Gene annotation
Transcriptome id Sobic.001G522500.1
Synonym Sb01g048710
Functional annotation bZIP family transcription factor, putative, expressed
UniProt A0A1B6QQT3
Pfam PF00170
Panther DB PTHR13690 PTHR13690:SF76
NCBI CDD -
KEGG Orthology -
Gene Ontology GO:0006355; regulation of transcription, DNA-templated GO:0003700DNA-binding transcription factor activity


Orthologs (automatic annotation)
TAIR AT4G38900 : Basic-leucine zipper (bZIP) transcription factor family protein
RAP-DB (Rice) LOC_Os03g03550.1 : bZIP family transcription factor, putative, expressed
MaizeGDB (Corn) Zm00025a053476 , Zm00025a003114 , Zm00025a000364
Brachypodium KQK23875 , KQJ97563
Barley HORVU1Hr1G049310.8 , HORVU1Hr1G049310.9 , HORVU1Hr1G049310.4 , HORVU1Hr1G049310.5 , HORVU1Hr1G049310.6 , HORVU1Hr1G049310.7 , HORVU1Hr1G049310.1 , HORVU1Hr1G049310.2 , HORVU1Hr1G049310.3 , HORVU1Hr1G049310.10 , HORVU1Hr1G049310.11 , HORVU4Hr1G083000.3 , HORVU4Hr1G083000.2 , HORVU4Hr1G083000.1 , HORVU4Hr1G083000.6 , HORVU4Hr1G083000.5 , HORVU4Hr1G083000.4 , HORVU3Hr1G109890.1 , HORVU4Hr1G053410.5 , HORVU4Hr1G053410.4 , HORVU4Hr1G053410.1 , HORVU4Hr1G053410.3 , HORVU4Hr1G053410.2
Wheat TraesCS1D02G191000 , TraesCS4B02G320400 , TraesCS1B02G193800 , TraesCS4D02G316900 , TraesCS4D02G316900 , TraesCS1A02G186000 , TraesCS5A02G491600
Populus -


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Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.001G152901 "YABBY transcription factor, "(PubMedID : 22581231) -
2 Sobic.003G027200 plastocyanin-like domain containing protein, putative, expressed -
3 Sobic.007G217800 expressed protein -
4 Sobic.002G239000 plastocyanin-like domain containing protein, putative, expressed -
5 Sobic.002G237000 fasciclin domain containing protein, expressed -
6 Sobic.001G287900 ubiquitin carboxyl-terminal hydrolase domain containing protein, expressed K11855: ubiquitin carboxyl-terminal hydrolase 36/42
7 Sobic.007G043000 transcription factor X1, putative, expressed -
8 Sobic.001G137800 ankyrin, putative, expressed -
9 Sobic.003G381100 OsMADS21 - MADS-box family gene with MIKCc type-box, expressed -
10 Sobic.006G228000 glycine-rich protein 2, putative -
11 Sobic.010G212700 tetraspanin family protein, putative, expressed -
12 Sobic.003G317700 cyclic nucleotide-gated ion channel 2, putative, expressed -
13 Sobic.008G072900 OsMADS13 - MADS-box family gene with MIKCc type-box, expressed -
14 Sobic.010G230000 monocopper oxidase, putative, expressed -
15 Sobic.003G374100 beta-galactosidase precursor, putative, expressed -
16 Sobic.001G216400 nodulin, putative, expressed K07192: flotillin
17 Sobic.002G089600 SAG (Senescence-associated gene): up-regulated gene during dark-induced senescence.(PubMedID : 27586543)@DEF8 - Defensin and Defensin-like DEFL family, expressed -
18 Sobic.005G221300 - -
19 Sobic.010G204700 LTPL129 - Protease inhibitor/seed storage/LTP family protein precursor, expressed -
20 Sobic.007G205300 AP2 domain containing protein, expressed -


