Gene annotation
Transcriptome id Sobic.002G300000.2,Sobic.002G300000.1
Synonym EXLA1, ATEXPL1, ATHEXPBETA2.1, Sb02g033070, EXPL1, ATEXLA1
Functional annotation expansin precursor, putative, expressed
UniProt C5X8H6 , A0A1W0W6B5
Pfam PF01357
Panther DB PTHR31692 PTHR31692:SF16
NCBI CDD -
KEGG Orthology -
Gene Ontology -


Orthologs (automatic annotation)
TAIR AT3G45970 : expansin-like A1
RAP-DB (Rice) LOC_Os07g29290.1 : expansin precursor, putative, expressed
MaizeGDB (Corn) Zm00025a053367 , Zm00025a014615 , Zm00025a003203
Brachypodium -
Barley -
Wheat -
Populus -


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cDNA sequences
Sobic.002G300000


Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.002G351100 DNA repair protein Rad51, putative, expressed K04482: DNA repair protein RAD51
2 Sobic.002G092200 vesicle-associated membrane protein, putative, expressed K08511: vesicle-associated membrane protein 72
3 Sobic.001G238900 OsFBX386 - F-box domain containing protein, expressed -
4 Sobic.004G238700 CSLA6 - cellulose synthase-like family A@ mannan synthase, expressed K13680: beta-mannan synthase
5 Sobic.003G208800 aspartic proteinase, putative, expressed -
6 Sobic.003G279100 mitochondrial ATP synthase g subunit family protein, putative, expressed K02140: ATPeFG, ATP5L, F-type H+-transporting ATPase subunit g
7 Sobic.006G202150 - K03363: cell division cycle 20, cofactor of APC complex
8 Sobic.004G095700 cysteine synthase, putative, expressed K01738: cysteine synthase
9 Sobic.006G263400 uracil-DNA glycosylase, putative, expressed K03648: UNG, uracil-DNA glycosylase
10 Sobic.009G109300 POLA4 - Putative DNA polymerase alpha complex subunit, expressed K02684: DNA primase small subunit
11 Sobic.004G208100 expressed protein -
12 Sobic.003G244000 SAG (Senescence-associated gene): up-regulated gene during salt-induced senescence.(PubMedID : 27586543)@aldose 1-epimerase, putative, expressed K01792: glucose-6-phosphate 1-epimerase
13 Sobic.001G439400 glycosyl hydrolase family 10 protein, putative, expressed -
14 Sobic.001G123300 Os3bglu7 - beta-glucosidase, exo-beta-glucanse, expressed K05350: beta-glucosidase
15 Sobic.002G315400 expressed protein -
16 Sobic.005G129700 SAG (Senescence-associated gene): up-regulated gene during salt-induced senescence.(PubMedID : 27586543)@sex determination protein tasselseed-2, putative, expressed -
17 Sobic.001G522500 bZIP family transcription factor, putative, expressed -
18 Sobic.006G083000 CAMK_CAMK_like.25 - CAMK includes calcium/calmodulin depedent protein kinases, expressed K14498: serine/threonine-protein kinase SRK2
19 Sobic.001G118800 homologous-pairing protein meu13, putative, expressed K06695: 26S proteasome regulatory subunit, ATPase 3, interacting protein
20 Sobic.002G246900 expressed protein -


