Gene annotation
Transcriptome id Sobic.009G169200.1
Synonym Sb09g023080
Functional annotation outer membrane protein, OMP85 family protein, expressed
UniProt C5YZE7
Pfam PF07244 PF01103
Panther DB PTHR12815 PTHR12815:SF15
NCBI CDD KOG2602; Predicted cell surface protein homologous to bacterial outer membrane proteins
KEGG Orthology K07277; SAM50, TOB55, outer membrane protein insertion porin family
Gene Ontology -


Orthologs (automatic annotation)
TAIR AT5G05520 : Outer membrane OMP85 family protein
RAP-DB (Rice) LOC_Os05g39390.1 : outer membrane protein, OMP85 family protein, expressed
MaizeGDB (Corn) Zm00025a037769
Brachypodium KQK05810
Barley HORVU1Hr1G070610.1 , HORVU3Hr1G087800.10 , HORVU3Hr1G087800.11 , HORVU3Hr1G087800.4 , HORVU3Hr1G087800.1 , HORVU3Hr1G087800.2 , HORVU3Hr1G087800.3 , HORVU3Hr1G087800.7 , HORVU3Hr1G087800.8 , HORVU3Hr1G087800.9
Wheat TraesCS3B02G382000 , TraesCS2D02G101900 , TraesCS1B02G305000 , TraesCS1D02G295900 , TraesCS1A02G296200 , TraesCS3D02G343400 , TraesCS3A02G349400
Populus -


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cDNA sequences
Sobic.009G169200


Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.003G118400 expressed protein -
2 Sobic.006G143500 expressed protein -
3 Sobic.003G109200 expressed protein -
4 Sobic.007G043400 transaldolase, putative, expressed K00616: E2.2.1.2, talA, transaldolase
5 Sobic.001G286100 Inositol 1, 3, 4-trisphosphate 5/6-kinase, putative, expressed K00913: inositol-1,3,4-trisphosphate 5/6-kinase / inositol-tetrakisphosphate 1-kinase
6 Sobic.001G285300 expressed protein -
7 Sobic.006G029400 GDSL-like lipase/acylhydrolase, putative, expressed -
8 Sobic.002G054000 ribosomal protein L4, putative, expressed K02930: RP-L4e, large subunit ribosomal protein L4e
9 Sobic.002G304400 expressed protein -
10 Sobic.001G336050 - K18635: protein SPIRAL1 and related proteins
11 Sobic.002G332200 proteasome inhibitor-related, putative, expressed K06700: proteasome inhibitor subunit 1 (PI31)
12 Sobic.006G120700 N-acetylglucosaminyl-phosphatidylinositol de-N-acetylase, putative, expressed K03434: N-acetylglucosaminylphosphatidylinositol deacetylase
13 Sobic.001G413100 nucleotide binding protein, putative, expressed -
14 Sobic.001G402600 expressed protein -
15 Sobic.002G133000 delta14-sterol reductase, putative, expressed K00222: TM7SF2, Delta14-sterol reductase
16 Sobic.007G036800 xylosyltransferase, putative, expressed -
17 Sobic.009G224600 SNARE domain containing protein, putative, expressed K08506: syntaxin of plants SYP7
18 Sobic.008G111700 expressed protein -
19 Sobic.009G060400 proline-rich family protein, putative, expressed -
20 Sobic.007G220900 ribosomal L9, putative, expressed K02939: RP-L9, MRPL9, large subunit ribosomal protein L9


