Gene annotation
Transcriptome id Sobic.001G515200.5,Sobic.001G515200.3,Sobic.001G515200.2,Sobic.001G515200.4
Synonym
Functional annotation -
UniProt A0A1B6QQP2 , A0A1B6QQP7
Pfam -
Panther DB -
NCBI CDD -
KEGG Orthology -
Gene Ontology -


Orthologs (automatic annotation)
TAIR -
RAP-DB (Rice) -
MaizeGDB (Corn) -
Brachypodium -
Barley -
Wheat -
Populus -


JBrowse

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Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.007G112100 enoyl-acyl-carrier-protein reductase NADH, chloroplast precursor, expressed K00208: enoyl-[acyl-carrier protein] reductase I
2 Sobic.003G179500 expressed protein K06676: BRRN1, BRN1, condensin complex subunit 2
3 Sobic.006G120600 AAA-type ATPase family protein, putative, expressed -
4 Sobic.008G127550 - -
5 Sobic.006G195500 DNA-binding protein, putative, expressed K10742: DNA replication ATP-dependent helicase Dna2
6 Sobic.003G183700 MCM4 - Putative minichromosome maintenance MCM complex subunit 4, expressed K02212: MCM4, DNA replication licensing factor MCM4
7 Sobic.009G109300 POLA4 - Putative DNA polymerase alpha complex subunit, expressed K02684: DNA primase small subunit
8 Sobic.002G190000 ZOS9-05 - C2H2 zinc finger protein, expressed -
9 Sobic.002G303800 expressed protein -
10 Sobic.002G420500 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@expressed protein -
11 Sobic.003G226700 kinesin motor domain containing protein, putative, expressed K10393: KIF2_24, kinesin family member 2/24
12 Sobic.003G289800 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@serine/threonine-protein kinase, putative, expressed -
13 Sobic.006G051000 POLA3 - Putative DNA polymerase alpha complex subunit, expressed K02685: DNA primase large subunit
14 Sobic.004G053900 expressed protein -
15 Sobic.003G292700 kinesin motor protein-related, putative, expressed K10406: kinesin family member C2/C3
16 Sobic.009G119700 acetyltransferase, GNAT family, putative, expressed -
17 Sobic.003G412800 Candidate orthologue to the genomic region of wheat Hessian fy resistance gene H32(PubMedID : 28624908)@expressed protein -
18 Sobic.002G290000 helicase, putative, expressed K15362: BRIP1, BACH1, fanconi anemia group J protein
19 Sobic.001G377700 expressed protein K10895: fanconi anemia group I protein
20 Sobic.006G127200 kelch repeat protein, putative, expressed -


