Gene annotation
Transcriptome id Sobic.001G120400.1
Synonym PLA2-ALPHA, ATSPLA2-ALPHA, Sb01g010640
Functional annotation phospholipase A2, putative, expressed
UniProt C5WNR0
Pfam -
Panther DB PTHR11716 PTHR11716:SF54
NCBI CDD -
KEGG Orthology K01047; PLA2G, secretory phospholipase A2
Gene Ontology GO:0016042; lipid catabolic process GO:0005509calcium ion binding GO:0004623phospholipase A2 activity


Orthologs (automatic annotation)
TAIR AT2G06925 : Phospholipase A2 family protein
RAP-DB (Rice) LOC_Os03g50030.1 : phospholipase A2, putative, expressed
MaizeGDB (Corn) Zm00025a007788 , Zm00025a017020
Brachypodium KQK13580 , KQK13581
Barley HORVU4Hr1G006850.3 , HORVU4Hr1G006850.2 , HORVU4Hr1G006850.1 , HORVU4Hr1G006850.5 , HORVU4Hr1G006850.4
Wheat TraesCS4A02G270800 , TraesCS4B02G043300 , TraesCS4D02G040800
Populus -


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cDNA sequences
Sobic.001G120400


Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.006G263400 uracil-DNA glycosylase, putative, expressed K03648: UNG, uracil-DNA glycosylase
2 Sobic.010G079100 lysM domain-containing GPI-anchored protein 1 precursor, putative, expressed -
3 Sobic.001G507000 expressed protein -
4 Sobic.010G177100 expressed protein -
5 Sobic.005G068800 TOPBP1A - Similar to DNA replication protein TOPBP1 from, expressed K10728: topoisomerase (DNA) II binding protein 1
6 Sobic.003G084200 SAG (Senescence-associated gene): up-regulated gene during dark-induced senescence.(PubMedID : 27586543)@expressed protein -
7 Sobic.009G109300 POLA4 - Putative DNA polymerase alpha complex subunit, expressed K02684: DNA primase small subunit
8 Sobic.001G468500 ethylene-responsive element-binding protein, putative, expressed -
9 Sobic.006G120600 AAA-type ATPase family protein, putative, expressed -
10 Sobic.002G133000 delta14-sterol reductase, putative, expressed K00222: TM7SF2, Delta14-sterol reductase
11 Sobic.003G412800 Candidate orthologue to the genomic region of wheat Hessian fy resistance gene H32(PubMedID : 28624908)@expressed protein -
12 Sobic.010G103700 POLA2 - Putative DNA polymerase alpha complex subunit, expressed K02321: DNA polymerase alpha subunit B
13 Sobic.001G369800 monocopper oxidase, putative, expressed -
14 Sobic.004G330600 GHMP kinases ATP-binding protein, putative, expressed K01597: MVD, diphosphomevalonate decarboxylase
15 Sobic.003G183700 MCM4 - Putative minichromosome maintenance MCM complex subunit 4, expressed K02212: MCM4, DNA replication licensing factor MCM4
16 Sobic.006G281900 down-regulated TF in developmental senescence(PubMedID : 27586543)@no apical meristem protein, putative, expressed -
17 Sobic.004G036800 glucan endo-1,3-beta-glucosidase precursor, putative, expressed -
18 Sobic.010G021900 rad1, putative, expressed K02830: HRAD1, cell cycle checkpoint protein
19 Sobic.001G146900 expressed protein -
20 Sobic.002G238500 AGC_PVPK_like_kin82y.16 - ACG kinases include homologs to PKA, PKG and PKC, expressed -


