Gene annotation
Transcriptome id Sobic.001G116600.1
Synonym RKL1, Sb01g010290
Functional annotation inactive receptor kinase At2g26730 precursor, putative, expressed
UniProt C5WN28
Pfam PF08263 PF00069
Panther DB PTHR27008 PTHR27008:SF19
NCBI CDD KOG1187; Serine/threonine protein kinase
KEGG Orthology -
Gene Ontology GO:0006468; protein phosphorylation GO:0005524ATP binding GO:0004672protein kinase activity


Orthologs (automatic annotation)
TAIR AT1G48480 : receptor-like kinase 1
RAP-DB (Rice) LOC_Os03g50450.1 : inactive receptor kinase At2g26730 precursor, putative, expressed
MaizeGDB (Corn) Zm00025a028679 , Zm00025a007864 , Zm00025a016981 , Zm00025a044784
Brachypodium KQJ81841 , KQJ81840 , KQK22829 , KQK13625 , PNT60695 , PNT60696
Barley HORVU3Hr1G035530.1 , HORVU3Hr1G053300.2 , HORVU3Hr1G053300.3 , HORVU3Hr1G053300.1 , HORVU4Hr1G066900.2 , HORVU4Hr1G066900.1 , HORVU0Hr1G011420.1 , HORVU4Hr1G007550.1
Wheat TraesCS4A02G267300 , TraesCS4B02G047100 , TraesCS4D02G241100 , TraesCS3D02G234500 , TraesCS4B02G241500 , TraesCS4D02G046900 , TraesCS3B02G248200 , TraesCS4A02G064200
Populus -


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cDNA sequences
Sobic.001G116600


Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.004G229200 phosphate-induced protein 1 conserved region domain containing protein, expressed -
2 Sobic.002G345800 plastocyanin-like domain containing protein, putative, expressed -
3 Sobic.002G284100 ATROPGEF7/ROPGEF7, putative, expressed -
4 Sobic.001G289900 AT hook motif domain containing protein, expressed -
5 Sobic.006G160200 MSP domain containing protein, expressed -
6 Sobic.002G196500 linker histone H1 and H5 family protein, expressed -
7 Sobic.006G202100 WD repeat-containing protein, putative, expressed -
8 Sobic.004G267600 OsFBT4 - F-box and tubby domain containing protein, expressed -
9 Sobic.001G440900 LSM domain containing protein, expressed K11088: SNRPD3, small nuclear ribonucleoprotein D3
10 Sobic.001G369800 monocopper oxidase, putative, expressed -
11 Sobic.003G406600 Highest expression level in primordial inflorescence(PubMedID : 27501690)@"GW8/OsPL16(Ortholog in rice:Wang et al., 2012)"(PubMedID : 31659873)@OsSPL2 - SBP-box gene family member, expressed -
12 Sobic.005G062600 MLO domain containing protein, putative, expressed K08472: mlo protein
13 Sobic.001G382400 TKL_IRAK_CrRLK1L-1.5 - The CrRLK1L-1 subfamily has homology to the CrRLK1L homolog, expressed -
14 Sobic.004G220200 expressed protein -
15 Sobic.002G289800 HMG1/2, putative, expressed -
16 Sobic.001G101900 SCP-like extracellular protein, expressed -
17 Sobic.010G092400 glycosyl transferase 8 domain containing protein, putative, expressed -
18 Sobic.006G202150 - K03363: cell division cycle 20, cofactor of APC complex
19 Sobic.009G006900 ZOS5-01 - C2H2 zinc finger protein, expressed -
20 Sobic.001G300400 expansin precursor, putative, expressed -


