Gene annotation
Transcriptome id Sobic.002G345800.1
Synonym Sb02g036870
Functional annotation plastocyanin-like domain containing protein, putative, expressed
UniProt C5XC95
Pfam PF02298
Panther DB PTHR33021 PTHR33021:SF21
NCBI CDD -
KEGG Orthology -
Gene Ontology GO:0009055; electron transfer activity


Orthologs (automatic annotation)
TAIR AT5G26330 : Cupredoxin superfamily protein
RAP-DB (Rice) LOC_Os07g38290.1 : plastocyanin-like domain containing protein, putative, expressed
MaizeGDB (Corn) Zm00025a048450
Brachypodium KQK15642
Barley -
Wheat TraesCS2B02G225400 , TraesCS2A02G198000 , TraesCS2D02G206000
Populus -


JBrowse

Open New Page


cDNA sequences
Sobic.002G345800


Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.004G035800 uncharacterized protein At4g06744 precursor, putative, expressed -
2 Sobic.003G191600 expressed protein -
3 Sobic.001G171200 expressed protein -
4 Sobic.006G097300 F-box protein FBW2, putative, expressed -
5 Sobic.004G220200 expressed protein -
6 Sobic.001G116600 inactive receptor kinase At2g26730 precursor, putative, expressed -
7 Sobic.005G166100 transmembrane BAX inhibitor motif-containing protein, putative, expressed K06890: uncharacterized protein
8 Sobic.001G463301 - -
9 Sobic.001G086400 OsMADS34 - MADS-box family gene with MIKCc type-box, expressed -
10 Sobic.002G196500 linker histone H1 and H5 family protein, expressed -
11 Sobic.003G022900 RNA recognition motif containing protein, putative, expressed K10643: CNOT4, NOT4, CCR4-NOT transcription complex subunit 4
12 Sobic.007G033700 OsFBX309 - F-box domain containing protein, expressed -
13 Sobic.001G123300 Os3bglu7 - beta-glucosidase, exo-beta-glucanse, expressed K05350: beta-glucosidase
14 Sobic.001G171100 expressed protein -
15 Sobic.006G228000 glycine-rich protein 2, putative -
16 Sobic.001G382400 TKL_IRAK_CrRLK1L-1.5 - The CrRLK1L-1 subfamily has homology to the CrRLK1L homolog, expressed -
17 Sobic.003G204200 AP2/B3 transcription factor(PubMedID : 27016024)@B3 DNA binding domain containing protein, expressed -
18 Sobic.004G234600 expressed protein -
19 Sobic.010G183800 - K11594: DDX3X, ATP-dependent RNA helicase DDX3X
20 Sobic.001G137400 ankyrin, putative, expressed -


