Gene annotation
Transcriptome id Sobic.002G420500.2
Synonym Sb02g043190
Functional annotation SAG (Senescence-associated gene): differentially expressed gene during developmental senescence. (PubMedID : 27586543)
expressed protein
UniProt A0A1W0W7W9
Pfam -
Panther DB PTHR33971 PTHR33971:SF4
NCBI CDD -
KEGG Orthology -
Gene Ontology -


Orthologs (automatic annotation)
TAIR AT1G11440 : -
RAP-DB (Rice) LOC_Os07g48420.1 : expressed protein
MaizeGDB (Corn) Zm00025a015462
Brachypodium -
Barley -
Wheat -
Populus -


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Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.002G238500 AGC_PVPK_like_kin82y.16 - ACG kinases include homologs to PKA, PKG and PKC, expressed -
2 Sobic.005G068800 TOPBP1A - Similar to DNA replication protein TOPBP1 from, expressed K10728: topoisomerase (DNA) II binding protein 1
3 Sobic.001G515200 - -
4 Sobic.008G118100 kelch repeat protein, putative, expressed -
5 Sobic.003G147500 PHS1, putative, expressed K14165: atypical dual specificity phosphatase
6 Sobic.007G112100 enoyl-acyl-carrier-protein reductase NADH, chloroplast precursor, expressed K00208: enoyl-[acyl-carrier protein] reductase I
7 Sobic.001G464000 SAG (Senescence-associated gene): up-regulated gene during salt-induced senescence.(PubMedID : 27586543)@BTBN24 - Bric-a-Brac, Tramtrack, Broad Complex BTB domain with non-phototropic hypocotyl 3 NPH3 domain, expressed -
8 Sobic.003G412800 Candidate orthologue to the genomic region of wheat Hessian fy resistance gene H32(PubMedID : 28624908)@expressed protein -
9 Sobic.007G219100 phosphatidylinositol transfer, putative, expressed -
10 Sobic.001G460100 heparanase-like protein precursor, putative, expressed K07964: heparanase
11 Sobic.001G507000 expressed protein -
12 Sobic.007G167800 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@dihydroxy-acid dehydratase, putative, expressed K01687: dihydroxy-acid dehydratase
13 Sobic.006G127200 kelch repeat protein, putative, expressed -
14 Sobic.004G015300 expressed protein K16587: HAUS augmin-like complex subunit 4
15 Sobic.002G351700 glucan endo-1,3-beta-glucosidase precursor, putative, expressed -
16 Sobic.004G129500 expressed protein -
17 Sobic.002G315400 expressed protein -
18 Sobic.007G043400 transaldolase, putative, expressed K00616: E2.2.1.2, talA, transaldolase
19 Sobic.002G158500 ankyrin, putative, expressed -
20 Sobic.002G218600 Disease resistance/zinc finger/chromosome condensation-like region protein, putative, expressed -


