Gene annotation
Transcriptome id Sobic.006G263400.1
Synonym UNG, ATUNG, Sb06g032610
Functional annotation uracil-DNA glycosylase, putative, expressed
UniProt A0A1B6PP12
Pfam PF03167
Panther DB PTHR11264 PTHR11264:SF9
NCBI CDD KOG2994; Uracil DNA glycosylase
KEGG Orthology K03648; UNG, uracil-DNA glycosylase
Gene Ontology GO:0006284; base-excision repair GO:0006281DNA repair GO:0004844uracil DNA N-glycosylase activity


Orthologs (automatic annotation)
TAIR AT3G18630 : uracil dna glycosylase
RAP-DB (Rice) LOC_Os04g57730.1 : uracil-DNA glycosylase, putative, expressed
MaizeGDB (Corn) Zm00025a009344
Brachypodium KQJ85252
Barley HORVU2Hr1G120470.13 , HORVU2Hr1G120470.11 , HORVU2Hr1G120470.1 , HORVU2Hr1G120470.2 , HORVU2Hr1G120470.3 , HORVU2Hr1G120470.5 , HORVU2Hr1G120470.6 , HORVU2Hr1G120470.7 , HORVU2Hr1G120470.8 , HORVU2Hr1G120470.9
Wheat TraesCS2D02G552400 , TraesCS2B02G582400 , TraesCS2A02G551200 , TraesCS2A02G551200
Populus -


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cDNA sequences
Sobic.006G263400


Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.003G208800 aspartic proteinase, putative, expressed -
2 Sobic.002G109100 LTPL42 - Protease inhibitor/seed storage/LTP family protein precursor, expressed -
3 Sobic.001G123300 Os3bglu7 - beta-glucosidase, exo-beta-glucanse, expressed K05350: beta-glucosidase
4 Sobic.001G120400 phospholipase A2, putative, expressed K01047: PLA2G, secretory phospholipase A2
5 Sobic.002G343000 expressed protein -
6 Sobic.002G315400 expressed protein -
7 Sobic.002G351100 DNA repair protein Rad51, putative, expressed K04482: DNA repair protein RAD51
8 Sobic.010G177100 expressed protein -
9 Sobic.009G148000 anthranilate phosphoribosyltransferase, putative, expressed -
10 Sobic.001G521100 POLD2 - Putative DNA polymerase delta complex subunit, expressed K02328: DNA polymerase delta subunit 2
11 Sobic.001G507000 expressed protein -
12 Sobic.001G085200 X8 domain containing protein, expressed -
13 Sobic.001G154400 expp1 protein precursor, putative, expressed -
14 Sobic.010G087100 MCM9 - Putative minichromosome maintenance MCM family subunit 9, expressed K10738: DNA helicase MCM9
15 Sobic.001G458400 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence./late senescence marker during developmental senescence(PubMedID : 27586543)@Os3bglu6 - beta-glucosidase/beta-fucosidase/beta-galactosidase, expressed K01188: beta-glucosidase
16 Sobic.003G217500 expressed protein -
17 Sobic.002G253900 growth regulator related protein, putative, expressed -
18 Sobic.001G081100 OsSub31 - Putative Subtilisin homologue, expressed -
19 Sobic.002G092200 vesicle-associated membrane protein, putative, expressed K08511: vesicle-associated membrane protein 72
20 Sobic.010G079100 lysM domain-containing GPI-anchored protein 1 precursor, putative, expressed -