Gene co-expression network
sample Sobic001G120400 Sobic001G120400 Sobic006G263400 Sobic006G263400 Sobic001G120400--Sobic006G263400 Sobic010G079100 Sobic010G079100 Sobic001G120400--Sobic010G079100 Sobic001G507000 Sobic001G507000 Sobic001G120400--Sobic001G507000 Sobic010G177100 Sobic010G177100 Sobic001G120400--Sobic010G177100 Sobic005G068800 Sobic005G068800 Sobic001G120400--Sobic005G068800 Sobic003G084200 Sobic003G084200 Sobic001G120400--Sobic003G084200 Sobic009G109300 Sobic009G109300 Sobic001G120400--Sobic009G109300 Sobic001G468500 Sobic001G468500 Sobic001G120400--Sobic001G468500 Sobic006G120600 Sobic006G120600 Sobic001G120400--Sobic006G120600 Sobic003G208800 Sobic003G208800 Sobic006G263400--Sobic003G208800 Sobic002G109100 Sobic002G109100 Sobic006G263400--Sobic002G109100 Sobic001G123300 Sobic001G123300 Sobic006G263400--Sobic001G123300 Sobic006G263400--Sobic001G120400 Sobic002G343000 Sobic002G343000 Sobic006G263400--Sobic002G343000 Sobic002G315400 Sobic002G315400 Sobic006G263400--Sobic002G315400 Sobic002G351100 Sobic002G351100 Sobic006G263400--Sobic002G351100 Sobic006G263400--Sobic010G177100 Sobic009G148000 Sobic009G148000 Sobic006G263400--Sobic009G148000 Sobic003G289800 Sobic003G289800 Sobic010G079100--Sobic003G289800 Sobic003G412800 Sobic003G412800 Sobic010G079100--Sobic003G412800 Sobic001G369800 Sobic001G369800 Sobic010G079100--Sobic001G369800 Sobic009G172950 Sobic009G172950 Sobic010G079100--Sobic009G172950 Sobic003G389100 Sobic003G389100 Sobic010G079100--Sobic003G389100 Sobic001G169800 Sobic001G169800 Sobic010G079100--Sobic001G169800 Sobic003G183700 Sobic003G183700 Sobic010G079100--Sobic003G183700 Sobic001G051300 Sobic001G051300 Sobic010G079100--Sobic001G051300 Sobic003G179500 Sobic003G179500 Sobic010G079100--Sobic003G179500 Sobic001G507000--Sobic005G068800 Sobic004G321400 Sobic004G321400 Sobic001G507000--Sobic004G321400 Sobic001G507000--Sobic003G183700 Sobic001G146900 Sobic001G146900 Sobic001G507000--Sobic001G146900 Sobic001G507000--Sobic006G120600 Sobic004G156200 Sobic004G156200 Sobic001G507000--Sobic004G156200 Sobic006G195500 Sobic006G195500 Sobic001G507000--Sobic006G195500 Sobic004G095200 Sobic004G095200 Sobic001G507000--Sobic004G095200 Sobic009G087000 Sobic009G087000 Sobic001G507000--Sobic009G087000 Sobic001G460100 Sobic001G460100 Sobic010G177100--Sobic001G460100 Sobic003G259300 Sobic003G259300 Sobic010G177100--Sobic003G259300 Sobic010G177100--Sobic010G079100 Sobic003G024000 Sobic003G024000 Sobic010G177100--Sobic003G024000 Sobic005G157300 Sobic005G157300 Sobic010G177100--Sobic005G157300 Sobic001G425700 Sobic001G425700 Sobic010G177100--Sobic001G425700 Sobic007G050800 Sobic007G050800 Sobic010G177100--Sobic007G050800 Sobic010G177100--Sobic003G412800 Sobic009G225500 Sobic009G225500 Sobic010G177100--Sobic009G225500 Sobic005G068800--Sobic001G507000 Sobic005G068800--Sobic004G156200 Sobic005G068800--Sobic004G095200 Sobic005G068800--Sobic006G120600 Sobic009G146250 Sobic009G146250 Sobic005G068800--Sobic009G146250 Sobic005G068800--Sobic006G195500 Sobic005G068800--Sobic003G183700 Sobic002G021200 Sobic002G021200 Sobic005G068800--Sobic002G021200 Sobic009G052100 Sobic009G052100 Sobic005G068800--Sobic009G052100 Sobic001G104500 Sobic001G104500 Sobic003G084200--Sobic001G104500 Sobic003G084200--Sobic007G050800 Sobic006G275500 Sobic006G275500 Sobic003G084200--Sobic006G275500 Sobic003G084200--Sobic005G157300 Sobic002G168000 Sobic002G168000 Sobic003G084200--Sobic002G168000 Sobic007G187700 Sobic007G187700 Sobic003G084200--Sobic007G187700 Sobic003G244000 Sobic003G244000 Sobic003G084200--Sobic003G244000 Sobic009G002200 Sobic009G002200 Sobic003G084200--Sobic009G002200 Sobic001G456400 Sobic001G456400 Sobic003G084200--Sobic001G456400 Sobic007G112100 Sobic007G112100 Sobic009G109300--Sobic007G112100 Sobic006G051000 Sobic006G051000 Sobic009G109300--Sobic006G051000 Sobic010G103700 Sobic010G103700 Sobic009G109300--Sobic010G103700 Sobic009G109300--Sobic006G195500 Sobic001G238900 Sobic001G238900 Sobic009G109300--Sobic001G238900 Sobic002G230800 Sobic002G230800 Sobic009G109300--Sobic002G230800 Sobic009G109300--Sobic003G183700 Sobic009G109300--Sobic003G179500 Sobic002G246900 Sobic002G246900 Sobic009G109300--Sobic002G246900 Sobic003G283600 Sobic003G283600 Sobic001G468500--Sobic003G283600 Sobic003G003700 Sobic003G003700 Sobic001G468500--Sobic003G003700 Sobic004G286700 Sobic004G286700 Sobic001G468500--Sobic004G286700 Sobic010G277300 Sobic010G277300 Sobic001G468500--Sobic010G277300 Sobic006G133700 Sobic006G133700 Sobic001G468500--Sobic006G133700 Sobic001G030400 Sobic001G030400 Sobic001G468500--Sobic001G030400 Sobic002G238500 Sobic002G238500 Sobic001G468500--Sobic002G238500 Sobic004G036800 Sobic004G036800 Sobic001G468500--Sobic004G036800 Sobic004G331200 Sobic004G331200 Sobic001G468500--Sobic004G331200 Sobic006G120600--Sobic010G103700 Sobic006G120600--Sobic003G183700 Sobic006G120600--Sobic006G195500 Sobic002G290000 Sobic002G290000 Sobic006G120600--Sobic002G290000 Sobic002G303800 Sobic002G303800 Sobic006G120600--Sobic002G303800 Sobic006G120600--Sobic003G179500 Sobic007G125300 Sobic007G125300 Sobic006G120600--Sobic007G125300 Sobic006G120600--Sobic009G087000 Sobic006G120600--Sobic006G051000
Octagon: transcription factors


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