Gene co-expression network
sample Sobic001G515200 Sobic001G515200 Sobic007G112100 Sobic007G112100 Sobic001G515200--Sobic007G112100 Sobic003G179500 Sobic003G179500 Sobic001G515200--Sobic003G179500 Sobic006G120600 Sobic006G120600 Sobic001G515200--Sobic006G120600 Sobic008G127550 Sobic008G127550 Sobic001G515200--Sobic008G127550 Sobic006G195500 Sobic006G195500 Sobic001G515200--Sobic006G195500 Sobic003G183700 Sobic003G183700 Sobic001G515200--Sobic003G183700 Sobic009G109300 Sobic009G109300 Sobic001G515200--Sobic009G109300 Sobic002G190000 Sobic002G190000 Sobic001G515200--Sobic002G190000 Sobic002G303800 Sobic002G303800 Sobic001G515200--Sobic002G303800 Sobic007G112100--Sobic009G109300 Sobic001G532800 Sobic001G532800 Sobic007G112100--Sobic001G532800 Sobic004G032900 Sobic004G032900 Sobic007G112100--Sobic004G032900 Sobic002G158500 Sobic002G158500 Sobic007G112100--Sobic002G158500 Sobic002G236700 Sobic002G236700 Sobic007G112100--Sobic002G236700 Sobic007G112100--Sobic006G120600 Sobic001G140700 Sobic001G140700 Sobic007G112100--Sobic001G140700 Sobic002G304400 Sobic002G304400 Sobic007G112100--Sobic002G304400 Sobic007G079600 Sobic007G079600 Sobic007G112100--Sobic007G079600 Sobic003G179500--Sobic003G183700 Sobic010G103700 Sobic010G103700 Sobic003G179500--Sobic010G103700 Sobic010G105400 Sobic010G105400 Sobic003G179500--Sobic010G105400 Sobic005G144600 Sobic005G144600 Sobic003G179500--Sobic005G144600 Sobic010G147700 Sobic010G147700 Sobic003G179500--Sobic010G147700 Sobic009G087000 Sobic009G087000 Sobic003G179500--Sobic009G087000 Sobic005G110535 Sobic005G110535 Sobic003G179500--Sobic005G110535 Sobic006G116500 Sobic006G116500 Sobic003G179500--Sobic006G116500 Sobic004G047100 Sobic004G047100 Sobic003G179500--Sobic004G047100 Sobic006G120600--Sobic010G103700 Sobic006G120600--Sobic003G183700 Sobic006G120600--Sobic006G195500 Sobic002G290000 Sobic002G290000 Sobic006G120600--Sobic002G290000 Sobic006G120600--Sobic002G303800 Sobic006G120600--Sobic003G179500 Sobic007G125300 Sobic007G125300 Sobic006G120600--Sobic007G125300 Sobic006G120600--Sobic009G087000 Sobic006G051000 Sobic006G051000 Sobic006G120600--Sobic006G051000 Sobic003G420300 Sobic003G420300 Sobic008G127550--Sobic003G420300 Sobic002G320600 Sobic002G320600 Sobic008G127550--Sobic002G320600 Sobic003G226700 Sobic003G226700 Sobic008G127550--Sobic003G226700 Sobic006G281400 Sobic006G281400 Sobic008G127550--Sobic006G281400 Sobic003G292700 Sobic003G292700 Sobic008G127550--Sobic003G292700 Sobic001G051300 Sobic001G051300 Sobic008G127550--Sobic001G051300 Sobic004G243900 Sobic004G243900 Sobic008G127550--Sobic004G243900 Sobic007G139500 Sobic007G139500 Sobic008G127550--Sobic007G139500 Sobic009G052100 Sobic009G052100 Sobic008G127550--Sobic009G052100 Sobic006G195500--Sobic006G051000 Sobic006G195500--Sobic003G183700 Sobic006G195500--Sobic010G103700 Sobic001G377700 Sobic001G377700 Sobic006G195500--Sobic001G377700 Sobic006G195500--Sobic009G087000 Sobic006G195500--Sobic006G120600 Sobic006G196600 Sobic006G196600 Sobic006G195500--Sobic006G196600 Sobic006G195500--Sobic005G110535 Sobic006G195500--Sobic003G179500 Sobic003G183700--Sobic006G051000 Sobic003G183700--Sobic009G087000 Sobic003G183700--Sobic006G195500 Sobic003G183700--Sobic010G103700 Sobic003G183700--Sobic003G179500 Sobic003G183700--Sobic005G110535 Sobic008G129200 Sobic008G129200 Sobic003G183700--Sobic008G129200 Sobic004G321400 Sobic004G321400 Sobic003G183700--Sobic004G321400 Sobic003G183700--Sobic010G147700 Sobic009G109300--Sobic007G112100 Sobic009G109300--Sobic006G051000 Sobic009G109300--Sobic010G103700 Sobic009G109300--Sobic006G195500 Sobic001G238900 Sobic001G238900 Sobic009G109300--Sobic001G238900 Sobic002G230800 Sobic002G230800 Sobic009G109300--Sobic002G230800 Sobic009G109300--Sobic003G183700 Sobic009G109300--Sobic003G179500 Sobic002G246900 Sobic002G246900 Sobic009G109300--Sobic002G246900 Sobic003G055600 Sobic003G055600 Sobic002G190000--Sobic003G055600 Sobic002G190000--Sobic001G377700 Sobic002G190000--Sobic001G238900 Sobic002G190000--Sobic005G110535 Sobic004G053900 Sobic004G053900 Sobic002G190000--Sobic004G053900 Sobic002G190000--Sobic002G290000 Sobic001G118800 Sobic001G118800 Sobic002G190000--Sobic001G118800 Sobic002G190000--Sobic002G246900 Sobic001G013400 Sobic001G013400 Sobic002G190000--Sobic001G013400 Sobic003G444300 Sobic003G444300 Sobic002G303800--Sobic003G444300 Sobic002G303800--Sobic006G120600 Sobic001G169800 Sobic001G169800 Sobic002G303800--Sobic001G169800 Sobic002G303800--Sobic003G183700 Sobic002G303800--Sobic010G103700 Sobic001G146900 Sobic001G146900 Sobic002G303800--Sobic001G146900 Sobic002G303800--Sobic003G179500 Sobic002G303800--Sobic006G051000 Sobic001G083300 Sobic001G083300 Sobic002G303800--Sobic001G083300
Octagon: transcription factors


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