Gene annotation
Transcriptome id Sobic.006G202150.1
Synonym -
Functional annotation -
UniProt A0A1Z5RFG6
Pfam PF00400
Panther DB PTHR19918 PTHR19918:SF12
NCBI CDD -
KEGG Orthology K03363; cell division cycle 20, cofactor of APC complex
Gene Ontology GO:0005515; protein binding


Orthologs (automatic annotation)
TAIR AT4G33270 : Transducin family protein / WD-40 repeat family protein
RAP-DB (Rice) LOC_Os02g47180.2 : WD repeat-containing protein, putative, expressed
MaizeGDB (Corn) -
Brachypodium KQJ84383
Barley -
Wheat TraesCS6B02G296200 , TraesCS6D02G246000 , TraesCS6A02G268900
Populus -


JBrowse

Open New Page


Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.006G202100 WD repeat-containing protein, putative, expressed -
2 Sobic.001G116600 inactive receptor kinase At2g26730 precursor, putative, expressed -
3 Sobic.004G220200 expressed protein -
4 Sobic.003G244000 SAG (Senescence-associated gene): up-regulated gene during salt-induced senescence.(PubMedID : 27586543)@aldose 1-epimerase, putative, expressed K01792: glucose-6-phosphate 1-epimerase
5 Sobic.004G229200 phosphate-induced protein 1 conserved region domain containing protein, expressed -
6 Sobic.003G129200 argonaute, putative, expressed -
7 Sobic.009G057800 kelch repeat-containing protein, putative, expressed -
8 Sobic.001G238900 OsFBX386 - F-box domain containing protein, expressed -
9 Sobic.002G317700 BNR/Asp-box repeat family protein, putative, expressed -
10 Sobic.007G201900 expressed protein -
11 Sobic.002G112000 protein binding protein, putative, expressed -
12 Sobic.008G057700 no apical meristem protein, putative, expressed -
13 Sobic.004G208100 expressed protein -
14 Sobic.002G196500 linker histone H1 and H5 family protein, expressed -
15 Sobic.002G300000 expansin precursor, putative, expressed -
16 Sobic.003G374100 beta-galactosidase precursor, putative, expressed -
17 Sobic.004G234600 expressed protein -
18 Sobic.001G171200 expressed protein -
19 Sobic.010G269700 expressed protein -
20 Sobic.009G006900 ZOS5-01 - C2H2 zinc finger protein, expressed -


