Gene annotation
Transcriptome id Sobic.008G013300.1
Synonym Sb08g001210
Functional annotation expressed protein
UniProt C5YQJ8
Pfam -
Panther DB PTHR34656 PTHR34656:SF1
NCBI CDD -
KEGG Orthology -
Gene Ontology -


Orthologs (automatic annotation)
TAIR AT4G03600 : -
RAP-DB (Rice) LOC_Os12g19860.1 : expressed protein
MaizeGDB (Corn) Zm00025a028953 , Zm00025a053686
Brachypodium -
Barley -
Wheat -
Populus -


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Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.002G297600 DHHC zinc finger domain containing protein, expressed K18932: palmitoyltransferase
2 Sobic.001G115500 importin-alpha re-exporter, putative, expressed K18423: CSE1, CAS, exportin-2 (importin alpha re-exporter)
3 Sobic.003G361400 nsp1-like C-terminal region family protein, expressed K14306: NUP62, nuclear pore complex protein Nup62
4 Sobic.002G318600 RNA recognition motif containing protein, putative, expressed -
5 Sobic.007G010900 esterase, putative, expressed -
6 Sobic.009G073400 galactosyltransferase family protein, putative, expressed -
7 Sobic.003G259600 ORC4 - Putative origin recognition complex subunit 4, expressed K02606: origin recognition complex subunit 4
8 Sobic.002G264300 sterol-4-alpha-carboxylate 3-dehydrogenase, decarboxylating, putative, expressed K07748: NSDHL, sterol-4alpha-carboxylate 3-dehydrogenase (decarboxylating)
9 Sobic.008G040700 mRNA-decapping enzyme, putative, expressed K12611: mRNA-decapping enzyme 1B
10 Sobic.001G373000 nucleoporin interacting component, putative, expressed K14309: NUP93, nuclear pore complex protein Nup93
11 Sobic.009G002000 ankyrin repeat family protein, putative, expressed -
12 Sobic.002G263200 expressed protein -
13 Sobic.004G057100 tubulin-specific chaperone E, putative, expressed -
14 Sobic.001G460500 T-complex protein, putative, expressed K09495: CCT3, T-complex protein 1 subunit gamma
15 Sobic.002G148300 - -
16 Sobic.006G179300 OsFBX64 - F-box domain containing protein, expressed -
17 Sobic.006G029400 GDSL-like lipase/acylhydrolase, putative, expressed -
18 Sobic.001G205900 oxidoreductase, putative, expressed K00472: prolyl 4-hydroxylase
19 Sobic.006G112100 expressed protein -
20 Sobic.008G125000 AP-3 complex subunit delta, putative, expressed K12396: AP-3 complex subunit delta


