Gene annotation
Transcriptome id Sobic.007G043400.1
Synonym Sb07g003600
Functional annotation transaldolase, putative, expressed
UniProt C5YGY0
Pfam PF00923
Panther DB PTHR10683 PTHR10683:SF10
NCBI CDD KOG2772; Transaldolase
KEGG Orthology K00616; E2.2.1.2, talA, transaldolase
Gene Ontology GO:0005975; carbohydrate metabolic process


Orthologs (automatic annotation)
TAIR AT1G12230 : Aldolase superfamily protein
RAP-DB (Rice) LOC_Os08g05830.1 : transaldolase, putative, expressed
MaizeGDB (Corn) Zm00025a030105
Brachypodium PNT66787
Barley HORVU7Hr1G071730.3 , HORVU7Hr1G071730.2 , HORVU7Hr1G071730.1 , HORVU7Hr1G071760.1 , HORVU7Hr1G071760.2 , HORVU7Hr1G071760.3
Wheat TraesCS7B02G202400 , TraesCS7A02G302300 , TraesCS7D02G297600
Populus -


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Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.002G133000 delta14-sterol reductase, putative, expressed K00222: TM7SF2, Delta14-sterol reductase
2 Sobic.004G330600 GHMP kinases ATP-binding protein, putative, expressed K01597: MVD, diphosphomevalonate decarboxylase
3 Sobic.001G296800 WD repeat-containing protein 8, putative, expressed -
4 Sobic.009G169200 outer membrane protein, OMP85 family protein, expressed K07277: SAM50, TOB55, outer membrane protein insertion porin family
5 Sobic.001G168100 OsFBD13 - F-box and FBD domain containing protein, expressed -
6 Sobic.003G223500 WD domain, G-beta repeat domain containing protein, expressed K14299: nucleoporin SEH1
7 Sobic.002G238500 AGC_PVPK_like_kin82y.16 - ACG kinases include homologs to PKA, PKG and PKC, expressed -
8 Sobic.006G029400 GDSL-like lipase/acylhydrolase, putative, expressed -
9 Sobic.008G083400 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@argininosuccinate synthase, chloroplast precursor, putative, expressed K01940: argG, argininosuccinate synthase
10 Sobic.001G468500 ethylene-responsive element-binding protein, putative, expressed -
11 Sobic.007G075100 potassium transporter, putative, expressed K03549: KUP system potassium uptake protein
12 Sobic.001G358800 protein phosphatase 2C, putative, expressed -
13 Sobic.001G507200 PIR, putative, expressed K05749: cytoplasmic FMR1 interacting protein
14 Sobic.002G399900 OsRhmbd13 - Putative Rhomboid homologue, expressed -
15 Sobic.008G090000 oxysterol-binding protein, putative, expressed -
16 Sobic.001G199500 heat shock protein DnaJ, putative, expressed K09531: DnaJ homolog subfamily C member 11
17 Sobic.004G036800 glucan endo-1,3-beta-glucosidase precursor, putative, expressed -
18 Sobic.001G140700 pyruvate kinase, putative, expressed K00873: PK, pyruvate kinase
19 Sobic.001G371100 nucleolar protein 5A, putative, expressed K14564: nucleolar protein 56
20 Sobic.010G172400 transmembrane 9 superfamily member, putative, expressed K17086: transmembrane 9 superfamily member 2/4