Gene co-expression network
sample Sobic001G116600 Sobic001G116600 Sobic004G229200 Sobic004G229200 Sobic001G116600--Sobic004G229200 Sobic002G345800 Sobic002G345800 Sobic001G116600--Sobic002G345800 Sobic002G284100 Sobic002G284100 Sobic001G116600--Sobic002G284100 Sobic001G289900 Sobic001G289900 Sobic001G116600--Sobic001G289900 Sobic006G160200 Sobic006G160200 Sobic001G116600--Sobic006G160200 Sobic002G196500 Sobic002G196500 Sobic001G116600--Sobic002G196500 Sobic006G202100 Sobic006G202100 Sobic001G116600--Sobic006G202100 Sobic004G267600 Sobic004G267600 Sobic001G116600--Sobic004G267600 Sobic001G440900 Sobic001G440900 Sobic001G116600--Sobic001G440900 Sobic006G081800 Sobic006G081800 Sobic004G229200--Sobic006G081800 Sobic010G246400 Sobic010G246400 Sobic004G229200--Sobic010G246400 Sobic010G269700 Sobic010G269700 Sobic004G229200--Sobic010G269700 Sobic002G289800 Sobic002G289800 Sobic004G229200--Sobic002G289800 Sobic003G316601 Sobic003G316601 Sobic004G229200--Sobic003G316601 Sobic004G229200--Sobic001G116600 Sobic010G230000 Sobic010G230000 Sobic004G229200--Sobic010G230000 Sobic002G128000 Sobic002G128000 Sobic004G229200--Sobic002G128000 Sobic004G075900 Sobic004G075900 Sobic004G229200--Sobic004G075900 Sobic004G035800 Sobic004G035800 Sobic002G345800--Sobic004G035800 Sobic003G191600 Sobic003G191600 Sobic002G345800--Sobic003G191600 Sobic001G171200 Sobic001G171200 Sobic002G345800--Sobic001G171200 Sobic006G097300 Sobic006G097300 Sobic002G345800--Sobic006G097300 Sobic004G220200 Sobic004G220200 Sobic002G345800--Sobic004G220200 Sobic002G345800--Sobic001G116600 Sobic005G166100 Sobic005G166100 Sobic002G345800--Sobic005G166100 Sobic001G463301 Sobic001G463301 Sobic002G345800--Sobic001G463301 Sobic001G086400 Sobic001G086400 Sobic002G345800--Sobic001G086400 Sobic006G272800 Sobic006G272800 Sobic002G284100--Sobic006G272800 Sobic002G284100--Sobic004G267600 Sobic002G027600 Sobic002G027600 Sobic002G284100--Sobic002G027600 Sobic001G369800 Sobic001G369800 Sobic002G284100--Sobic001G369800 Sobic001G123100 Sobic001G123100 Sobic002G284100--Sobic001G123100 Sobic001G540700 Sobic001G540700 Sobic002G284100--Sobic001G540700 Sobic010G086000 Sobic010G086000 Sobic002G284100--Sobic010G086000 Sobic009G172950 Sobic009G172950 Sobic002G284100--Sobic009G172950 Sobic006G142500 Sobic006G142500 Sobic002G284100--Sobic006G142500 Sobic010G105400 Sobic010G105400 Sobic001G289900--Sobic010G105400 Sobic001G289900--Sobic002G289800 Sobic007G132900 Sobic007G132900 Sobic001G289900--Sobic007G132900 Sobic003G387700 Sobic003G387700 Sobic001G289900--Sobic003G387700 Sobic004G047100 Sobic004G047100 Sobic001G289900--Sobic004G047100 Sobic001G398400 Sobic001G398400 Sobic001G289900--Sobic001G398400 Sobic004G273000 Sobic004G273000 Sobic001G289900--Sobic004G273000 Sobic001G091500 Sobic001G091500 Sobic001G289900--Sobic001G091500 Sobic002G426800 Sobic002G426800 Sobic001G289900--Sobic002G426800 Sobic006G183600 Sobic006G183600 Sobic006G160200--Sobic006G183600 Sobic006G160200--Sobic002G284100 Sobic006G160200--Sobic004G267600 Sobic005G062600 Sobic005G062600 Sobic006G160200--Sobic005G062600 Sobic001G487200 Sobic001G487200 Sobic006G160200--Sobic001G487200 Sobic006G160200--Sobic009G172950 Sobic006G160200--Sobic001G369800 Sobic006G160200--Sobic001G540700 Sobic006G160200--Sobic006G272800 Sobic003G250100 Sobic003G250100 Sobic002G196500--Sobic003G250100 Sobic001G468000 Sobic001G468000 Sobic002G196500--Sobic001G468000 Sobic002G196500--Sobic006G272800 Sobic002G112000 Sobic002G112000 Sobic002G196500--Sobic002G112000 Sobic002G335500 Sobic002G335500 Sobic002G196500--Sobic002G335500 Sobic004G234600 Sobic004G234600 Sobic002G196500--Sobic004G234600 Sobic007G201900 Sobic007G201900 Sobic002G196500--Sobic007G201900 Sobic001G171100 Sobic001G171100 Sobic002G196500--Sobic001G171100 Sobic003G091200 Sobic003G091200 Sobic002G196500--Sobic003G091200 Sobic006G202150 Sobic006G202150 Sobic006G202100--Sobic006G202150 Sobic006G202100--Sobic001G116600 Sobic004G352100 Sobic004G352100 Sobic006G202100--Sobic004G352100 Sobic006G202100--Sobic004G220200 Sobic009G006900 Sobic009G006900 Sobic006G202100--Sobic009G006900 Sobic008G151600 Sobic008G151600 Sobic006G202100--Sobic008G151600 Sobic003G131100 Sobic003G131100 Sobic006G202100--Sobic003G131100 Sobic006G202100--Sobic002G196500 Sobic006G221800 Sobic006G221800 Sobic006G202100--Sobic006G221800 Sobic001G493900 Sobic001G493900 Sobic004G267600--Sobic001G493900 Sobic004G267600--Sobic002G284100 Sobic010G129700 Sobic010G129700 Sobic004G267600--Sobic010G129700 Sobic004G267600--Sobic006G142500 Sobic004G267600--Sobic002G027600 Sobic004G267600--Sobic006G272800 Sobic002G417000 Sobic002G417000 Sobic004G267600--Sobic002G417000 Sobic005G032600 Sobic005G032600 Sobic004G267600--Sobic005G032600 Sobic004G267600--Sobic005G062600 Sobic002G351100 Sobic002G351100 Sobic001G440900--Sobic002G351100 Sobic001G300400 Sobic001G300400 Sobic001G440900--Sobic001G300400 Sobic010G001800 Sobic010G001800 Sobic001G440900--Sobic010G001800 Sobic001G440900--Sobic001G289900 Sobic004G327600 Sobic004G327600 Sobic001G440900--Sobic004G327600 Sobic001G235700 Sobic001G235700 Sobic001G440900--Sobic001G235700 Sobic001G107300 Sobic001G107300 Sobic001G440900--Sobic001G107300 Sobic001G440900--Sobic002G289800 Sobic007G153700 Sobic007G153700 Sobic001G440900--Sobic007G153700
Octagon: transcription factors


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