Gene co-expression network
sample Sobic008G013300 Sobic008G013300 Sobic002G297600 Sobic002G297600 Sobic008G013300--Sobic002G297600 Sobic001G115500 Sobic001G115500 Sobic008G013300--Sobic001G115500 Sobic003G361400 Sobic003G361400 Sobic008G013300--Sobic003G361400 Sobic002G318600 Sobic002G318600 Sobic008G013300--Sobic002G318600 Sobic007G010900 Sobic007G010900 Sobic008G013300--Sobic007G010900 Sobic009G073400 Sobic009G073400 Sobic008G013300--Sobic009G073400 Sobic003G259600 Sobic003G259600 Sobic008G013300--Sobic003G259600 Sobic002G264300 Sobic002G264300 Sobic008G013300--Sobic002G264300 Sobic008G040700 Sobic008G040700 Sobic008G013300--Sobic008G040700 Sobic006G029400 Sobic006G029400 Sobic002G297600--Sobic006G029400 Sobic002G297600--Sobic008G013300 Sobic010G059700 Sobic010G059700 Sobic002G297600--Sobic010G059700 Sobic009G061000 Sobic009G061000 Sobic002G297600--Sobic009G061000 Sobic002G297600--Sobic002G264300 Sobic003G312400 Sobic003G312400 Sobic002G297600--Sobic003G312400 Sobic003G005900 Sobic003G005900 Sobic002G297600--Sobic003G005900 Sobic001G205900 Sobic001G205900 Sobic002G297600--Sobic001G205900 Sobic001G506000 Sobic001G506000 Sobic002G297600--Sobic001G506000 Sobic008G125000 Sobic008G125000 Sobic001G115500--Sobic008G125000 Sobic001G008500 Sobic001G008500 Sobic001G115500--Sobic001G008500 Sobic003G008600 Sobic003G008600 Sobic001G115500--Sobic003G008600 Sobic004G249300 Sobic004G249300 Sobic001G115500--Sobic004G249300 Sobic009G102900 Sobic009G102900 Sobic001G115500--Sobic009G102900 Sobic002G208400 Sobic002G208400 Sobic001G115500--Sobic002G208400 Sobic001G115500--Sobic002G264300 Sobic001G436300 Sobic001G436300 Sobic001G115500--Sobic001G436300 Sobic001G373000 Sobic001G373000 Sobic001G115500--Sobic001G373000 Sobic003G361400--Sobic003G259600 Sobic003G361400--Sobic001G373000 Sobic002G219900 Sobic002G219900 Sobic003G361400--Sobic002G219900 Sobic004G038100 Sobic004G038100 Sobic003G361400--Sobic004G038100 Sobic001G013300 Sobic001G013300 Sobic003G361400--Sobic001G013300 Sobic002G043000 Sobic002G043000 Sobic003G361400--Sobic002G043000 Sobic001G033900 Sobic001G033900 Sobic003G361400--Sobic001G033900 Sobic002G372500 Sobic002G372500 Sobic003G361400--Sobic002G372500 Sobic003G360300 Sobic003G360300 Sobic003G361400--Sobic003G360300 Sobic006G242500 Sobic006G242500 Sobic002G318600--Sobic006G242500 Sobic002G430900 Sobic002G430900 Sobic002G318600--Sobic002G430900 Sobic002G394800 Sobic002G394800 Sobic002G318600--Sobic002G394800 Sobic004G287100 Sobic004G287100 Sobic002G318600--Sobic004G287100 Sobic002G318600--Sobic008G125000 Sobic005G120700 Sobic005G120700 Sobic002G318600--Sobic005G120700 Sobic002G318600--Sobic008G013300 Sobic002G318600--Sobic002G219900 Sobic002G017900 Sobic002G017900 Sobic002G318600--Sobic002G017900 Sobic009G105900 Sobic009G105900 Sobic007G010900--Sobic009G105900 Sobic007G010900--Sobic008G125000 Sobic003G307900 Sobic003G307900 Sobic007G010900--Sobic003G307900 Sobic004G047200 Sobic004G047200 Sobic007G010900--Sobic004G047200 Sobic007G010900--Sobic001G373000 Sobic006G056200 Sobic006G056200 Sobic007G010900--Sobic006G056200 Sobic007G010900--Sobic008G013300 Sobic007G010900--Sobic002G318600 Sobic006G233300 Sobic006G233300 Sobic007G010900--Sobic006G233300 Sobic009G073400--Sobic009G061000 Sobic003G345200 Sobic003G345200 Sobic009G073400--Sobic003G345200 Sobic003G017500 Sobic003G017500 Sobic009G073400--Sobic003G017500 Sobic006G173200 Sobic006G173200 Sobic009G073400--Sobic006G173200 Sobic001G159800 Sobic001G159800 Sobic009G073400--Sobic001G159800 Sobic006G172200 Sobic006G172200 Sobic009G073400--Sobic006G172200 Sobic004G146300 Sobic004G146300 Sobic009G073400--Sobic004G146300 Sobic009G206500 Sobic009G206500 Sobic009G073400--Sobic009G206500 Sobic010G090500 Sobic010G090500 Sobic009G073400--Sobic010G090500 Sobic003G259600--Sobic003G361400 Sobic003G259600--Sobic003G360300 Sobic003G259600--Sobic001G373000 Sobic003G331000 Sobic003G331000 Sobic003G259600--Sobic003G331000 Sobic003G259600--Sobic004G038100 Sobic010G269300 Sobic010G269300 Sobic003G259600--Sobic010G269300 Sobic003G028400 Sobic003G028400 Sobic003G259600--Sobic003G028400 Sobic002G142700 Sobic002G142700 Sobic003G259600--Sobic002G142700 Sobic001G334100 Sobic001G334100 Sobic003G259600--Sobic001G334100 Sobic002G264300--Sobic001G115500 Sobic010G073500 Sobic010G073500 Sobic002G264300--Sobic010G073500 Sobic002G126800 Sobic002G126800 Sobic002G264300--Sobic002G126800 Sobic009G151800 Sobic009G151800 Sobic002G264300--Sobic009G151800 Sobic002G264300--Sobic001G373000 Sobic002G264300--Sobic001G008500 Sobic004G030400 Sobic004G030400 Sobic002G264300--Sobic004G030400 Sobic006G071628 Sobic006G071628 Sobic002G264300--Sobic006G071628 Sobic004G075200 Sobic004G075200 Sobic002G264300--Sobic004G075200 Sobic003G227100 Sobic003G227100 Sobic008G040700--Sobic003G227100 Sobic003G240700 Sobic003G240700 Sobic008G040700--Sobic003G240700 Sobic004G145000 Sobic004G145000 Sobic008G040700--Sobic004G145000 Sobic003G104000 Sobic003G104000 Sobic008G040700--Sobic003G104000 Sobic003G194100 Sobic003G194100 Sobic008G040700--Sobic003G194100 SobicK004100 SobicK004100 Sobic008G040700--SobicK004100 Sobic001G003500 Sobic001G003500 Sobic008G040700--Sobic001G003500 Sobic003G099300 Sobic003G099300 Sobic008G040700--Sobic003G099300 Sobic003G050900 Sobic003G050900 Sobic008G040700--Sobic003G050900
Octagon: transcription factors


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