Gene co-expression network
sample Sobic002G300000 Sobic002G300000 Sobic002G351100 Sobic002G351100 Sobic002G300000--Sobic002G351100 Sobic002G092200 Sobic002G092200 Sobic002G300000--Sobic002G092200 Sobic001G238900 Sobic001G238900 Sobic002G300000--Sobic001G238900 Sobic004G238700 Sobic004G238700 Sobic002G300000--Sobic004G238700 Sobic003G208800 Sobic003G208800 Sobic002G300000--Sobic003G208800 Sobic003G279100 Sobic003G279100 Sobic002G300000--Sobic003G279100 Sobic006G202150 Sobic006G202150 Sobic002G300000--Sobic006G202150 Sobic004G095700 Sobic004G095700 Sobic002G300000--Sobic004G095700 Sobic006G263400 Sobic006G263400 Sobic002G300000--Sobic006G263400 Sobic001G300400 Sobic001G300400 Sobic002G351100--Sobic001G300400 Sobic003G297200 Sobic003G297200 Sobic002G351100--Sobic003G297200 Sobic001G521100 Sobic001G521100 Sobic002G351100--Sobic001G521100 Sobic003G244000 Sobic003G244000 Sobic002G351100--Sobic003G244000 Sobic002G315400 Sobic002G315400 Sobic002G351100--Sobic002G315400 Sobic009G194900 Sobic009G194900 Sobic002G351100--Sobic009G194900 Sobic001G440900 Sobic001G440900 Sobic002G351100--Sobic001G440900 Sobic002G246900 Sobic002G246900 Sobic002G351100--Sobic002G246900 Sobic002G351100--Sobic001G238900 Sobic002G092200--Sobic002G315400 Sobic010G265900 Sobic010G265900 Sobic002G092200--Sobic010G265900 Sobic003G412800 Sobic003G412800 Sobic002G092200--Sobic003G412800 Sobic003G249900 Sobic003G249900 Sobic002G092200--Sobic003G249900 Sobic002G092200--Sobic004G095700 Sobic002G092200--Sobic002G300000 Sobic006G200000 Sobic006G200000 Sobic002G092200--Sobic006G200000 Sobic002G092200--Sobic002G351100 Sobic005G080900 Sobic005G080900 Sobic002G092200--Sobic005G080900 Sobic001G238900--Sobic003G244000 Sobic002G230800 Sobic002G230800 Sobic001G238900--Sobic002G230800 Sobic001G105800 Sobic001G105800 Sobic001G238900--Sobic001G105800 Sobic001G238900--Sobic002G246900 Sobic002G223900 Sobic002G223900 Sobic001G238900--Sobic002G223900 Sobic009G109300 Sobic009G109300 Sobic001G238900--Sobic009G109300 Sobic004G317000 Sobic004G317000 Sobic001G238900--Sobic004G317000 Sobic001G118800 Sobic001G118800 Sobic001G238900--Sobic001G118800 Sobic001G169800 Sobic001G169800 Sobic001G238900--Sobic001G169800 Sobic010G230000 Sobic010G230000 Sobic004G238700--Sobic010G230000 Sobic001G439400 Sobic001G439400 Sobic004G238700--Sobic001G439400 Sobic007G176800 Sobic007G176800 Sobic004G238700--Sobic007G176800 Sobic001G142000 Sobic001G142000 Sobic004G238700--Sobic001G142000 Sobic001G456500 Sobic001G456500 Sobic004G238700--Sobic001G456500 Sobic006G116500 Sobic006G116500 Sobic004G238700--Sobic006G116500 Sobic010G204700 Sobic010G204700 Sobic004G238700--Sobic010G204700 Sobic002G258300 Sobic002G258300 Sobic004G238700--Sobic002G258300 Sobic009G227600 Sobic009G227600 Sobic004G238700--Sobic009G227600 Sobic003G208800--Sobic006G263400 Sobic001G123300 Sobic001G123300 Sobic003G208800--Sobic001G123300 Sobic001G081800 Sobic001G081800 Sobic003G208800--Sobic001G081800 Sobic003G208800--Sobic002G351100 Sobic010G212700 Sobic010G212700 Sobic003G208800--Sobic010G212700 Sobic001G171100 Sobic001G171100 Sobic003G208800--Sobic001G171100 Sobic001G081100 Sobic001G081100 Sobic003G208800--Sobic001G081100 Sobic002G343000 Sobic002G343000 Sobic003G208800--Sobic002G343000 Sobic002G109100 Sobic002G109100 Sobic003G208800--Sobic002G109100 Sobic004G217450 Sobic004G217450 Sobic003G279100--Sobic004G217450 Sobic006G149200 Sobic006G149200 Sobic003G279100--Sobic006G149200 Sobic004G285900 Sobic004G285900 Sobic003G279100--Sobic004G285900 Sobic003G279100--Sobic001G300400 Sobic010G222100 Sobic010G222100 Sobic003G279100--Sobic010G222100 Sobic006G081800 Sobic006G081800 Sobic003G279100--Sobic006G081800 Sobic010G215800 Sobic010G215800 Sobic003G279100--Sobic010G215800 Sobic001G505000 Sobic001G505000 Sobic003G279100--Sobic001G505000 Sobic001G261549 Sobic001G261549 Sobic003G279100--Sobic001G261549 Sobic006G202100 Sobic006G202100 Sobic006G202150--Sobic006G202100 Sobic001G116600 Sobic001G116600 Sobic006G202150--Sobic001G116600 Sobic004G220200 Sobic004G220200 Sobic006G202150--Sobic004G220200 Sobic006G202150--Sobic003G244000 Sobic004G229200 Sobic004G229200 Sobic006G202150--Sobic004G229200 Sobic003G129200 Sobic003G129200 Sobic006G202150--Sobic003G129200 Sobic009G057800 Sobic009G057800 Sobic006G202150--Sobic009G057800 Sobic006G202150--Sobic001G238900 Sobic002G317700 Sobic002G317700 Sobic006G202150--Sobic002G317700 Sobic002G236700 Sobic002G236700 Sobic004G095700--Sobic002G236700 Sobic006G120700 Sobic006G120700 Sobic004G095700--Sobic006G120700 Sobic004G095700--Sobic002G092200 Sobic004G095700--Sobic009G109300 Sobic004G095700--Sobic002G315400 Sobic004G095700--Sobic001G521100 Sobic009G189200 Sobic009G189200 Sobic004G095700--Sobic009G189200 Sobic004G095700--Sobic002G300000 Sobic003G072900 Sobic003G072900 Sobic004G095700--Sobic003G072900 Sobic006G263400--Sobic003G208800 Sobic006G263400--Sobic002G109100 Sobic006G263400--Sobic001G123300 Sobic001G120400 Sobic001G120400 Sobic006G263400--Sobic001G120400 Sobic006G263400--Sobic002G343000 Sobic006G263400--Sobic002G315400 Sobic006G263400--Sobic002G351100 Sobic010G177100 Sobic010G177100 Sobic006G263400--Sobic010G177100 Sobic009G148000 Sobic009G148000 Sobic006G263400--Sobic009G148000
Octagon: transcription factors


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