Gene annotation
Transcriptome id Sobic.005G202000.1
Synonym Sb05g025770
Functional annotation expressed protein
UniProt C5Y7C3
Pfam PF12274
Panther DB PTHR33326 PTHR33326:SF2
NCBI CDD -
KEGG Orthology -
Gene Ontology -


Orthologs (automatic annotation)
TAIR -
RAP-DB (Rice) LOC_Os11g42880.1 : expressed protein
MaizeGDB (Corn) -
Brachypodium -
Barley -
Wheat -
Populus -


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Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.001G217300 "domain confirmed by Pfam database, expression supported by NCBI EST database, expression induced by BR treatment"(PubMedID : 20499123)@auxin response factor 18, putative, expressed -
2 Sobic.001G152600 RIO1 family protein, expressed -
3 Sobic.005G172700 expressed protein -
4 Sobic.004G149400 ankyrin, putative, expressed -
5 Sobic.001G137400 ankyrin, putative, expressed -
6 Sobic.003G022900 RNA recognition motif containing protein, putative, expressed K10643: CNOT4, NOT4, CCR4-NOT transcription complex subunit 4
7 Sobic.006G017600 DNA-directed RNA polymerase II subunit RPB9, putative, expressed K03017: RPB9, DNA-directed RNA polymerase II subunit RPB9
8 Sobic.007G127950 - -
9 Sobic.003G049600 CESA1 - cellulose synthase, expressed K10999: cellulose synthase A
10 Sobic.003G091200 seven in absentia protein family domain containing protein, expressed -
11 Sobic.009G042600 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@expressed protein -
12 Sobic.006G212500 - -
13 Sobic.004G218000 SET domain containing protein, expressed -
14 Sobic.001G534400 - -
15 Sobic.007G088800 MBTB21 - Bric-a-Brac, Tramtrack, Broad Complex BTB domain with Meprin and TRAF Homology MATH domain, expressed K10523: speckle-type POZ protein
16 Sobic.002G345800 plastocyanin-like domain containing protein, putative, expressed -
17 Sobic.002G263000 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence./late senescence marker during developmental senescence(PubMedID : 27586543)@expressed protein -
18 Sobic.003G092500 seven in absentia protein family protein, expressed K04506: E3 ubiquitin-protein ligase SIAH1
19 Sobic.004G220200 expressed protein -
20 Sobic.005G032400 ASH-like SPRY domain containing protein, putative, expressed K14964: Set1/Ash2 histone methyltransferase complex subunit ASH2


