Gene annotation
Transcriptome id Sobic.006G202100.1
Synonym CDC20.1
Functional annotation WD repeat-containing protein, putative, expressed
UniProt A0A1B6PMY8
Pfam -
Panther DB PTHR19918 PTHR19918:SF12
NCBI CDD -
KEGG Orthology -
Gene Ontology -


Orthologs (automatic annotation)
TAIR AT4G33270 : Transducin family protein / WD-40 repeat family protein
RAP-DB (Rice) LOC_Os04g51110.1 : WD repeat-containing protein, putative, expressed
MaizeGDB (Corn) Zm00025a021667 , Zm00025a032418
Brachypodium PNT63779 , PNT63778 , PNT63777 , PNT63776 , KQK00890 , PNT63780 , PNT63781 , KQJ88747
Barley -
Wheat TraesCS6A02G085400
Populus -


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Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.006G202150 - K03363: cell division cycle 20, cofactor of APC complex
2 Sobic.001G116600 inactive receptor kinase At2g26730 precursor, putative, expressed -
3 Sobic.004G352100 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@AT hook motif domain containing protein, expressed -
4 Sobic.004G220200 expressed protein -
5 Sobic.009G006900 ZOS5-01 - C2H2 zinc finger protein, expressed -
6 Sobic.008G151600 PMR5, putative, expressed -
7 Sobic.003G131100 Homologous to Dof genes in Arabidopsis and rice.(PubMedID : 21161392)@expressed protein -
8 Sobic.002G196500 linker histone H1 and H5 family protein, expressed -
9 Sobic.006G221800 OsFBX46 - F-box domain containing protein, expressed -
10 Sobic.007G070200 tentative name(PubMedID : 31536532)@OsFBX265 - F-box domain containing protein, expressed -
11 Sobic.010G026100 expressed protein -
12 Sobic.009G057800 kelch repeat-containing protein, putative, expressed -
13 Sobic.001G101700 OsGIF1(Ortholog in rice:He et al. (2017))(PubMedID : 31659832)@GRF-interacting factor 1, putative, expressed -
14 Sobic.009G087700 proline-rich family protein, putative, expressed -
15 Sobic.001G404700 protein kinase, putative, expressed -
16 Sobic.003G244000 SAG (Senescence-associated gene): up-regulated gene during salt-induced senescence.(PubMedID : 27586543)@aldose 1-epimerase, putative, expressed K01792: glucose-6-phosphate 1-epimerase
17 Sobic.003G390700 glycosyltransferase, putative, expressed -
18 Sobic.002G255600 glucan endo-1,3-beta-glucosidase precursor, putative, expressed -
19 Sobic.007G201900 expressed protein -
20 Sobic.008G057700 no apical meristem protein, putative, expressed -


