Gene annotation
Transcriptome id Sobic.002G238500.2,Sobic.002G238500.4,Sobic.002G238500.3
Synonym Sb02g027630, PK5, D6PKL2
Functional annotation AGC_PVPK_like_kin82y.16 - ACG kinases include homologs to PKA, PKG and PKC, expressed
UniProt A0A1B6QD66
Pfam PF07714 PF00069
Panther DB PTHR24351 PTHR24351:SF101
NCBI CDD -
KEGG Orthology -
Gene Ontology GO:0006468; protein phosphorylation GO:0004672protein kinase activity GO:0005524ATP binding


Orthologs (automatic annotation)
TAIR AT5G47750 : D6 protein kinase like 2
RAP-DB (Rice) LOC_Os09g30150.1,LOC_Os09g30150.2,LOC_Os09g30150.3 : AGC_PVPK_like_kin82y.16 - ACG kinases include homologs to PKA, PKG and PKC, expressed
MaizeGDB (Corn) Zm00025a014155 , Zm00025a047384
Brachypodium KQJ90653 , KQJ90652 , KQJ90654 , KQJ98776 , KQJ98778 , KQJ98777
Barley HORVU5Hr1G071250.2 , HORVU5Hr1G071250.3 , HORVU5Hr1G071250.1 , HORVU5Hr1G071250.4
Wheat TraesCS5A02G253500 , TraesCS5B02G252500 , TraesCS5D02G261300
Populus -


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cDNA sequences
Sobic.002G238500


Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.005G068800 TOPBP1A - Similar to DNA replication protein TOPBP1 from, expressed K10728: topoisomerase (DNA) II binding protein 1
2 Sobic.002G218600 Disease resistance/zinc finger/chromosome condensation-like region protein, putative, expressed -
3 Sobic.001G468500 ethylene-responsive element-binding protein, putative, expressed -
4 Sobic.002G420500 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@expressed protein -
5 Sobic.010G052400 SET domain containing protein, expressed K11430: [histone H3]-lysine27 N-trimethyltransferase EZH2
6 Sobic.007G113300 BRASSINOSTEROID INSENSITIVE 1 precursor, putative, expressed -
7 Sobic.003G147500 PHS1, putative, expressed K14165: atypical dual specificity phosphatase
8 Sobic.009G028100 dnaJ domain containing protein, expressed K09510: DnaJ homolog subfamily B member 4
9 Sobic.007G218100 transmembrane receptor, putative, expressed -
10 Sobic.006G120600 AAA-type ATPase family protein, putative, expressed -
11 Sobic.008G100700 SSXT protein, putative, expressed -
12 Sobic.003G345000 CAMK_CAMK_like.1 - CAMK includes calcium/calmodulin depedent protein kinases, expressed K13412: calcium-dependent protein kinase
13 Sobic.003G283600 HVA22, putative, expressed -
14 Sobic.002G253900 growth regulator related protein, putative, expressed -
15 Sobic.002G315400 expressed protein -
16 Sobic.003G084200 SAG (Senescence-associated gene): up-regulated gene during dark-induced senescence.(PubMedID : 27586543)@expressed protein -
17 Sobic.007G043400 transaldolase, putative, expressed K00616: E2.2.1.2, talA, transaldolase
18 Sobic.001G296800 WD repeat-containing protein 8, putative, expressed -
19 Sobic.004G330600 GHMP kinases ATP-binding protein, putative, expressed K01597: MVD, diphosphomevalonate decarboxylase
20 Sobic.004G315700 kinesin motor domain containing protein, putative, expressed K11498: centromeric protein E


