Gene annotation
Transcriptome id Sobic.004G036800.1,Sobic.004G036800.2
Synonym Sb04g003170
Functional annotation glucan endo-1,3-beta-glucosidase precursor, putative, expressed
UniProt A0A194YMI7
Pfam PF07983 PF00332
Panther DB PTHR32227 PTHR32227:SF90
NCBI CDD -
KEGG Orthology -
Gene Ontology GO:0005975; carbohydrate metabolic process GO:0004553hydrolase activity, hydrolyzing O-glycosyl compounds


Orthologs (automatic annotation)
TAIR AT5G58090 : O-Glycosyl hydrolases family 17 protein
RAP-DB (Rice) LOC_Os02g04670.1 : glucan endo-1,3-beta-glucosidase precursor, putative, expressed
MaizeGDB (Corn) Zm00025a018944
Brachypodium KQJ93265 , KQJ93266
Barley HORVU6Hr1G019670.1 , HORVU6Hr1G019670.2
Wheat TraesCS6D02G098400 , TraesCS6B02G138300 , TraesCS6A02G110000
Populus -


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cDNA sequences
Sobic.004G036800


Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.004G343600 3-5 exoribonuclease CSL4, putative, expressed K07573: CSL4, exosome complex component CSL4
2 Sobic.001G468500 ethylene-responsive element-binding protein, putative, expressed -
3 Sobic.006G133700 transcription factor RF2a, putative, expressed -
4 Sobic.001G412500 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@expressed protein K18732: SARNP, CIP29, SAP domain-containing ribonucleoprotein
5 Sobic.007G129000 nucleobase-ascorbate transporter, putative, expressed -
6 Sobic.010G256200 expressed protein -
7 Sobic.001G369800 monocopper oxidase, putative, expressed -
8 Sobic.001G040300 expressed protein -
9 Sobic.010G265900 novel plant SNARE 11, putative, expressed K08494: novel plant SNARE
10 Sobic.002G386300 exosome complex exonuclease, putative, expressed K12587: MTR3, exosome complex component MTR3
11 Sobic.002G184900 SCO1 protein homolog, mitochondrial precursor, putative, expressed K07152: protein SCO1
12 Sobic.001G120400 phospholipase A2, putative, expressed K01047: PLA2G, secretory phospholipase A2
13 Sobic.007G043400 transaldolase, putative, expressed K00616: E2.2.1.2, talA, transaldolase
14 Sobic.001G154400 expp1 protein precursor, putative, expressed -
15 Sobic.001G336050 - K18635: protein SPIRAL1 and related proteins
16 Sobic.001G030400 protein kinase family protein, putative, expressed -
17 Sobic.003G084300 mediator of RNA polymerase II transcription subunit 22, putative, expressed K15139: mediator of RNA polymerase II transcription subunit 22
18 Sobic.010G032700 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@methyltransferase domain containing protein, expressed K11434: type I protein arginine methyltransferase
19 Sobic.003G003700 ABIL2, putative, expressed -
20 Sobic.009G064900 serine/threonine protein phosphatase 2A 59 kDa regulatory subunit Bgamma isoform, putative, expressed K11584: serine/threonine-protein phosphatase 2A regulatory subunit B'