Gene co-expression network
sample Sobic001G522500 Sobic001G522500 Sobic001G152901 Sobic001G152901 Sobic001G522500--Sobic001G152901 Sobic003G027200 Sobic003G027200 Sobic001G522500--Sobic003G027200 Sobic007G217800 Sobic007G217800 Sobic001G522500--Sobic007G217800 Sobic002G239000 Sobic002G239000 Sobic001G522500--Sobic002G239000 Sobic002G237000 Sobic002G237000 Sobic001G522500--Sobic002G237000 Sobic001G287900 Sobic001G287900 Sobic001G522500--Sobic001G287900 Sobic007G043000 Sobic007G043000 Sobic001G522500--Sobic007G043000 Sobic001G137800 Sobic001G137800 Sobic001G522500--Sobic001G137800 Sobic003G381100 Sobic003G381100 Sobic001G522500--Sobic003G381100 Sobic001G152901--Sobic007G217800 Sobic002G076600 Sobic002G076600 Sobic001G152901--Sobic002G076600 Sobic004G014700 Sobic004G014700 Sobic001G152901--Sobic004G014700 Sobic008G138200 Sobic008G138200 Sobic001G152901--Sobic008G138200 Sobic006G163200 Sobic006G163200 Sobic001G152901--Sobic006G163200 Sobic001G152901--Sobic001G287900 Sobic006G131100 Sobic006G131100 Sobic001G152901--Sobic006G131100 Sobic006G189500 Sobic006G189500 Sobic001G152901--Sobic006G189500 Sobic005G070800 Sobic005G070800 Sobic001G152901--Sobic005G070800 Sobic008G072900 Sobic008G072900 Sobic003G027200--Sobic008G072900 Sobic003G027200--Sobic003G381100 Sobic001G377600 Sobic001G377600 Sobic003G027200--Sobic001G377600 Sobic003G029900 Sobic003G029900 Sobic003G027200--Sobic003G029900 Sobic010G118900 Sobic010G118900 Sobic003G027200--Sobic010G118900 Sobic006G097300 Sobic006G097300 Sobic003G027200--Sobic006G097300 Sobic003G027200--Sobic001G287900 Sobic007G193300 Sobic007G193300 Sobic003G027200--Sobic007G193300 Sobic003G027200--Sobic002G239000 Sobic007G217800--Sobic001G152901 Sobic007G217800--Sobic001G287900 Sobic007G217800--Sobic004G014700 Sobic007G217800--Sobic006G189500 Sobic007G217800--Sobic002G076600 Sobic004G195400 Sobic004G195400 Sobic007G217800--Sobic004G195400 Sobic007G217800--Sobic008G138200 Sobic007G217800--Sobic006G163200 Sobic003G063700 Sobic003G063700 Sobic007G217800--Sobic003G063700 Sobic002G239000--Sobic003G381100 Sobic004G254100 Sobic004G254100 Sobic002G239000--Sobic004G254100 Sobic002G239000--Sobic007G043000 Sobic002G239000--Sobic003G063700 Sobic002G239000--Sobic008G072900 Sobic002G239000--Sobic003G027200 Sobic001G216400 Sobic001G216400 Sobic002G239000--Sobic001G216400 Sobic009G211300 Sobic009G211300 Sobic002G239000--Sobic009G211300 Sobic004G056000 Sobic004G056000 Sobic002G239000--Sobic004G056000 Sobic006G228000 Sobic006G228000 Sobic002G237000--Sobic006G228000 Sobic002G237000--Sobic001G137800 Sobic002G237000--Sobic001G216400 Sobic009G075500 Sobic009G075500 Sobic002G237000--Sobic009G075500 Sobic002G237000--Sobic007G043000 Sobic001G235200 Sobic001G235200 Sobic002G237000--Sobic001G235200 Sobic003G204200 Sobic003G204200 Sobic002G237000--Sobic003G204200 Sobic004G234600 Sobic004G234600 Sobic002G237000--Sobic004G234600 Sobic003G092300 Sobic003G092300 Sobic002G237000--Sobic003G092300 Sobic001G287900--Sobic010G118900 Sobic001G287900--Sobic007G217800 Sobic002G121900 Sobic002G121900 Sobic001G287900--Sobic002G121900 Sobic001G287900--Sobic008G138200 Sobic008G031000 Sobic008G031000 Sobic001G287900--Sobic008G031000 Sobic003G274000 Sobic003G274000 Sobic001G287900--Sobic003G274000 Sobic001G287900--Sobic001G152901 Sobic003G044800 Sobic003G044800 Sobic001G287900--Sobic003G044800 Sobic001G287900--Sobic007G043000 Sobic001G235100 Sobic001G235100 Sobic007G043000--Sobic001G235100 Sobic007G043000--Sobic002G121900 Sobic007G043000--Sobic004G254100 Sobic007G043000--Sobic008G138200 Sobic007G043000--Sobic001G137800 Sobic007G043000--Sobic001G216400 Sobic007G043000--Sobic003G381100 Sobic007G128200 Sobic007G128200 Sobic007G043000--Sobic007G128200 Sobic007G043000--Sobic003G063700 Sobic001G137800--Sobic006G228000 Sobic001G137800--Sobic001G235200 Sobic003G374100 Sobic003G374100 Sobic001G137800--Sobic003G374100 Sobic001G137800--Sobic007G043000 Sobic001G137800--Sobic002G121900 Sobic001G137800--Sobic001G235100 Sobic006G213900 Sobic006G213900 Sobic001G137800--Sobic006G213900 Sobic001G137800--Sobic001G216400 Sobic001G137800--Sobic007G128200 Sobic003G381100--Sobic004G056000 Sobic003G381100--Sobic001G216400 Sobic003G381100--Sobic008G072900 Sobic003G381100--Sobic003G027200 Sobic003G381100--Sobic006G097300 Sobic003G381100--Sobic004G254100 Sobic003G381100--Sobic007G043000 Sobic005G166100 Sobic005G166100 Sobic003G381100--Sobic005G166100 Sobic003G381100--Sobic007G193300
Octagon: transcription factors


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