Gene annotation
Transcriptome id Sobic.006G029400.3
Synonym Sb06g003040
Functional annotation GDSL-like lipase/acylhydrolase, putative, expressed
UniProt A0A1Z5RCL7
Pfam PF00657
Panther DB PTHR14209 PTHR14209:SF2
NCBI CDD KOG3035; Isoamyl acetate-hydrolyzing esterase
KEGG Orthology -
Gene Ontology GO:0016788; hydrolase activity, acting on ester bonds


Orthologs (automatic annotation)
TAIR AT5G62930 : SGNH hydrolase-type esterase superfamily protein
RAP-DB (Rice) LOC_Os10g33690.1 : GDSL-like lipase/acylhydrolase, putative, expressed
MaizeGDB (Corn) Zm00025a022910 , Zm00025a012500
Brachypodium KQK03294 , PNT70539 , KQK04423 , KQK04424
Barley -
Wheat TraesCS7D02G037200 , TraesCS7A02G041500 , TraesCS4A02G445000 , TraesCS4A02G445000 , TraesCS4A02G445000 , TraesCS4A02G445000 , TraesCS4A02G445000
Populus -


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Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.002G297600 DHHC zinc finger domain containing protein, expressed K18932: palmitoyltransferase
2 Sobic.004G075200 protein kinase PKN/PRK1, effector, putative, expressed -
3 Sobic.002G254500 oxidoreductase, putative, expressed K18160: NADH dehydrogenase [ubiquinone] 1 alpha subcomplex assembly factor 2
4 Sobic.009G041800 PPR repeat domain containing protein, putative, expressed -
5 Sobic.001G413100 nucleotide binding protein, putative, expressed -
6 Sobic.002G399900 OsRhmbd13 - Putative Rhomboid homologue, expressed -
7 Sobic.001G035400 ras-related protein, putative, expressed K07901: RAB8A, Ras-related protein Rab-8A
8 Sobic.003G008600 eukaryotic translation initiation factor 3 subunit E-interacting protein, putative, expressed K15029: translation initiation factor 3 subunit L
9 Sobic.002G264300 sterol-4-alpha-carboxylate 3-dehydrogenase, decarboxylating, putative, expressed K07748: NSDHL, sterol-4alpha-carboxylate 3-dehydrogenase (decarboxylating)
10 Sobic.004G326600 T-complex protein, putative, expressed K09493: CCT1, T-complex protein 1 subunit alpha
11 Sobic.003G118400 expressed protein -
12 Sobic.007G022700 proteasome subunit, putative, expressed K12177: COPS3, COP9 signalosome complex subunit 3
13 Sobic.003G130000 outer mitochondrial membrane porin, putative, expressed K11518: mitochondrial import receptor subunit TOM40
14 Sobic.004G215700 RAN GTPase-activating protein 1, putative, expressed K14319: Ran GTPase-activating protein 1
15 Sobic.007G043400 transaldolase, putative, expressed K00616: E2.2.1.2, talA, transaldolase
16 Sobic.009G169200 outer membrane protein, OMP85 family protein, expressed K07277: SAM50, TOB55, outer membrane protein insertion porin family
17 Sobic.010G172400 transmembrane 9 superfamily member, putative, expressed K17086: transmembrane 9 superfamily member 2/4
18 Sobic.001G116000 dynamin family protein, putative, expressed K01528: dynamin 1/3
19 Sobic.010G073500 3-oxoacyl-synthase, putative, expressed K09458: fabF, OXSM, 3-oxoacyl-[acyl-carrier-protein] synthase II
20 Sobic.002G304400 expressed protein -


