Gene annotation
Transcriptome id Sobic.002G297600.3,Sobic.002G297600.2,Sobic.002G297600.1
Synonym Sb02g032840
Functional annotation DHHC zinc finger domain containing protein, expressed
UniProt C5X8E9 , A0A1W0W6A9 , A0A1B6QE54
Pfam PF01529
Panther DB PTHR22883 PTHR22883:SF91
NCBI CDD KOG1315; Predicted DHHC-type Zn-finger protein
KEGG Orthology K18932; palmitoyltransferase
Gene Ontology GO:0008270; zinc ion binding


Orthologs (automatic annotation)
TAIR AT4G00840 : DHHC-type zinc finger family protein
RAP-DB (Rice) LOC_Os07g28460.1 : transposon protein, putative, unclassified, expressed
MaizeGDB (Corn) Zm00025a014590 , Zm00025a014573
Brachypodium KQK16359 , PNT75179
Barley -
Wheat -
Populus -


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Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.006G029400 GDSL-like lipase/acylhydrolase, putative, expressed -
2 Sobic.008G013300 expressed protein -
3 Sobic.010G059700 galactosyltransferase family protein, putative, expressed -
4 Sobic.009G061000 DNA binding protein, putative, expressed -
5 Sobic.002G264300 sterol-4-alpha-carboxylate 3-dehydrogenase, decarboxylating, putative, expressed K07748: NSDHL, sterol-4alpha-carboxylate 3-dehydrogenase (decarboxylating)
6 Sobic.003G312400 dymeclin, putative, expressed -
7 Sobic.003G005900 abscisic acid insensitive 8, putative, expressed -
8 Sobic.001G205900 oxidoreductase, putative, expressed K00472: prolyl 4-hydroxylase
9 Sobic.001G506000 N-acetylglucosaminyltransferase, putative, expressed -
10 Sobic.009G207200 ER lumen protein retaining receptor, putative, expressed K10949: ER lumen protein retaining receptor
11 Sobic.004G015300 expressed protein K16587: HAUS augmin-like complex subunit 4
12 Sobic.004G031800 expressed protein -
13 Sobic.009G002000 ankyrin repeat family protein, putative, expressed -
14 Sobic.003G410400 zinc finger, C3HC4 type domain containing protein, expressed -
15 Sobic.009G201800 MPPN domain containing protein, expressed K14313: NUP35, nuclear pore complex protein Nup53
16 Sobic.007G022700 proteasome subunit, putative, expressed K12177: COPS3, COP9 signalosome complex subunit 3
17 Sobic.009G073400 galactosyltransferase family protein, putative, expressed -
18 Sobic.007G036800 xylosyltransferase, putative, expressed -
19 Sobic.004G145600 expressed protein -
20 Sobic.010G168900 transporter, monovalent cation:proton antiporter-2 family, putative, expressed -