Gene co-expression network
sample Sobic006G202100 Sobic006G202100 Sobic006G202150 Sobic006G202150 Sobic006G202100--Sobic006G202150 Sobic001G116600 Sobic001G116600 Sobic006G202100--Sobic001G116600 Sobic004G352100 Sobic004G352100 Sobic006G202100--Sobic004G352100 Sobic004G220200 Sobic004G220200 Sobic006G202100--Sobic004G220200 Sobic009G006900 Sobic009G006900 Sobic006G202100--Sobic009G006900 Sobic008G151600 Sobic008G151600 Sobic006G202100--Sobic008G151600 Sobic003G131100 Sobic003G131100 Sobic006G202100--Sobic003G131100 Sobic002G196500 Sobic002G196500 Sobic006G202100--Sobic002G196500 Sobic006G221800 Sobic006G221800 Sobic006G202100--Sobic006G221800 Sobic006G202150--Sobic006G202100 Sobic006G202150--Sobic001G116600 Sobic006G202150--Sobic004G220200 Sobic003G244000 Sobic003G244000 Sobic006G202150--Sobic003G244000 Sobic004G229200 Sobic004G229200 Sobic006G202150--Sobic004G229200 Sobic003G129200 Sobic003G129200 Sobic006G202150--Sobic003G129200 Sobic009G057800 Sobic009G057800 Sobic006G202150--Sobic009G057800 Sobic001G238900 Sobic001G238900 Sobic006G202150--Sobic001G238900 Sobic002G317700 Sobic002G317700 Sobic006G202150--Sobic002G317700 Sobic001G116600--Sobic004G229200 Sobic002G345800 Sobic002G345800 Sobic001G116600--Sobic002G345800 Sobic002G284100 Sobic002G284100 Sobic001G116600--Sobic002G284100 Sobic001G289900 Sobic001G289900 Sobic001G116600--Sobic001G289900 Sobic006G160200 Sobic006G160200 Sobic001G116600--Sobic006G160200 Sobic001G116600--Sobic002G196500 Sobic001G116600--Sobic006G202100 Sobic004G267600 Sobic004G267600 Sobic001G116600--Sobic004G267600 Sobic001G440900 Sobic001G440900 Sobic001G116600--Sobic001G440900 Sobic007G209600 Sobic007G209600 Sobic004G352100--Sobic007G209600 Sobic002G203500 Sobic002G203500 Sobic004G352100--Sobic002G203500 Sobic010G026100 Sobic010G026100 Sobic004G352100--Sobic010G026100 Sobic002G184400 Sobic002G184400 Sobic004G352100--Sobic002G184400 Sobic004G352100--Sobic008G151600 Sobic007G070200 Sobic007G070200 Sobic004G352100--Sobic007G070200 Sobic009G087700 Sobic009G087700 Sobic004G352100--Sobic009G087700 Sobic007G161600 Sobic007G161600 Sobic004G352100--Sobic007G161600 Sobic004G352100--Sobic006G202100 Sobic001G171200 Sobic001G171200 Sobic004G220200--Sobic001G171200 Sobic001G137400 Sobic001G137400 Sobic004G220200--Sobic001G137400 Sobic009G243000 Sobic009G243000 Sobic004G220200--Sobic009G243000 Sobic004G234600 Sobic004G234600 Sobic004G220200--Sobic004G234600 Sobic001G086400 Sobic001G086400 Sobic004G220200--Sobic001G086400 Sobic010G194600 Sobic010G194600 Sobic004G220200--Sobic010G194600 Sobic006G163300 Sobic006G163300 Sobic004G220200--Sobic006G163300 Sobic002G053350 Sobic002G053350 Sobic004G220200--Sobic002G053350 Sobic001G137600 Sobic001G137600 Sobic004G220200--Sobic001G137600 Sobic004G207000 Sobic004G207000 Sobic009G006900--Sobic004G207000 Sobic010G149600 Sobic010G149600 Sobic009G006900--Sobic010G149600 Sobic006G272800 Sobic006G272800 Sobic009G006900--Sobic006G272800 Sobic002G430900 Sobic002G430900 Sobic009G006900--Sobic002G430900 Sobic009G006900--Sobic002G196500 Sobic005G062600 Sobic005G062600 Sobic009G006900--Sobic005G062600 Sobic002G302600 Sobic002G302600 Sobic009G006900--Sobic002G302600 Sobic002G017900 Sobic002G017900 Sobic009G006900--Sobic002G017900 Sobic001G540700 Sobic001G540700 Sobic009G006900--Sobic001G540700 Sobic003G019900 Sobic003G019900 Sobic008G151600--Sobic003G019900 Sobic008G151600--Sobic006G221800 Sobic006G274200 Sobic006G274200 Sobic008G151600--Sobic006G274200 Sobic001G493900 Sobic001G493900 Sobic008G151600--Sobic001G493900 Sobic001G101700 Sobic001G101700 Sobic008G151600--Sobic001G101700 Sobic010G077000 Sobic010G077000 Sobic008G151600--Sobic010G077000 Sobic008G151600--Sobic007G161600 Sobic005G032600 Sobic005G032600 Sobic008G151600--Sobic005G032600 Sobic007G147200 Sobic007G147200 Sobic008G151600--Sobic007G147200 Sobic003G283600 Sobic003G283600 Sobic003G131100--Sobic003G283600 Sobic008G044600 Sobic008G044600 Sobic003G131100--Sobic008G044600 Sobic001G369800 Sobic001G369800 Sobic003G131100--Sobic001G369800 Sobic003G131100--Sobic010G149600 Sobic003G131100--Sobic005G032600 Sobic002G074000 Sobic002G074000 Sobic003G131100--Sobic002G074000 Sobic003G131100--Sobic004G207000 Sobic008G169400 Sobic008G169400 Sobic003G131100--Sobic008G169400 Sobic001G079900 Sobic001G079900 Sobic003G131100--Sobic001G079900 Sobic003G250100 Sobic003G250100 Sobic002G196500--Sobic003G250100 Sobic001G468000 Sobic001G468000 Sobic002G196500--Sobic001G468000 Sobic002G196500--Sobic006G272800 Sobic002G112000 Sobic002G112000 Sobic002G196500--Sobic002G112000 Sobic002G335500 Sobic002G335500 Sobic002G196500--Sobic002G335500 Sobic002G196500--Sobic004G234600 Sobic007G201900 Sobic007G201900 Sobic002G196500--Sobic007G201900 Sobic001G171100 Sobic001G171100 Sobic002G196500--Sobic001G171100 Sobic003G091200 Sobic003G091200 Sobic002G196500--Sobic003G091200 Sobic001G496400 Sobic001G496400 Sobic006G221800--Sobic001G496400 Sobic006G221800--Sobic001G101700 Sobic008G114900 Sobic008G114900 Sobic006G221800--Sobic008G114900 Sobic004G003700 Sobic004G003700 Sobic006G221800--Sobic004G003700 Sobic002G050700 Sobic002G050700 Sobic006G221800--Sobic002G050700 Sobic006G221800--Sobic008G151600 Sobic002G319300 Sobic002G319300 Sobic006G221800--Sobic002G319300 Sobic006G221800--Sobic009G087700 Sobic006G221800--Sobic001G493900
Octagon: transcription factors


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