900--Sobic006G017600 Sobic008G010900--Sobic001G112000 Sobic008G010900--Sobic006G199700 Sobic004G101500 Sobic004G101500 Sobic008G010900--Sobic004G101500 Sobic008G010900--Sobic002G342100 Sobic003G409800 Sobic003G409800 Sobic008G010900--Sobic003G409800 Sobic008G010900--Sobic005G110421 Sobic010G090700 Sobic010G090700 Sobic008G010900--Sobic010G090700 Sobic009G000700 Sobic009G000700 Sobic009G156600--Sobic009G000700 Sobic004G155150 Sobic004G155150 Sobic009G156600--Sobic004G155150 Sobic004G310600 Sobic004G310600 Sobic009G156600--Sobic004G310600 Sobic004G245900 Sobic004G245900 Sobic009G156600--Sobic004G245900 Sobic007G089533 Sobic007G089533 Sobic009G156600--Sobic007G089533 Sobic009G000801 Sobic009G000801 Sobic009G156600--Sobic009G000801 Sobic003G078501 Sobic003G078501 Sobic009G156600--Sobic003G078501 Sobic009G216900 Sobic009G216900 Sobic009G156600--Sobic009G216900 Sobic009G156600--Sobic003G227600 Sobic010G087000 Sobic010G087000 Sobic006G212500--Sobic010G087000 Sobic005G202000 Sobic005G202000 Sobic006G212500--Sobic005G202000 Sobic006G212500--Sobic002G019500 Sobic009G205400 Sobic009G205400 Sobic006G212500--Sobic009G205400 Sobic002G103700 Sobic002G103700 Sobic006G212500--Sobic002G103700 Sobic003G009400 Sobic003G009400 Sobic006G212500--Sobic003G009400 Sobic004G148600 Sobic004G148600 Sobic006G212500--Sobic004G148600 Sobic006G250100 Sobic006G250100 Sobic006G212500--Sobic006G250100 Sobic006G212500--Sobic008G155600 Sobic001G510400--Sobic005G110421 Sobic001G510400--Sobic003G197300 Sobic001G510400--Sobic002G185300 Sobic001G510400--Sobic002G342100 Sobic001G510400--Sobic001G112000 Sobic003G304100 Sobic003G304100 Sobic001G510400--Sobic003G304100 Sobic001G510400--Sobic003G409800 Sobic001G510400--Sobic003G358200 Sobic002G225300 Sobic002G225300 Sobic001G510400--Sobic002G225300
Octagon: transcription factors


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