Gene co-expression network
sample Sobic002G345800 Sobic002G345800 Sobic004G035800 Sobic004G035800 Sobic002G345800--Sobic004G035800 Sobic003G191600 Sobic003G191600 Sobic002G345800--Sobic003G191600 Sobic001G171200 Sobic001G171200 Sobic002G345800--Sobic001G171200 Sobic006G097300 Sobic006G097300 Sobic002G345800--Sobic006G097300 Sobic004G220200 Sobic004G220200 Sobic002G345800--Sobic004G220200 Sobic001G116600 Sobic001G116600 Sobic002G345800--Sobic001G116600 Sobic005G166100 Sobic005G166100 Sobic002G345800--Sobic005G166100 Sobic001G463301 Sobic001G463301 Sobic002G345800--Sobic001G463301 Sobic001G086400 Sobic001G086400 Sobic002G345800--Sobic001G086400 Sobic004G035800--Sobic002G345800 Sobic010G183800 Sobic010G183800 Sobic004G035800--Sobic010G183800 Sobic003G204200 Sobic003G204200 Sobic004G035800--Sobic003G204200 Sobic005G163500 Sobic005G163500 Sobic004G035800--Sobic005G163500 Sobic010G255000 Sobic010G255000 Sobic004G035800--Sobic010G255000 Sobic004G035800--Sobic001G171200 Sobic001G101900 Sobic001G101900 Sobic004G035800--Sobic001G101900 Sobic004G035800--Sobic001G463301 Sobic002G237000 Sobic002G237000 Sobic004G035800--Sobic002G237000 Sobic003G207000 Sobic003G207000 Sobic003G191600--Sobic003G207000 Sobic003G191600--Sobic010G183800 Sobic003G092300 Sobic003G092300 Sobic003G191600--Sobic003G092300 Sobic003G191600--Sobic005G166100 Sobic003G191600--Sobic001G463301 Sobic001G459400 Sobic001G459400 Sobic003G191600--Sobic001G459400 Sobic001G158100 Sobic001G158100 Sobic003G191600--Sobic001G158100 Sobic003G300000 Sobic003G300000 Sobic003G191600--Sobic003G300000 Sobic007G033700 Sobic007G033700 Sobic003G191600--Sobic007G033700 Sobic001G171200--Sobic004G220200 Sobic001G171200--Sobic006G097300 Sobic007G128200 Sobic007G128200 Sobic001G171200--Sobic007G128200 Sobic004G234600 Sobic004G234600 Sobic001G171200--Sobic004G234600 Sobic002G121900 Sobic002G121900 Sobic001G171200--Sobic002G121900 Sobic007G193300 Sobic007G193300 Sobic001G171200--Sobic007G193300 Sobic010G194600 Sobic010G194600 Sobic001G171200--Sobic010G194600 Sobic001G171200--Sobic001G086400 Sobic001G457600 Sobic001G457600 Sobic001G171200--Sobic001G457600 Sobic003G381100 Sobic003G381100 Sobic006G097300--Sobic003G381100 Sobic006G097300--Sobic005G166100 Sobic006G097300--Sobic004G234600 Sobic006G097300--Sobic007G193300 Sobic006G097300--Sobic001G171200 Sobic001G216400 Sobic001G216400 Sobic006G097300--Sobic001G216400 Sobic008G072900 Sobic008G072900 Sobic006G097300--Sobic008G072900 Sobic006G097300--Sobic007G128200 Sobic004G281000 Sobic004G281000 Sobic006G097300--Sobic004G281000 Sobic004G220200--Sobic001G171200 Sobic001G137400 Sobic001G137400 Sobic004G220200--Sobic001G137400 Sobic009G243000 Sobic009G243000 Sobic004G220200--Sobic009G243000 Sobic004G220200--Sobic004G234600 Sobic004G220200--Sobic001G086400 Sobic004G220200--Sobic010G194600 Sobic006G163300 Sobic006G163300 Sobic004G220200--Sobic006G163300 Sobic002G053350 Sobic002G053350 Sobic004G220200--Sobic002G053350 Sobic001G137600 Sobic001G137600 Sobic004G220200--Sobic001G137600 Sobic004G229200 Sobic004G229200 Sobic001G116600--Sobic004G229200 Sobic001G116600--Sobic002G345800 Sobic002G284100 Sobic002G284100 Sobic001G116600--Sobic002G284100 Sobic001G289900 Sobic001G289900 Sobic001G116600--Sobic001G289900 Sobic006G160200 Sobic006G160200 Sobic001G116600--Sobic006G160200 Sobic002G196500 Sobic002G196500 Sobic001G116600--Sobic002G196500 Sobic006G202100 Sobic006G202100 Sobic001G116600--Sobic006G202100 Sobic004G267600 Sobic004G267600 Sobic001G116600--Sobic004G267600 Sobic001G440900 Sobic001G440900 Sobic001G116600--Sobic001G440900 Sobic005G166100--Sobic001G216400 Sobic004G056000 Sobic004G056000 Sobic005G166100--Sobic004G056000 Sobic009G063700 Sobic009G063700 Sobic005G166100--Sobic009G063700 Sobic005G166100--Sobic007G128200 Sobic005G166100--Sobic003G381100 Sobic009G075500 Sobic009G075500 Sobic005G166100--Sobic009G075500 Sobic001G419500 Sobic001G419500 Sobic005G166100--Sobic001G419500 Sobic005G166100--Sobic007G193300 Sobic005G166100--Sobic006G097300 Sobic001G463301--Sobic003G300000 Sobic001G463301--Sobic010G183800 Sobic001G463301--Sobic003G092300 Sobic001G463301--Sobic009G063700 Sobic001G463301--Sobic001G459400 Sobic001G463301--Sobic001G158100 Sobic001G463301--Sobic009G075500 Sobic002G078900 Sobic002G078900 Sobic001G463301--Sobic002G078900 Sobic001G463301--Sobic004G234600 Sobic002G263000 Sobic002G263000 Sobic001G086400--Sobic002G263000 Sobic001G086400--Sobic003G207000 Sobic001G137800 Sobic001G137800 Sobic001G086400--Sobic001G137800 Sobic001G086400--Sobic010G194600 Sobic001G086400--Sobic001G137400 Sobic001G086400--Sobic002G121900 Sobic001G086400--Sobic002G053350 Sobic001G086400--Sobic007G128200 Sobic001G086400--Sobic001G171200
Octagon: transcription factors


© 2015- RIKEN, All rights reserved.