Gene co-expression network
sample Sobic005G202000 Sobic005G202000 Sobic001G217300 Sobic001G217300 Sobic005G202000--Sobic001G217300 Sobic001G152600 Sobic001G152600 Sobic005G202000--Sobic001G152600 Sobic005G172700 Sobic005G172700 Sobic005G202000--Sobic005G172700 Sobic004G149400 Sobic004G149400 Sobic005G202000--Sobic004G149400 Sobic001G137400 Sobic001G137400 Sobic005G202000--Sobic001G137400 Sobic003G022900 Sobic003G022900 Sobic005G202000--Sobic003G022900 Sobic006G017600 Sobic006G017600 Sobic005G202000--Sobic006G017600 Sobic007G127950 Sobic007G127950 Sobic005G202000--Sobic007G127950 Sobic003G049600 Sobic003G049600 Sobic005G202000--Sobic003G049600 Sobic001G163300 Sobic001G163300 Sobic001G217300--Sobic001G163300 Sobic001G217300--Sobic005G202000 Sobic003G031500 Sobic003G031500 Sobic001G217300--Sobic003G031500 Sobic001G217300--Sobic001G152600 Sobic001G316900 Sobic001G316900 Sobic001G217300--Sobic001G316900 Sobic004G262600 Sobic004G262600 Sobic001G217300--Sobic004G262600 Sobic003G356300 Sobic003G356300 Sobic001G217300--Sobic003G356300 Sobic003G223900 Sobic003G223900 Sobic001G217300--Sobic003G223900 Sobic006G203400 Sobic006G203400 Sobic001G217300--Sobic006G203400 Sobic008G161100 Sobic008G161100 Sobic001G152600--Sobic008G161100 Sobic001G152600--Sobic001G163300 Sobic001G152600--Sobic001G137400 Sobic001G152600--Sobic005G202000 Sobic003G191600 Sobic003G191600 Sobic001G152600--Sobic003G191600 Sobic003G207000 Sobic003G207000 Sobic001G152600--Sobic003G207000 Sobic001G152600--Sobic001G217300 Sobic005G166100 Sobic005G166100 Sobic001G152600--Sobic005G166100 Sobic008G098700 Sobic008G098700 Sobic001G152600--Sobic008G098700 Sobic002G238800 Sobic002G238800 Sobic005G172700--Sobic002G238800 Sobic003G289700 Sobic003G289700 Sobic005G172700--Sobic003G289700 Sobic008G180400 Sobic008G180400 Sobic005G172700--Sobic008G180400 Sobic001G081800 Sobic001G081800 Sobic005G172700--Sobic001G081800 Sobic005G164800 Sobic005G164800 Sobic005G172700--Sobic005G164800 Sobic004G218000 Sobic004G218000 Sobic005G172700--Sobic004G218000 Sobic003G343200 Sobic003G343200 Sobic005G172700--Sobic003G343200 Sobic005G172700--Sobic001G137400 Sobic007G056900 Sobic007G056900 Sobic005G172700--Sobic007G056900 Sobic004G207000 Sobic004G207000 Sobic004G149400--Sobic004G207000 Sobic004G220200 Sobic004G220200 Sobic004G149400--Sobic004G220200 Sobic005G062600 Sobic005G062600 Sobic004G149400--Sobic005G062600 Sobic009G216500 Sobic009G216500 Sobic004G149400--Sobic009G216500 Sobic003G091200 Sobic003G091200 Sobic004G149400--Sobic003G091200 Sobic008G070700 Sobic008G070700 Sobic004G149400--Sobic008G070700 Sobic006G106200 Sobic006G106200 Sobic004G149400--Sobic006G106200 Sobic002G196500 Sobic002G196500 Sobic004G149400--Sobic002G196500 Sobic001G171200 Sobic001G171200 Sobic004G149400--Sobic001G171200 Sobic001G137500 Sobic001G137500 Sobic001G137400--Sobic001G137500 Sobic002G258000 Sobic002G258000 Sobic001G137400--Sobic002G258000 Sobic007G193300 Sobic007G193300 Sobic001G137400--Sobic007G193300 Sobic001G457600 Sobic001G457600 Sobic001G137400--Sobic001G457600 Sobic010G194600 Sobic010G194600 Sobic001G137400--Sobic010G194600 Sobic001G288000 Sobic001G288000 Sobic001G137400--Sobic001G288000 Sobic009G243000 Sobic009G243000 Sobic001G137400--Sobic009G243000 Sobic001G086400 Sobic001G086400 Sobic001G137400--Sobic001G086400 Sobic001G419500 Sobic001G419500 Sobic001G137400--Sobic001G419500 Sobic001G171100 Sobic001G171100 Sobic003G022900--Sobic001G171100 Sobic006G097300 Sobic006G097300 Sobic003G022900--Sobic006G097300 Sobic003G022900--Sobic001G171200 Sobic003G022900--Sobic007G193300 Sobic008G072900 Sobic008G072900 Sobic003G022900--Sobic008G072900 Sobic010G212700 Sobic010G212700 Sobic003G022900--Sobic010G212700 Sobic006G066400 Sobic006G066400 Sobic003G022900--Sobic006G066400 Sobic003G022900--Sobic001G137400 Sobic003G022900--Sobic004G218000 Sobic008G010900 Sobic008G010900 Sobic006G017600--Sobic008G010900 Sobic006G223800 Sobic006G223800 Sobic006G017600--Sobic006G223800 Sobic006G017600--Sobic005G202000 Sobic004G101500 Sobic004G101500 Sobic006G017600--Sobic004G101500 Sobic010G090700 Sobic010G090700 Sobic006G017600--Sobic010G090700 Sobic004G040800 Sobic004G040800 Sobic006G017600--Sobic004G040800 Sobic006G017600--Sobic001G152600 Sobic006G017600--Sobic008G098700 Sobic006G181500 Sobic006G181500 Sobic006G017600--Sobic006G181500 Sobic001G534400 Sobic001G534400 Sobic007G127950--Sobic001G534400 Sobic007G127950--Sobic003G091200 Sobic008G112100 Sobic008G112100 Sobic007G127950--Sobic008G112100 Sobic003G411700 Sobic003G411700 Sobic007G127950--Sobic003G411700 Sobic007G127950--Sobic003G343200 Sobic001G500500 Sobic001G500500 Sobic007G127950--Sobic001G500500 Sobic002G271400 Sobic002G271400 Sobic007G127950--Sobic002G271400 Sobic001G242300 Sobic001G242300 Sobic007G127950--Sobic001G242300 Sobic001G211500 Sobic001G211500 Sobic007G127950--Sobic001G211500 Sobic009G257500 Sobic009G257500 Sobic003G049600--Sobic009G257500 Sobic004G278900 Sobic004G278900 Sobic003G049600--Sobic004G278900 Sobic009G254000 Sobic009G254000 Sobic003G049600--Sobic009G254000 Sobic003G298900 Sobic003G298900 Sobic003G049600--Sobic003G298900 Sobic001G395200 Sobic001G395200 Sobic003G049600--Sobic001G395200 Sobic009G032200 Sobic009G032200 Sobic003G049600--Sobic009G032200 Sobic002G335500 Sobic002G335500 Sobic003G049600--Sobic002G335500 Sobic007G125700 Sobic007G125700 Sobic003G049600--Sobic007G125700 Sobic002G006100 Sobic002G006100 Sobic003G049600--Sobic002G006100
Octagon: transcription factors


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