Gene co-expression network
sample Sobic002G238500 Sobic002G238500 Sobic005G068800 Sobic005G068800 Sobic002G238500--Sobic005G068800 Sobic002G218600 Sobic002G218600 Sobic002G238500--Sobic002G218600 Sobic001G468500 Sobic001G468500 Sobic002G238500--Sobic001G468500 Sobic002G420500 Sobic002G420500 Sobic002G238500--Sobic002G420500 Sobic010G052400 Sobic010G052400 Sobic002G238500--Sobic010G052400 Sobic007G113300 Sobic007G113300 Sobic002G238500--Sobic007G113300 Sobic003G147500 Sobic003G147500 Sobic002G238500--Sobic003G147500 Sobic009G028100 Sobic009G028100 Sobic002G238500--Sobic009G028100 Sobic007G218100 Sobic007G218100 Sobic002G238500--Sobic007G218100 Sobic001G507000 Sobic001G507000 Sobic005G068800--Sobic001G507000 Sobic004G156200 Sobic004G156200 Sobic005G068800--Sobic004G156200 Sobic004G095200 Sobic004G095200 Sobic005G068800--Sobic004G095200 Sobic006G120600 Sobic006G120600 Sobic005G068800--Sobic006G120600 Sobic009G146250 Sobic009G146250 Sobic005G068800--Sobic009G146250 Sobic006G195500 Sobic006G195500 Sobic005G068800--Sobic006G195500 Sobic003G183700 Sobic003G183700 Sobic005G068800--Sobic003G183700 Sobic002G021200 Sobic002G021200 Sobic005G068800--Sobic002G021200 Sobic009G052100 Sobic009G052100 Sobic005G068800--Sobic009G052100 Sobic004G263700 Sobic004G263700 Sobic002G218600--Sobic004G263700 Sobic001G261400 Sobic001G261400 Sobic002G218600--Sobic001G261400 Sobic002G218600--Sobic009G146250 Sobic002G218600--Sobic007G113300 Sobic002G230900 Sobic002G230900 Sobic002G218600--Sobic002G230900 Sobic002G218600--Sobic006G120600 Sobic010G103700 Sobic010G103700 Sobic002G218600--Sobic010G103700 Sobic001G304800 Sobic001G304800 Sobic002G218600--Sobic001G304800 Sobic003G179500 Sobic003G179500 Sobic002G218600--Sobic003G179500 Sobic003G283600 Sobic003G283600 Sobic001G468500--Sobic003G283600 Sobic003G003700 Sobic003G003700 Sobic001G468500--Sobic003G003700 Sobic004G286700 Sobic004G286700 Sobic001G468500--Sobic004G286700 Sobic010G277300 Sobic010G277300 Sobic001G468500--Sobic010G277300 Sobic006G133700 Sobic006G133700 Sobic001G468500--Sobic006G133700 Sobic001G030400 Sobic001G030400 Sobic001G468500--Sobic001G030400 Sobic001G468500--Sobic002G238500 Sobic004G036800 Sobic004G036800 Sobic001G468500--Sobic004G036800 Sobic004G331200 Sobic004G331200 Sobic001G468500--Sobic004G331200 Sobic002G420500--Sobic002G238500 Sobic002G420500--Sobic005G068800 Sobic001G515200 Sobic001G515200 Sobic002G420500--Sobic001G515200 Sobic008G118100 Sobic008G118100 Sobic002G420500--Sobic008G118100 Sobic002G420500--Sobic003G147500 Sobic007G112100 Sobic007G112100 Sobic002G420500--Sobic007G112100 Sobic001G464000 Sobic001G464000 Sobic002G420500--Sobic001G464000 Sobic003G412800 Sobic003G412800 Sobic002G420500--Sobic003G412800 Sobic007G219100 Sobic007G219100 Sobic002G420500--Sobic007G219100 Sobic004G306100 Sobic004G306100 Sobic010G052400--Sobic004G306100 Sobic010G103500 Sobic010G103500 Sobic010G052400--Sobic010G103500 Sobic003G409600 Sobic003G409600 Sobic010G052400--Sobic003G409600 Sobic002G271400 Sobic002G271400 Sobic010G052400--Sobic002G271400 Sobic006G127200 Sobic006G127200 Sobic010G052400--Sobic006G127200 Sobic002G260700 Sobic002G260700 Sobic010G052400--Sobic002G260700 Sobic004G001600 Sobic004G001600 Sobic010G052400--Sobic004G001600 Sobic001G296800 Sobic001G296800 Sobic010G052400--Sobic001G296800 Sobic001G425200 Sobic001G425200 Sobic010G052400--Sobic001G425200 Sobic004G233700 Sobic004G233700 Sobic007G113300--Sobic004G233700 Sobic007G113300--Sobic002G218600 Sobic008G100700 Sobic008G100700 Sobic007G113300--Sobic008G100700 Sobic007G113300--Sobic001G304800 Sobic007G113300--Sobic004G286700 Sobic010G067800 Sobic010G067800 Sobic007G113300--Sobic010G067800 Sobic007G113300--Sobic010G103700 Sobic007G113300--Sobic003G179500 Sobic008G090000 Sobic008G090000 Sobic007G113300--Sobic008G090000 Sobic006G016700 Sobic006G016700 Sobic003G147500--Sobic006G016700 Sobic006G275500 Sobic006G275500 Sobic003G147500--Sobic006G275500 Sobic009G224300 Sobic009G224300 Sobic003G147500--Sobic009G224300 Sobic003G147500--Sobic008G090000 Sobic010G250400 Sobic010G250400 Sobic003G147500--Sobic010G250400 Sobic002G168000 Sobic002G168000 Sobic003G147500--Sobic002G168000 Sobic003G147500--Sobic007G219100 Sobic004G123200 Sobic004G123200 Sobic003G147500--Sobic004G123200 Sobic003G147500--Sobic009G146250 Sobic002G367200 Sobic002G367200 Sobic009G028100--Sobic002G367200 Sobic009G028100--Sobic003G147500 Sobic009G012600 Sobic009G012600 Sobic009G028100--Sobic009G012600 Sobic001G460100 Sobic001G460100 Sobic009G028100--Sobic001G460100 Sobic009G028100--Sobic002G238500 Sobic003G122800 Sobic003G122800 Sobic009G028100--Sobic003G122800 Sobic007G050800 Sobic007G050800 Sobic009G028100--Sobic007G050800 Sobic004G291200 Sobic004G291200 Sobic009G028100--Sobic004G291200 Sobic002G158500 Sobic002G158500 Sobic009G028100--Sobic002G158500 Sobic001G532800 Sobic001G532800 Sobic007G218100--Sobic001G532800 Sobic007G218100--Sobic001G304800 Sobic004G052200 Sobic004G052200 Sobic007G218100--Sobic004G052200 Sobic002G230800 Sobic002G230800 Sobic007G218100--Sobic002G230800 Sobic003G246800 Sobic003G246800 Sobic007G218100--Sobic003G246800 Sobic007G218100--Sobic006G275500 Sobic002G392500 Sobic002G392500 Sobic007G218100--Sobic002G392500 Sobic001G104500 Sobic001G104500 Sobic007G218100--Sobic001G104500 Sobic008G159901 Sobic008G159901 Sobic007G218100--Sobic008G159901
Octagon: transcription factors


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