Gene co-expression network
sample Sobic004G036800 Sobic004G036800 Sobic004G343600 Sobic004G343600 Sobic004G036800--Sobic004G343600 Sobic001G468500 Sobic001G468500 Sobic004G036800--Sobic001G468500 Sobic006G133700 Sobic006G133700 Sobic004G036800--Sobic006G133700 Sobic001G412500 Sobic001G412500 Sobic004G036800--Sobic001G412500 Sobic007G129000 Sobic007G129000 Sobic004G036800--Sobic007G129000 Sobic010G256200 Sobic010G256200 Sobic004G036800--Sobic010G256200 Sobic001G369800 Sobic001G369800 Sobic004G036800--Sobic001G369800 Sobic001G040300 Sobic001G040300 Sobic004G036800--Sobic001G040300 Sobic010G265900 Sobic010G265900 Sobic004G036800--Sobic010G265900 Sobic001G107300 Sobic001G107300 Sobic004G343600--Sobic001G107300 Sobic002G386300 Sobic002G386300 Sobic004G343600--Sobic002G386300 Sobic006G013900 Sobic006G013900 Sobic004G343600--Sobic006G013900 Sobic010G032700 Sobic010G032700 Sobic004G343600--Sobic010G032700 Sobic004G343600--Sobic004G036800 Sobic001G436300 Sobic001G436300 Sobic004G343600--Sobic001G436300 Sobic006G127500 Sobic006G127500 Sobic004G343600--Sobic006G127500 Sobic004G343600--Sobic001G412500 Sobic002G184900 Sobic002G184900 Sobic004G343600--Sobic002G184900 Sobic003G283600 Sobic003G283600 Sobic001G468500--Sobic003G283600 Sobic003G003700 Sobic003G003700 Sobic001G468500--Sobic003G003700 Sobic004G286700 Sobic004G286700 Sobic001G468500--Sobic004G286700 Sobic010G277300 Sobic010G277300 Sobic001G468500--Sobic010G277300 Sobic001G468500--Sobic006G133700 Sobic001G030400 Sobic001G030400 Sobic001G468500--Sobic001G030400 Sobic002G238500 Sobic002G238500 Sobic001G468500--Sobic002G238500 Sobic001G468500--Sobic004G036800 Sobic004G331200 Sobic004G331200 Sobic001G468500--Sobic004G331200 Sobic006G133700--Sobic001G030400 Sobic006G133700--Sobic001G468500 Sobic001G080200 Sobic001G080200 Sobic006G133700--Sobic001G080200 Sobic006G133700--Sobic003G283600 Sobic006G133700--Sobic004G036800 Sobic005G129700 Sobic005G129700 Sobic006G133700--Sobic005G129700 Sobic001G081100 Sobic001G081100 Sobic006G133700--Sobic001G081100 Sobic006G133700--Sobic001G369800 Sobic002G284100 Sobic002G284100 Sobic006G133700--Sobic002G284100 Sobic009G165500 Sobic009G165500 Sobic001G412500--Sobic009G165500 Sobic003G084300 Sobic003G084300 Sobic001G412500--Sobic003G084300 Sobic001G412500--Sobic004G343600 Sobic001G412500--Sobic006G013900 Sobic004G208100 Sobic004G208100 Sobic001G412500--Sobic004G208100 Sobic001G412500--Sobic001G107300 Sobic001G150033 Sobic001G150033 Sobic001G412500--Sobic001G150033 Sobic001G261549 Sobic001G261549 Sobic001G412500--Sobic001G261549 Sobic001G528600 Sobic001G528600 Sobic001G412500--Sobic001G528600 Sobic006G144700 Sobic006G144700 Sobic007G129000--Sobic006G144700 Sobic007G129000--Sobic010G265900 Sobic009G208900 Sobic009G208900 Sobic007G129000--Sobic009G208900 Sobic007G129000--Sobic004G036800 Sobic007G129000--Sobic001G080200 Sobic007G129000--Sobic004G286700 Sobic002G158900 Sobic002G158900 Sobic007G129000--Sobic002G158900 Sobic003G256900 Sobic003G256900 Sobic007G129000--Sobic003G256900 Sobic007G129000--Sobic001G468500 Sobic001G157600 Sobic001G157600 Sobic010G256200--Sobic001G157600 Sobic001G123201 Sobic001G123201 Sobic010G256200--Sobic001G123201 Sobic004G242000 Sobic004G242000 Sobic010G256200--Sobic004G242000 Sobic002G051200 Sobic002G051200 Sobic010G256200--Sobic002G051200 Sobic001G154400 Sobic001G154400 Sobic010G256200--Sobic001G154400 Sobic009G060400 Sobic009G060400 Sobic010G256200--Sobic009G060400 Sobic009G030400 Sobic009G030400 Sobic010G256200--Sobic009G030400 Sobic004G318400 Sobic004G318400 Sobic010G256200--Sobic004G318400 Sobic004G272900 Sobic004G272900 Sobic010G256200--Sobic004G272900 Sobic001G369800--Sobic002G284100 Sobic001G487200 Sobic001G487200 Sobic001G369800--Sobic001G487200 Sobic001G123100 Sobic001G123100 Sobic001G369800--Sobic001G123100 Sobic001G540700 Sobic001G540700 Sobic001G369800--Sobic001G540700 Sobic006G218900 Sobic006G218900 Sobic001G369800--Sobic006G218900 Sobic009G212100 Sobic009G212100 Sobic001G369800--Sobic009G212100 Sobic001G369800--Sobic003G283600 Sobic003G351900 Sobic003G351900 Sobic001G369800--Sobic003G351900 Sobic001G212600 Sobic001G212600 Sobic001G369800--Sobic001G212600 Sobic007G163700 Sobic007G163700 Sobic001G040300--Sobic007G163700 Sobic001G083200 Sobic001G083200 Sobic001G040300--Sobic001G083200 Sobic003G024800 Sobic003G024800 Sobic001G040300--Sobic003G024800 Sobic008G138600 Sobic008G138600 Sobic001G040300--Sobic008G138600 Sobic006G143500 Sobic006G143500 Sobic001G040300--Sobic006G143500 Sobic001G230900 Sobic001G230900 Sobic001G040300--Sobic001G230900 Sobic001G517600 Sobic001G517600 Sobic001G040300--Sobic001G517600 Sobic004G032000 Sobic004G032000 Sobic001G040300--Sobic004G032000 Sobic002G353500 Sobic002G353500 Sobic001G040300--Sobic002G353500 Sobic006G200000 Sobic006G200000 Sobic010G265900--Sobic006G200000 Sobic005G120500 Sobic005G120500 Sobic010G265900--Sobic005G120500 Sobic006G102900 Sobic006G102900 Sobic010G265900--Sobic006G102900 Sobic005G080900 Sobic005G080900 Sobic010G265900--Sobic005G080900 Sobic010G265900--Sobic003G084300 Sobic009G189200 Sobic009G189200 Sobic010G265900--Sobic009G189200 Sobic006G120700 Sobic006G120700 Sobic010G265900--Sobic006G120700 Sobic001G157800 Sobic001G157800 Sobic010G265900--Sobic001G157800 Sobic004G344500 Sobic004G344500 Sobic010G265900--Sobic004G344500
Octagon: transcription factors


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