Gene co-expression network
sample Sobic007G043400 Sobic007G043400 Sobic002G133000 Sobic002G133000 Sobic007G043400--Sobic002G133000 Sobic004G330600 Sobic004G330600 Sobic007G043400--Sobic004G330600 Sobic001G296800 Sobic001G296800 Sobic007G043400--Sobic001G296800 Sobic009G169200 Sobic009G169200 Sobic007G043400--Sobic009G169200 Sobic001G168100 Sobic001G168100 Sobic007G043400--Sobic001G168100 Sobic003G223500 Sobic003G223500 Sobic007G043400--Sobic003G223500 Sobic002G238500 Sobic002G238500 Sobic007G043400--Sobic002G238500 Sobic006G029400 Sobic006G029400 Sobic007G043400--Sobic006G029400 Sobic008G083400 Sobic008G083400 Sobic007G043400--Sobic008G083400 Sobic002G303800 Sobic002G303800 Sobic002G133000--Sobic002G303800 Sobic002G133000--Sobic007G043400 Sobic005G088900 Sobic005G088900 Sobic002G133000--Sobic005G088900 Sobic002G133000--Sobic004G330600 Sobic004G208100 Sobic004G208100 Sobic002G133000--Sobic004G208100 Sobic006G120600 Sobic006G120600 Sobic002G133000--Sobic006G120600 Sobic001G371100 Sobic001G371100 Sobic002G133000--Sobic001G371100 Sobic010G021900 Sobic010G021900 Sobic002G133000--Sobic010G021900 Sobic004G047500 Sobic004G047500 Sobic002G133000--Sobic004G047500 Sobic004G330600--Sobic007G043400 Sobic008G090000 Sobic008G090000 Sobic004G330600--Sobic008G090000 Sobic006G275500 Sobic006G275500 Sobic004G330600--Sobic006G275500 Sobic006G094100 Sobic006G094100 Sobic004G330600--Sobic006G094100 Sobic009G188900 Sobic009G188900 Sobic004G330600--Sobic009G188900 Sobic001G290500 Sobic001G290500 Sobic004G330600--Sobic001G290500 Sobic009G045300 Sobic009G045300 Sobic004G330600--Sobic009G045300 Sobic004G330600--Sobic002G133000 Sobic006G281900 Sobic006G281900 Sobic004G330600--Sobic006G281900 Sobic009G212100 Sobic009G212100 Sobic001G296800--Sobic009G212100 Sobic004G315700 Sobic004G315700 Sobic001G296800--Sobic004G315700 Sobic010G103500 Sobic010G103500 Sobic001G296800--Sobic010G103500 Sobic001G487200 Sobic001G487200 Sobic001G296800--Sobic001G487200 Sobic004G129500 Sobic004G129500 Sobic001G296800--Sobic004G129500 Sobic001G361200 Sobic001G361200 Sobic001G296800--Sobic001G361200 Sobic002G370400 Sobic002G370400 Sobic001G296800--Sobic002G370400 Sobic001G212600 Sobic001G212600 Sobic001G296800--Sobic001G212600 Sobic009G052100 Sobic009G052100 Sobic001G296800--Sobic009G052100 Sobic003G118400 Sobic003G118400 Sobic009G169200--Sobic003G118400 Sobic006G143500 Sobic006G143500 Sobic009G169200--Sobic006G143500 Sobic003G109200 Sobic003G109200 Sobic009G169200--Sobic003G109200 Sobic009G169200--Sobic007G043400 Sobic001G286100 Sobic001G286100 Sobic009G169200--Sobic001G286100 Sobic001G285300 Sobic001G285300 Sobic009G169200--Sobic001G285300 Sobic009G169200--Sobic006G029400 Sobic002G054000 Sobic002G054000 Sobic009G169200--Sobic002G054000 Sobic002G304400 Sobic002G304400 Sobic009G169200--Sobic002G304400 Sobic002G177500 Sobic002G177500 Sobic001G168100--Sobic002G177500 Sobic001G013300 Sobic001G013300 Sobic001G168100--Sobic001G013300 Sobic004G285000 Sobic004G285000 Sobic001G168100--Sobic004G285000 Sobic002G223300 Sobic002G223300 Sobic001G168100--Sobic002G223300 Sobic001G168100--Sobic003G223500 Sobic001G168100--Sobic007G043400 Sobic003G408300 Sobic003G408300 Sobic001G168100--Sobic003G408300 Sobic002G339800 Sobic002G339800 Sobic001G168100--Sobic002G339800 Sobic001G023800 Sobic001G023800 Sobic001G168100--Sobic001G023800 Sobic001G061800 Sobic001G061800 Sobic003G223500--Sobic001G061800 Sobic005G178700 Sobic005G178700 Sobic003G223500--Sobic005G178700 Sobic004G011000 Sobic004G011000 Sobic003G223500--Sobic004G011000 Sobic001G226000 Sobic001G226000 Sobic003G223500--Sobic001G226000 Sobic003G223500--Sobic001G168100 Sobic002G334600 Sobic002G334600 Sobic003G223500--Sobic002G334600 Sobic003G223500--Sobic007G043400 Sobic007G053400 Sobic007G053400 Sobic003G223500--Sobic007G053400 Sobic002G218700 Sobic002G218700 Sobic003G223500--Sobic002G218700 Sobic005G068800 Sobic005G068800 Sobic002G238500--Sobic005G068800 Sobic002G218600 Sobic002G218600 Sobic002G238500--Sobic002G218600 Sobic001G468500 Sobic001G468500 Sobic002G238500--Sobic001G468500 Sobic002G420500 Sobic002G420500 Sobic002G238500--Sobic002G420500 Sobic010G052400 Sobic010G052400 Sobic002G238500--Sobic010G052400 Sobic007G113300 Sobic007G113300 Sobic002G238500--Sobic007G113300 Sobic003G147500 Sobic003G147500 Sobic002G238500--Sobic003G147500 Sobic009G028100 Sobic009G028100 Sobic002G238500--Sobic009G028100 Sobic007G218100 Sobic007G218100 Sobic002G238500--Sobic007G218100 Sobic002G297600 Sobic002G297600 Sobic006G029400--Sobic002G297600 Sobic004G075200 Sobic004G075200 Sobic006G029400--Sobic004G075200 Sobic002G254500 Sobic002G254500 Sobic006G029400--Sobic002G254500 Sobic009G041800 Sobic009G041800 Sobic006G029400--Sobic009G041800 Sobic001G413100 Sobic001G413100 Sobic006G029400--Sobic001G413100 Sobic002G399900 Sobic002G399900 Sobic006G029400--Sobic002G399900 Sobic001G035400 Sobic001G035400 Sobic006G029400--Sobic001G035400 Sobic003G008600 Sobic003G008600 Sobic006G029400--Sobic003G008600 Sobic002G264300 Sobic002G264300 Sobic006G029400--Sobic002G264300 Sobic006G251600 Sobic006G251600 Sobic008G083400--Sobic006G251600 Sobic001G432300 Sobic001G432300 Sobic008G083400--Sobic001G432300 Sobic008G083400--Sobic001G371100 Sobic004G249300 Sobic004G249300 Sobic008G083400--Sobic004G249300 Sobic009G081500 Sobic009G081500 Sobic008G083400--Sobic009G081500 Sobic002G110400 Sobic002G110400 Sobic008G083400--Sobic002G110400 Sobic007G171200 Sobic007G171200 Sobic008G083400--Sobic007G171200 Sobic001G008500 Sobic001G008500 Sobic008G083400--Sobic001G008500 Sobic003G407800 Sobic003G407800 Sobic008G083400--Sobic003G407800
Octagon: transcription factors


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