Gene co-expression network
sample Sobic002G420500 Sobic002G420500 Sobic002G238500 Sobic002G238500 Sobic002G420500--Sobic002G238500 Sobic005G068800 Sobic005G068800 Sobic002G420500--Sobic005G068800 Sobic001G515200 Sobic001G515200 Sobic002G420500--Sobic001G515200 Sobic008G118100 Sobic008G118100 Sobic002G420500--Sobic008G118100 Sobic003G147500 Sobic003G147500 Sobic002G420500--Sobic003G147500 Sobic007G112100 Sobic007G112100 Sobic002G420500--Sobic007G112100 Sobic001G464000 Sobic001G464000 Sobic002G420500--Sobic001G464000 Sobic003G412800 Sobic003G412800 Sobic002G420500--Sobic003G412800 Sobic007G219100 Sobic007G219100 Sobic002G420500--Sobic007G219100 Sobic002G238500--Sobic005G068800 Sobic002G218600 Sobic002G218600 Sobic002G238500--Sobic002G218600 Sobic001G468500 Sobic001G468500 Sobic002G238500--Sobic001G468500 Sobic002G238500--Sobic002G420500 Sobic010G052400 Sobic010G052400 Sobic002G238500--Sobic010G052400 Sobic007G113300 Sobic007G113300 Sobic002G238500--Sobic007G113300 Sobic002G238500--Sobic003G147500 Sobic009G028100 Sobic009G028100 Sobic002G238500--Sobic009G028100 Sobic007G218100 Sobic007G218100 Sobic002G238500--Sobic007G218100 Sobic001G507000 Sobic001G507000 Sobic005G068800--Sobic001G507000 Sobic004G156200 Sobic004G156200 Sobic005G068800--Sobic004G156200 Sobic004G095200 Sobic004G095200 Sobic005G068800--Sobic004G095200 Sobic006G120600 Sobic006G120600 Sobic005G068800--Sobic006G120600 Sobic009G146250 Sobic009G146250 Sobic005G068800--Sobic009G146250 Sobic006G195500 Sobic006G195500 Sobic005G068800--Sobic006G195500 Sobic003G183700 Sobic003G183700 Sobic005G068800--Sobic003G183700 Sobic002G021200 Sobic002G021200 Sobic005G068800--Sobic002G021200 Sobic009G052100 Sobic009G052100 Sobic005G068800--Sobic009G052100 Sobic001G515200--Sobic007G112100 Sobic003G179500 Sobic003G179500 Sobic001G515200--Sobic003G179500 Sobic001G515200--Sobic006G120600 Sobic008G127550 Sobic008G127550 Sobic001G515200--Sobic008G127550 Sobic001G515200--Sobic006G195500 Sobic001G515200--Sobic003G183700 Sobic009G109300 Sobic009G109300 Sobic001G515200--Sobic009G109300 Sobic002G190000 Sobic002G190000 Sobic001G515200--Sobic002G190000 Sobic002G303800 Sobic002G303800 Sobic001G515200--Sobic002G303800 Sobic007G050800 Sobic007G050800 Sobic008G118100--Sobic007G050800 Sobic002G187600 Sobic002G187600 Sobic008G118100--Sobic002G187600 Sobic004G286200 Sobic004G286200 Sobic008G118100--Sobic004G286200 Sobic006G281900 Sobic006G281900 Sobic008G118100--Sobic006G281900 Sobic009G225500 Sobic009G225500 Sobic008G118100--Sobic009G225500 Sobic002G095300 Sobic002G095300 Sobic008G118100--Sobic002G095300 Sobic009G002200 Sobic009G002200 Sobic008G118100--Sobic009G002200 Sobic008G090400 Sobic008G090400 Sobic008G118100--Sobic008G090400 Sobic005G157300 Sobic005G157300 Sobic008G118100--Sobic005G157300 Sobic006G016700 Sobic006G016700 Sobic003G147500--Sobic006G016700 Sobic006G275500 Sobic006G275500 Sobic003G147500--Sobic006G275500 Sobic009G224300 Sobic009G224300 Sobic003G147500--Sobic009G224300 Sobic008G090000 Sobic008G090000 Sobic003G147500--Sobic008G090000 Sobic010G250400 Sobic010G250400 Sobic003G147500--Sobic010G250400 Sobic002G168000 Sobic002G168000 Sobic003G147500--Sobic002G168000 Sobic003G147500--Sobic007G219100 Sobic004G123200 Sobic004G123200 Sobic003G147500--Sobic004G123200 Sobic003G147500--Sobic009G146250 Sobic007G112100--Sobic009G109300 Sobic001G532800 Sobic001G532800 Sobic007G112100--Sobic001G532800 Sobic004G032900 Sobic004G032900 Sobic007G112100--Sobic004G032900 Sobic002G158500 Sobic002G158500 Sobic007G112100--Sobic002G158500 Sobic002G236700 Sobic002G236700 Sobic007G112100--Sobic002G236700 Sobic007G112100--Sobic006G120600 Sobic001G140700 Sobic001G140700 Sobic007G112100--Sobic001G140700 Sobic002G304400 Sobic002G304400 Sobic007G112100--Sobic002G304400 Sobic007G079600 Sobic007G079600 Sobic007G112100--Sobic007G079600 Sobic001G507200 Sobic001G507200 Sobic001G464000--Sobic001G507200 Sobic001G464000--Sobic002G420500 Sobic006G236700 Sobic006G236700 Sobic001G464000--Sobic006G236700 Sobic006G267500 Sobic006G267500 Sobic001G464000--Sobic006G267500 Sobic002G035600 Sobic002G035600 Sobic001G464000--Sobic002G035600 Sobic001G464000--Sobic002G238500 Sobic010G067600 Sobic010G067600 Sobic001G464000--Sobic010G067600 Sobic007G043400 Sobic007G043400 Sobic001G464000--Sobic007G043400 Sobic002G260700 Sobic002G260700 Sobic001G464000--Sobic002G260700 Sobic003G412800--Sobic003G179500 Sobic010G079100 Sobic010G079100 Sobic003G412800--Sobic010G079100 Sobic003G289800 Sobic003G289800 Sobic003G412800--Sobic003G289800 Sobic010G103700 Sobic010G103700 Sobic003G412800--Sobic010G103700 Sobic001G051300 Sobic001G051300 Sobic003G412800--Sobic001G051300 Sobic009G119700 Sobic009G119700 Sobic003G412800--Sobic009G119700 Sobic010G151700 Sobic010G151700 Sobic003G412800--Sobic010G151700 Sobic002G351700 Sobic002G351700 Sobic003G412800--Sobic002G351700 Sobic009G189200 Sobic009G189200 Sobic003G412800--Sobic009G189200 Sobic007G219100--Sobic003G147500 Sobic003G292700 Sobic003G292700 Sobic007G219100--Sobic003G292700 Sobic003G409600 Sobic003G409600 Sobic007G219100--Sobic003G409600 Sobic007G219100--Sobic009G224300 Sobic001G407100 Sobic001G407100 Sobic007G219100--Sobic001G407100 Sobic007G219100--Sobic009G225500 Sobic006G255300 Sobic006G255300 Sobic007G219100--Sobic006G255300 Sobic007G219100--Sobic010G250400 Sobic007G219100--Sobic006G016700
Octagon: transcription factors


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