Gene co-expression network
sample Sobic006G263400 Sobic006G263400 Sobic003G208800 Sobic003G208800 Sobic006G263400--Sobic003G208800 Sobic002G109100 Sobic002G109100 Sobic006G263400--Sobic002G109100 Sobic001G123300 Sobic001G123300 Sobic006G263400--Sobic001G123300 Sobic001G120400 Sobic001G120400 Sobic006G263400--Sobic001G120400 Sobic002G343000 Sobic002G343000 Sobic006G263400--Sobic002G343000 Sobic002G315400 Sobic002G315400 Sobic006G263400--Sobic002G315400 Sobic002G351100 Sobic002G351100 Sobic006G263400--Sobic002G351100 Sobic010G177100 Sobic010G177100 Sobic006G263400--Sobic010G177100 Sobic009G148000 Sobic009G148000 Sobic006G263400--Sobic009G148000 Sobic003G208800--Sobic006G263400 Sobic003G208800--Sobic001G123300 Sobic001G081800 Sobic001G081800 Sobic003G208800--Sobic001G081800 Sobic003G208800--Sobic002G351100 Sobic010G212700 Sobic010G212700 Sobic003G208800--Sobic010G212700 Sobic001G171100 Sobic001G171100 Sobic003G208800--Sobic001G171100 Sobic001G081100 Sobic001G081100 Sobic003G208800--Sobic001G081100 Sobic003G208800--Sobic002G343000 Sobic003G208800--Sobic002G109100 Sobic001G458400 Sobic001G458400 Sobic002G109100--Sobic001G458400 Sobic001G085200 Sobic001G085200 Sobic002G109100--Sobic001G085200 Sobic002G109100--Sobic006G263400 Sobic006G143300 Sobic006G143300 Sobic002G109100--Sobic006G143300 Sobic002G109100--Sobic001G123300 Sobic002G109100--Sobic003G208800 Sobic002G109100--Sobic002G343000 Sobic007G083000 Sobic007G083000 Sobic002G109100--Sobic007G083000 Sobic003G430100 Sobic003G430100 Sobic002G109100--Sobic003G430100 Sobic001G123300--Sobic003G208800 Sobic001G123100 Sobic001G123100 Sobic001G123300--Sobic001G123100 Sobic004G145300 Sobic004G145300 Sobic001G123300--Sobic004G145300 Sobic001G123300--Sobic001G081100 Sobic002G284100 Sobic002G284100 Sobic001G123300--Sobic002G284100 Sobic001G123300--Sobic001G171100 Sobic002G220700 Sobic002G220700 Sobic001G123300--Sobic002G220700 Sobic001G123300--Sobic010G212700 Sobic001G123300--Sobic006G263400 Sobic001G120400--Sobic006G263400 Sobic010G079100 Sobic010G079100 Sobic001G120400--Sobic010G079100 Sobic001G507000 Sobic001G507000 Sobic001G120400--Sobic001G507000 Sobic001G120400--Sobic010G177100 Sobic005G068800 Sobic005G068800 Sobic001G120400--Sobic005G068800 Sobic003G084200 Sobic003G084200 Sobic001G120400--Sobic003G084200 Sobic009G109300 Sobic009G109300 Sobic001G120400--Sobic009G109300 Sobic001G468500 Sobic001G468500 Sobic001G120400--Sobic001G468500 Sobic006G120600 Sobic006G120600 Sobic001G120400--Sobic006G120600 Sobic002G343000--Sobic009G148000 Sobic006G200901 Sobic006G200901 Sobic002G343000--Sobic006G200901 Sobic004G014100 Sobic004G014100 Sobic002G343000--Sobic004G014100 Sobic002G343000--Sobic006G143300 Sobic002G253900 Sobic002G253900 Sobic002G343000--Sobic002G253900 Sobic003G217500 Sobic003G217500 Sobic002G343000--Sobic003G217500 Sobic002G230400 Sobic002G230400 Sobic002G343000--Sobic002G230400 Sobic008G041900 Sobic008G041900 Sobic002G343000--Sobic008G041900 Sobic006G186300 Sobic006G186300 Sobic002G343000--Sobic006G186300 Sobic001G521100 Sobic001G521100 Sobic002G315400--Sobic001G521100 Sobic002G092200 Sobic002G092200 Sobic002G315400--Sobic002G092200 Sobic002G315400--Sobic002G351100 Sobic002G236700 Sobic002G236700 Sobic002G315400--Sobic002G236700 Sobic002G315400--Sobic009G109300 Sobic003G412800 Sobic003G412800 Sobic002G315400--Sobic003G412800 Sobic003G297200 Sobic003G297200 Sobic002G315400--Sobic003G297200 Sobic002G246900 Sobic002G246900 Sobic002G315400--Sobic002G246900 Sobic007G112100 Sobic007G112100 Sobic002G315400--Sobic007G112100 Sobic001G300400 Sobic001G300400 Sobic002G351100--Sobic001G300400 Sobic002G351100--Sobic003G297200 Sobic002G351100--Sobic001G521100 Sobic003G244000 Sobic003G244000 Sobic002G351100--Sobic003G244000 Sobic002G351100--Sobic002G315400 Sobic009G194900 Sobic009G194900 Sobic002G351100--Sobic009G194900 Sobic001G440900 Sobic001G440900 Sobic002G351100--Sobic001G440900 Sobic002G351100--Sobic002G246900 Sobic001G238900 Sobic001G238900 Sobic002G351100--Sobic001G238900 Sobic001G460100 Sobic001G460100 Sobic010G177100--Sobic001G460100 Sobic003G259300 Sobic003G259300 Sobic010G177100--Sobic003G259300 Sobic010G177100--Sobic010G079100 Sobic003G024000 Sobic003G024000 Sobic010G177100--Sobic003G024000 Sobic005G157300 Sobic005G157300 Sobic010G177100--Sobic005G157300 Sobic001G425700 Sobic001G425700 Sobic010G177100--Sobic001G425700 Sobic007G050800 Sobic007G050800 Sobic010G177100--Sobic007G050800 Sobic010G177100--Sobic003G412800 Sobic009G225500 Sobic009G225500 Sobic010G177100--Sobic009G225500 Sobic009G148000--Sobic002G343000 Sobic009G148000--Sobic002G253900 Sobic009G148000--Sobic006G200901 Sobic009G148000--Sobic006G186300 Sobic009G148000--Sobic003G217500 Sobic001G005800 Sobic001G005800 Sobic009G148000--Sobic001G005800 Sobic009G148000--Sobic004G014100 Sobic009G148000--Sobic008G041900 Sobic004G250600 Sobic004G250600 Sobic009G148000--Sobic004G250600
Octagon: transcription factors


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