Gene co-expression network
sample Sobic006G029400 Sobic006G029400 Sobic002G297600 Sobic002G297600 Sobic006G029400--Sobic002G297600 Sobic004G075200 Sobic004G075200 Sobic006G029400--Sobic004G075200 Sobic002G254500 Sobic002G254500 Sobic006G029400--Sobic002G254500 Sobic009G041800 Sobic009G041800 Sobic006G029400--Sobic009G041800 Sobic001G413100 Sobic001G413100 Sobic006G029400--Sobic001G413100 Sobic002G399900 Sobic002G399900 Sobic006G029400--Sobic002G399900 Sobic001G035400 Sobic001G035400 Sobic006G029400--Sobic001G035400 Sobic003G008600 Sobic003G008600 Sobic006G029400--Sobic003G008600 Sobic002G264300 Sobic002G264300 Sobic006G029400--Sobic002G264300 Sobic002G297600--Sobic006G029400 Sobic008G013300 Sobic008G013300 Sobic002G297600--Sobic008G013300 Sobic010G059700 Sobic010G059700 Sobic002G297600--Sobic010G059700 Sobic009G061000 Sobic009G061000 Sobic002G297600--Sobic009G061000 Sobic002G297600--Sobic002G264300 Sobic003G312400 Sobic003G312400 Sobic002G297600--Sobic003G312400 Sobic003G005900 Sobic003G005900 Sobic002G297600--Sobic003G005900 Sobic001G205900 Sobic001G205900 Sobic002G297600--Sobic001G205900 Sobic001G506000 Sobic001G506000 Sobic002G297600--Sobic001G506000 Sobic009G207200 Sobic009G207200 Sobic004G075200--Sobic009G207200 Sobic001G469200 Sobic001G469200 Sobic004G075200--Sobic001G469200 Sobic008G125000 Sobic008G125000 Sobic004G075200--Sobic008G125000 Sobic001G467100 Sobic001G467100 Sobic004G075200--Sobic001G467100 Sobic007G047600 Sobic007G047600 Sobic004G075200--Sobic007G047600 Sobic004G075200--Sobic006G029400 Sobic004G256300 Sobic004G256300 Sobic004G075200--Sobic004G256300 Sobic004G075200--Sobic003G008600 Sobic006G245700 Sobic006G245700 Sobic004G075200--Sobic006G245700 Sobic003G118400 Sobic003G118400 Sobic002G254500--Sobic003G118400 Sobic002G254500--Sobic006G029400 Sobic001G116000 Sobic001G116000 Sobic002G254500--Sobic001G116000 Sobic007G022700 Sobic007G022700 Sobic002G254500--Sobic007G022700 Sobic010G277000 Sobic010G277000 Sobic002G254500--Sobic010G277000 Sobic001G460500 Sobic001G460500 Sobic002G254500--Sobic001G460500 Sobic002G254500--Sobic009G207200 Sobic002G254500--Sobic001G035400 Sobic002G423500 Sobic002G423500 Sobic002G254500--Sobic002G423500 Sobic003G130000 Sobic003G130000 Sobic009G041800--Sobic003G130000 Sobic004G212100 Sobic004G212100 Sobic009G041800--Sobic004G212100 Sobic001G011000 Sobic001G011000 Sobic009G041800--Sobic001G011000 Sobic002G367800 Sobic002G367800 Sobic009G041800--Sobic002G367800 Sobic001G167500 Sobic001G167500 Sobic009G041800--Sobic001G167500 Sobic009G041800--Sobic001G413100 Sobic001G268300 Sobic001G268300 Sobic009G041800--Sobic001G268300 Sobic003G113400 Sobic003G113400 Sobic009G041800--Sobic003G113400 Sobic010G134100 Sobic010G134100 Sobic009G041800--Sobic010G134100 Sobic001G413100--Sobic010G134100 Sobic001G413100--Sobic001G167500 Sobic001G413100--Sobic009G041800 Sobic008G084100 Sobic008G084100 Sobic001G413100--Sobic008G084100 Sobic004G069400 Sobic004G069400 Sobic001G413100--Sobic004G069400 Sobic001G176900 Sobic001G176900 Sobic001G413100--Sobic001G176900 Sobic002G304400 Sobic002G304400 Sobic001G413100--Sobic002G304400 Sobic003G388900 Sobic003G388900 Sobic001G413100--Sobic003G388900 Sobic003G388700 Sobic003G388700 Sobic001G413100--Sobic003G388700 Sobic006G265600 Sobic006G265600 Sobic002G399900--Sobic006G265600 Sobic010G172400 Sobic010G172400 Sobic002G399900--Sobic010G172400 Sobic002G182000 Sobic002G182000 Sobic002G399900--Sobic002G182000 Sobic002G142700 Sobic002G142700 Sobic002G399900--Sobic002G142700 Sobic003G222700 Sobic003G222700 Sobic002G399900--Sobic003G222700 Sobic001G115500 Sobic001G115500 Sobic002G399900--Sobic001G115500 Sobic001G474400 Sobic001G474400 Sobic002G399900--Sobic001G474400 Sobic001G123600 Sobic001G123600 Sobic002G399900--Sobic001G123600 Sobic001G507200 Sobic001G507200 Sobic002G399900--Sobic001G507200 Sobic004G344800 Sobic004G344800 Sobic001G035400--Sobic004G344800 Sobic006G203900 Sobic006G203900 Sobic001G035400--Sobic006G203900 Sobic001G035400--Sobic008G084100 Sobic007G092100 Sobic007G092100 Sobic001G035400--Sobic007G092100 Sobic009G164700 Sobic009G164700 Sobic001G035400--Sobic009G164700 Sobic002G087000 Sobic002G087000 Sobic001G035400--Sobic002G087000 Sobic001G073600 Sobic001G073600 Sobic001G035400--Sobic001G073600 Sobic001G443200 Sobic001G443200 Sobic001G035400--Sobic001G443200 Sobic001G035400--Sobic001G116000 Sobic001G008500 Sobic001G008500 Sobic003G008600--Sobic001G008500 Sobic003G008600--Sobic001G115500 Sobic003G008600--Sobic002G423500 Sobic002G365900 Sobic002G365900 Sobic003G008600--Sobic002G365900 Sobic002G208400 Sobic002G208400 Sobic003G008600--Sobic002G208400 Sobic004G215700 Sobic004G215700 Sobic003G008600--Sobic004G215700 Sobic003G008600--Sobic001G460500 Sobic003G008600--Sobic004G075200 Sobic003G008600--Sobic003G130000 Sobic002G264300--Sobic001G115500 Sobic010G073500 Sobic010G073500 Sobic002G264300--Sobic010G073500 Sobic002G126800 Sobic002G126800 Sobic002G264300--Sobic002G126800 Sobic009G151800 Sobic009G151800 Sobic002G264300--Sobic009G151800 Sobic001G373000 Sobic001G373000 Sobic002G264300--Sobic001G373000 Sobic002G264300--Sobic001G008500 Sobic004G030400 Sobic004G030400 Sobic002G264300--Sobic004G030400 Sobic006G071628 Sobic006G071628 Sobic002G264300--Sobic006G071628 Sobic002G264300--Sobic004G075200
Octagon: transcription factors


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