Gene co-expression network
sample Sobic002G297600 Sobic002G297600 Sobic006G029400 Sobic006G029400 Sobic002G297600--Sobic006G029400 Sobic008G013300 Sobic008G013300 Sobic002G297600--Sobic008G013300 Sobic010G059700 Sobic010G059700 Sobic002G297600--Sobic010G059700 Sobic009G061000 Sobic009G061000 Sobic002G297600--Sobic009G061000 Sobic002G264300 Sobic002G264300 Sobic002G297600--Sobic002G264300 Sobic003G312400 Sobic003G312400 Sobic002G297600--Sobic003G312400 Sobic003G005900 Sobic003G005900 Sobic002G297600--Sobic003G005900 Sobic001G205900 Sobic001G205900 Sobic002G297600--Sobic001G205900 Sobic001G506000 Sobic001G506000 Sobic002G297600--Sobic001G506000 Sobic006G029400--Sobic002G297600 Sobic004G075200 Sobic004G075200 Sobic006G029400--Sobic004G075200 Sobic002G254500 Sobic002G254500 Sobic006G029400--Sobic002G254500 Sobic009G041800 Sobic009G041800 Sobic006G029400--Sobic009G041800 Sobic001G413100 Sobic001G413100 Sobic006G029400--Sobic001G413100 Sobic002G399900 Sobic002G399900 Sobic006G029400--Sobic002G399900 Sobic001G035400 Sobic001G035400 Sobic006G029400--Sobic001G035400 Sobic003G008600 Sobic003G008600 Sobic006G029400--Sobic003G008600 Sobic006G029400--Sobic002G264300 Sobic008G013300--Sobic002G297600 Sobic001G115500 Sobic001G115500 Sobic008G013300--Sobic001G115500 Sobic003G361400 Sobic003G361400 Sobic008G013300--Sobic003G361400 Sobic002G318600 Sobic002G318600 Sobic008G013300--Sobic002G318600 Sobic007G010900 Sobic007G010900 Sobic008G013300--Sobic007G010900 Sobic009G073400 Sobic009G073400 Sobic008G013300--Sobic009G073400 Sobic003G259600 Sobic003G259600 Sobic008G013300--Sobic003G259600 Sobic008G013300--Sobic002G264300 Sobic008G040700 Sobic008G040700 Sobic008G013300--Sobic008G040700 Sobic007G036800 Sobic007G036800 Sobic010G059700--Sobic007G036800 Sobic002G306600 Sobic002G306600 Sobic010G059700--Sobic002G306600 Sobic009G063800 Sobic009G063800 Sobic010G059700--Sobic009G063800 Sobic003G224300 Sobic003G224300 Sobic010G059700--Sobic003G224300 Sobic007G146600 Sobic007G146600 Sobic010G059700--Sobic007G146600 Sobic003G222700 Sobic003G222700 Sobic010G059700--Sobic003G222700 Sobic003G148900 Sobic003G148900 Sobic010G059700--Sobic003G148900 Sobic004G145600 Sobic004G145600 Sobic010G059700--Sobic004G145600 Sobic007G022700 Sobic007G022700 Sobic010G059700--Sobic007G022700 Sobic006G267500 Sobic006G267500 Sobic009G061000--Sobic006G267500 Sobic009G061000--Sobic009G073400 Sobic001G437500 Sobic001G437500 Sobic009G061000--Sobic001G437500 Sobic002G276600 Sobic002G276600 Sobic009G061000--Sobic002G276600 Sobic001G159800 Sobic001G159800 Sobic009G061000--Sobic001G159800 Sobic010G090500 Sobic010G090500 Sobic009G061000--Sobic010G090500 Sobic009G206500 Sobic009G206500 Sobic009G061000--Sobic009G206500 Sobic009G167100 Sobic009G167100 Sobic009G061000--Sobic009G167100 Sobic001G051300 Sobic001G051300 Sobic009G061000--Sobic001G051300 Sobic002G264300--Sobic001G115500 Sobic010G073500 Sobic010G073500 Sobic002G264300--Sobic010G073500 Sobic002G126800 Sobic002G126800 Sobic002G264300--Sobic002G126800 Sobic009G151800 Sobic009G151800 Sobic002G264300--Sobic009G151800 Sobic001G373000 Sobic001G373000 Sobic002G264300--Sobic001G373000 Sobic001G008500 Sobic001G008500 Sobic002G264300--Sobic001G008500 Sobic004G030400 Sobic004G030400 Sobic002G264300--Sobic004G030400 Sobic006G071628 Sobic006G071628 Sobic002G264300--Sobic006G071628 Sobic002G264300--Sobic004G075200 Sobic003G252900 Sobic003G252900 Sobic003G312400--Sobic003G252900 Sobic003G410400 Sobic003G410400 Sobic003G312400--Sobic003G410400 Sobic003G319000 Sobic003G319000 Sobic003G312400--Sobic003G319000 Sobic004G168300 Sobic004G168300 Sobic003G312400--Sobic004G168300 Sobic003G092700 Sobic003G092700 Sobic003G312400--Sobic003G092700 Sobic010G168900 Sobic010G168900 Sobic003G312400--Sobic010G168900 Sobic006G129000 Sobic006G129000 Sobic003G312400--Sobic006G129000 Sobic003G312400--Sobic010G059700 Sobic003G312400--Sobic002G297600 Sobic005G114500 Sobic005G114500 Sobic003G005900--Sobic005G114500 Sobic003G130900 Sobic003G130900 Sobic003G005900--Sobic003G130900 Sobic006G265600 Sobic006G265600 Sobic003G005900--Sobic006G265600 Sobic003G293000 Sobic003G293000 Sobic003G005900--Sobic003G293000 Sobic001G474400 Sobic001G474400 Sobic003G005900--Sobic001G474400 Sobic004G151200 Sobic004G151200 Sobic003G005900--Sobic004G151200 Sobic001G012900 Sobic001G012900 Sobic003G005900--Sobic001G012900 Sobic002G014800 Sobic002G014800 Sobic003G005900--Sobic002G014800 Sobic009G207200 Sobic009G207200 Sobic003G005900--Sobic009G207200 Sobic001G205900--Sobic003G005900 Sobic003G062400 Sobic003G062400 Sobic001G205900--Sobic003G062400 Sobic001G205900--Sobic010G059700 Sobic004G358900 Sobic004G358900 Sobic001G205900--Sobic004G358900 Sobic008G129600 Sobic008G129600 Sobic001G205900--Sobic008G129600 Sobic004G256300 Sobic004G256300 Sobic001G205900--Sobic004G256300 Sobic001G205900--Sobic003G222700 Sobic001G205900--Sobic002G297600 Sobic001G205900--Sobic007G036800 Sobic001G487100 Sobic001G487100 Sobic001G506000--Sobic001G487100 Sobic001G506000--Sobic004G075200 Sobic001G506000--Sobic001G115500 Sobic005G175000 Sobic005G175000 Sobic001G506000--Sobic005G175000 Sobic001G506000--Sobic009G207200 Sobic003G122000 Sobic003G122000 Sobic001G506000--Sobic003G122000 Sobic001G469200 Sobic001G469200 Sobic001G506000--Sobic001G469200 Sobic007G165300 Sobic007G165300 Sobic001G506000--Sobic007G165300 Sobic002G280900 Sobic002G280900 Sobic001G506000--Sobic002G280900
Octagon: transcription factors


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