Gene co-expression network
sample Sobic006G202150 Sobic006G202150 Sobic006G202100 Sobic006G202100 Sobic006G202150--Sobic006G202100 Sobic001G116600 Sobic001G116600 Sobic006G202150--Sobic001G116600 Sobic004G220200 Sobic004G220200 Sobic006G202150--Sobic004G220200 Sobic003G244000 Sobic003G244000 Sobic006G202150--Sobic003G244000 Sobic004G229200 Sobic004G229200 Sobic006G202150--Sobic004G229200 Sobic003G129200 Sobic003G129200 Sobic006G202150--Sobic003G129200 Sobic009G057800 Sobic009G057800 Sobic006G202150--Sobic009G057800 Sobic001G238900 Sobic001G238900 Sobic006G202150--Sobic001G238900 Sobic002G317700 Sobic002G317700 Sobic006G202150--Sobic002G317700 Sobic006G202100--Sobic006G202150 Sobic006G202100--Sobic001G116600 Sobic004G352100 Sobic004G352100 Sobic006G202100--Sobic004G352100 Sobic006G202100--Sobic004G220200 Sobic009G006900 Sobic009G006900 Sobic006G202100--Sobic009G006900 Sobic008G151600 Sobic008G151600 Sobic006G202100--Sobic008G151600 Sobic003G131100 Sobic003G131100 Sobic006G202100--Sobic003G131100 Sobic002G196500 Sobic002G196500 Sobic006G202100--Sobic002G196500 Sobic006G221800 Sobic006G221800 Sobic006G202100--Sobic006G221800 Sobic001G116600--Sobic004G229200 Sobic002G345800 Sobic002G345800 Sobic001G116600--Sobic002G345800 Sobic002G284100 Sobic002G284100 Sobic001G116600--Sobic002G284100 Sobic001G289900 Sobic001G289900 Sobic001G116600--Sobic001G289900 Sobic006G160200 Sobic006G160200 Sobic001G116600--Sobic006G160200 Sobic001G116600--Sobic002G196500 Sobic001G116600--Sobic006G202100 Sobic004G267600 Sobic004G267600 Sobic001G116600--Sobic004G267600 Sobic001G440900 Sobic001G440900 Sobic001G116600--Sobic001G440900 Sobic001G171200 Sobic001G171200 Sobic004G220200--Sobic001G171200 Sobic001G137400 Sobic001G137400 Sobic004G220200--Sobic001G137400 Sobic009G243000 Sobic009G243000 Sobic004G220200--Sobic009G243000 Sobic004G234600 Sobic004G234600 Sobic004G220200--Sobic004G234600 Sobic001G086400 Sobic001G086400 Sobic004G220200--Sobic001G086400 Sobic010G194600 Sobic010G194600 Sobic004G220200--Sobic010G194600 Sobic006G163300 Sobic006G163300 Sobic004G220200--Sobic006G163300 Sobic002G053350 Sobic002G053350 Sobic004G220200--Sobic002G053350 Sobic001G137600 Sobic001G137600 Sobic004G220200--Sobic001G137600 Sobic003G244000--Sobic001G238900 Sobic001G054700 Sobic001G054700 Sobic003G244000--Sobic001G054700 Sobic007G201900 Sobic007G201900 Sobic003G244000--Sobic007G201900 Sobic002G230800 Sobic002G230800 Sobic003G244000--Sobic002G230800 Sobic002G351100 Sobic002G351100 Sobic003G244000--Sobic002G351100 Sobic001G118800 Sobic001G118800 Sobic003G244000--Sobic001G118800 Sobic009G143200 Sobic009G143200 Sobic003G244000--Sobic009G143200 Sobic005G157300 Sobic005G157300 Sobic003G244000--Sobic005G157300 Sobic004G317000 Sobic004G317000 Sobic003G244000--Sobic004G317000 Sobic006G081800 Sobic006G081800 Sobic004G229200--Sobic006G081800 Sobic010G246400 Sobic010G246400 Sobic004G229200--Sobic010G246400 Sobic010G269700 Sobic010G269700 Sobic004G229200--Sobic010G269700 Sobic002G289800 Sobic002G289800 Sobic004G229200--Sobic002G289800 Sobic003G316601 Sobic003G316601 Sobic004G229200--Sobic003G316601 Sobic004G229200--Sobic001G116600 Sobic010G230000 Sobic010G230000 Sobic004G229200--Sobic010G230000 Sobic002G128000 Sobic002G128000 Sobic004G229200--Sobic002G128000 Sobic004G075900 Sobic004G075900 Sobic004G229200--Sobic004G075900 Sobic003G374100 Sobic003G374100 Sobic003G129200--Sobic003G374100 Sobic003G129200--Sobic004G234600 Sobic008G137700 Sobic008G137700 Sobic003G129200--Sobic008G137700 Sobic001G137800 Sobic001G137800 Sobic003G129200--Sobic001G137800 Sobic003G088600 Sobic003G088600 Sobic003G129200--Sobic003G088600 Sobic003G129200--Sobic002G053350 Sobic002G239101 Sobic002G239101 Sobic003G129200--Sobic002G239101 Sobic003G295100 Sobic003G295100 Sobic003G129200--Sobic003G295100 Sobic001G235200 Sobic001G235200 Sobic003G129200--Sobic001G235200 Sobic009G057800--Sobic007G201900 Sobic002G112000 Sobic002G112000 Sobic009G057800--Sobic002G112000 Sobic001G101700 Sobic001G101700 Sobic009G057800--Sobic001G101700 Sobic002G279400 Sobic002G279400 Sobic009G057800--Sobic002G279400 Sobic009G057800--Sobic008G151600 Sobic007G209200 Sobic007G209200 Sobic009G057800--Sobic007G209200 Sobic010G255000 Sobic010G255000 Sobic009G057800--Sobic010G255000 Sobic009G057800--Sobic009G143200 Sobic003G282500 Sobic003G282500 Sobic009G057800--Sobic003G282500 Sobic001G238900--Sobic003G244000 Sobic001G238900--Sobic002G230800 Sobic001G105800 Sobic001G105800 Sobic001G238900--Sobic001G105800 Sobic002G246900 Sobic002G246900 Sobic001G238900--Sobic002G246900 Sobic002G223900 Sobic002G223900 Sobic001G238900--Sobic002G223900 Sobic009G109300 Sobic009G109300 Sobic001G238900--Sobic009G109300 Sobic001G238900--Sobic004G317000 Sobic001G238900--Sobic001G118800 Sobic001G169800 Sobic001G169800 Sobic001G238900--Sobic001G169800 Sobic002G317700--Sobic002G112000 Sobic010G092400 Sobic010G092400 Sobic002G317700--Sobic010G092400 Sobic008G070700 Sobic008G070700 Sobic002G317700--Sobic008G070700 Sobic002G317700--Sobic004G267600 Sobic006G274200 Sobic006G274200 Sobic002G317700--Sobic006G274200 Sobic009G202801 Sobic009G202801 Sobic002G317700--Sobic009G202801 Sobic006G211900 Sobic006G211900 Sobic002G317700--Sobic006G211900 Sobic004G234500 Sobic004G234500 Sobic002G317700--Sobic004G234500 Sobic007G188001 Sobic007G188001 Sobic002G317700--Sobic007G188001
Octagon: transcription factors


© 2015- RIKEN, All rights reserved.