Gene co-expression network
sample Sobic009G169200 Sobic009G169200 Sobic003G118400 Sobic003G118400 Sobic009G169200--Sobic003G118400 Sobic006G143500 Sobic006G143500 Sobic009G169200--Sobic006G143500 Sobic003G109200 Sobic003G109200 Sobic009G169200--Sobic003G109200 Sobic007G043400 Sobic007G043400 Sobic009G169200--Sobic007G043400 Sobic001G286100 Sobic001G286100 Sobic009G169200--Sobic001G286100 Sobic001G285300 Sobic001G285300 Sobic009G169200--Sobic001G285300 Sobic006G029400 Sobic006G029400 Sobic009G169200--Sobic006G029400 Sobic002G054000 Sobic002G054000 Sobic009G169200--Sobic002G054000 Sobic002G304400 Sobic002G304400 Sobic009G169200--Sobic002G304400 Sobic002G254500 Sobic002G254500 Sobic003G118400--Sobic002G254500 Sobic001G382200 Sobic001G382200 Sobic003G118400--Sobic001G382200 Sobic001G530800 Sobic001G530800 Sobic003G118400--Sobic001G530800 Sobic004G249300 Sobic004G249300 Sobic003G118400--Sobic004G249300 Sobic002G116500 Sobic002G116500 Sobic003G118400--Sobic002G116500 Sobic003G125100 Sobic003G125100 Sobic003G118400--Sobic003G125100 Sobic003G118400--Sobic009G169200 Sobic006G094600 Sobic006G094600 Sobic003G118400--Sobic006G094600 Sobic003G222700 Sobic003G222700 Sobic003G118400--Sobic003G222700 Sobic004G032000 Sobic004G032000 Sobic006G143500--Sobic004G032000 Sobic006G143500--Sobic001G285300 Sobic002G044000 Sobic002G044000 Sobic006G143500--Sobic002G044000 Sobic001G517600 Sobic001G517600 Sobic006G143500--Sobic001G517600 Sobic001G402300 Sobic001G402300 Sobic006G143500--Sobic001G402300 Sobic001G532100 Sobic001G532100 Sobic006G143500--Sobic001G532100 Sobic003G358300 Sobic003G358300 Sobic006G143500--Sobic003G358300 Sobic001G126200 Sobic001G126200 Sobic006G143500--Sobic001G126200 Sobic001G402600 Sobic001G402600 Sobic006G143500--Sobic001G402600 Sobic001G107300 Sobic001G107300 Sobic003G109200--Sobic001G107300 Sobic004G208100 Sobic004G208100 Sobic003G109200--Sobic004G208100 Sobic002G387800 Sobic002G387800 Sobic003G109200--Sobic002G387800 Sobic001G521100 Sobic001G521100 Sobic003G109200--Sobic001G521100 Sobic003G109200--Sobic009G169200 Sobic009G232500 Sobic009G232500 Sobic003G109200--Sobic009G232500 Sobic006G095300 Sobic006G095300 Sobic003G109200--Sobic006G095300 Sobic001G432100 Sobic001G432100 Sobic003G109200--Sobic001G432100 Sobic003G297200 Sobic003G297200 Sobic003G109200--Sobic003G297200 Sobic002G133000 Sobic002G133000 Sobic007G043400--Sobic002G133000 Sobic004G330600 Sobic004G330600 Sobic007G043400--Sobic004G330600 Sobic001G296800 Sobic001G296800 Sobic007G043400--Sobic001G296800 Sobic007G043400--Sobic009G169200 Sobic001G168100 Sobic001G168100 Sobic007G043400--Sobic001G168100 Sobic003G223500 Sobic003G223500 Sobic007G043400--Sobic003G223500 Sobic002G238500 Sobic002G238500 Sobic007G043400--Sobic002G238500 Sobic007G043400--Sobic006G029400 Sobic008G083400 Sobic008G083400 Sobic007G043400--Sobic008G083400 Sobic004G069400 Sobic004G069400 Sobic001G286100--Sobic004G069400 Sobic008G118300 Sobic008G118300 Sobic001G286100--Sobic008G118300 Sobic003G418400 Sobic003G418400 Sobic001G286100--Sobic003G418400 Sobic007G201000 Sobic007G201000 Sobic001G286100--Sobic007G201000 Sobic010G250000 Sobic010G250000 Sobic001G286100--Sobic010G250000 Sobic001G135200 Sobic001G135200 Sobic001G286100--Sobic001G135200 Sobic006G271000 Sobic006G271000 Sobic001G286100--Sobic006G271000 Sobic009G063800 Sobic009G063800 Sobic001G286100--Sobic009G063800 Sobic001G309200 Sobic001G309200 Sobic001G286100--Sobic001G309200 Sobic008G111700 Sobic008G111700 Sobic001G285300--Sobic008G111700 Sobic001G285300--Sobic001G532100 Sobic001G285300--Sobic006G143500 Sobic001G285300--Sobic002G044000 Sobic001G036700 Sobic001G036700 Sobic001G285300--Sobic001G036700 Sobic001G285300--Sobic001G126200 Sobic003G420700 Sobic003G420700 Sobic001G285300--Sobic003G420700 Sobic001G285300--Sobic001G402300 Sobic001G285300--Sobic006G094600 Sobic002G297600 Sobic002G297600 Sobic006G029400--Sobic002G297600 Sobic004G075200 Sobic004G075200 Sobic006G029400--Sobic004G075200 Sobic006G029400--Sobic002G254500 Sobic009G041800 Sobic009G041800 Sobic006G029400--Sobic009G041800 Sobic001G413100 Sobic001G413100 Sobic006G029400--Sobic001G413100 Sobic002G399900 Sobic002G399900 Sobic006G029400--Sobic002G399900 Sobic001G035400 Sobic001G035400 Sobic006G029400--Sobic001G035400 Sobic003G008600 Sobic003G008600 Sobic006G029400--Sobic003G008600 Sobic002G264300 Sobic002G264300 Sobic006G029400--Sobic002G264300 Sobic008G135000 Sobic008G135000 Sobic002G054000--Sobic008G135000 Sobic009G233400 Sobic009G233400 Sobic002G054000--Sobic009G233400 Sobic001G058900 Sobic001G058900 Sobic002G054000--Sobic001G058900 Sobic005G050500 Sobic005G050500 Sobic002G054000--Sobic005G050500 Sobic001G334300 Sobic001G334300 Sobic002G054000--Sobic001G334300 Sobic002G304900 Sobic002G304900 Sobic002G054000--Sobic002G304900 Sobic004G342400 Sobic004G342400 Sobic002G054000--Sobic004G342400 Sobic009G191200 Sobic009G191200 Sobic002G054000--Sobic009G191200 Sobic010G005300 Sobic010G005300 Sobic002G054000--Sobic010G005300 Sobic002G304400--Sobic001G413100 Sobic002G304400--Sobic008G118300 Sobic002G304400--Sobic004G069400 Sobic007G112100 Sobic007G112100 Sobic002G304400--Sobic007G112100 Sobic002G304400--Sobic001G286100 Sobic001G167500 Sobic001G167500 Sobic002G304400--Sobic001G167500 Sobic001G336050 Sobic001G336050 Sobic002G304400--Sobic001G336050 Sobic002G304400--Sobic001G521100 Sobic001G081900 Sobic001G081900 Sobic002G304400--Sobic001G081900
Octagon: transcription factors


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