Gene annotation
Transcriptome id Sobic.001G030400.1,Sobic.001G030400.2
Synonym Sb01g002850
Functional annotation protein kinase family protein, putative, expressed
UniProt C5WUX6
Pfam PF07714
Panther DB PTHR27001 PTHR27001:SF18
NCBI CDD KOG1187; Serine/threonine protein kinase
KEGG Orthology -
Gene Ontology GO:0006468; protein phosphorylation GO:0004672protein kinase activity


Orthologs (automatic annotation)
TAIR AT5G59010 : Protein kinase protein with tetratricopeptide repeat domain
RAP-DB (Rice) LOC_Os03g61010.1 : protein kinase family protein, putative, expressed
MaizeGDB (Corn) Zm00025a008854 , Zm00025a016406
Brachypodium KQK12389
Barley HORVU5Hr1G114850.8 , HORVU5Hr1G114850.11 , HORVU5Hr1G114850.16 , HORVU5Hr1G114850.17 , HORVU5Hr1G114850.10 , HORVU5Hr1G114850.12 , HORVU5Hr1G114850.13 , HORVU5Hr1G114850.14 , HORVU5Hr1G114850.15 , HORVU5Hr1G114850.18 , HORVU5Hr1G114850.19 , HORVU5Hr1G114850.2 , HORVU5Hr1G114850.3 , HORVU5Hr1G114850.1 , HORVU5Hr1G114850.6 , HORVU5Hr1G114850.7 , HORVU5Hr1G114850.4 , HORVU5Hr1G114850.5
Wheat TraesCS5A02G487000 , TraesCS5A02G487000 , TraesCS5D02G501100 , TraesCS5B02G500800 , TraesCS5B02G500800
Populus -


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Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.006G133700 transcription factor RF2a, putative, expressed -
2 Sobic.001G468500 ethylene-responsive element-binding protein, putative, expressed -
3 Sobic.003G084300 mediator of RNA polymerase II transcription subunit 22, putative, expressed K15139: mediator of RNA polymerase II transcription subunit 22
4 Sobic.002G247800 Highest expression level in primordial inflorescence(PubMedID : 27501690)@OsSPL17 - SBP-box gene family member, expressed -
5 Sobic.009G165500 Lung seven transmembrane receptor domain containing protein, putative, expressed -
6 Sobic.010G222100 MBTB10 - Bric-a-Brac, Tramtrack, Broad Complex BTB domain with Meprin and TRAF Homology MATH domain, expressed K10523: speckle-type POZ protein
7 Sobic.007G009000 expressed protein -
8 Sobic.004G331200 expressed protein -
9 Sobic.002G353200 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@OsBZR1(Ortholog in rice:Zhu et al. (2015))(PubMedID : 31659861)@BES1/BZR1 homolog protein, putative, expressed K14503: brassinosteroid resistant 1/2
10 Sobic.002G179150 - -
11 Sobic.009G124200 down-regulated TF in developmental senescence(PubMedID : 27586543)@SMOS1(Ortholog in rice:Hirano et al. (2017))(PubMedID : 31659924)@AP2 domain containing protein, expressed K09285: OVM, AP2-like factor, ANT lineage
12 Sobic.010G265900 novel plant SNARE 11, putative, expressed K08494: novel plant SNARE
13 Sobic.001G528600 remorin family protein, putative, expressed -
14 Sobic.009G224600 SNARE domain containing protein, putative, expressed K08506: syntaxin of plants SYP7
15 Sobic.001G107200 tubulin/FtsZ domain containing protein, putative, expressed K07374: tubulin alpha
16 Sobic.002G350400 tubulin/FtsZ domain containing protein, putative, expressed K07374: tubulin alpha
17 Sobic.005G129700 SAG (Senescence-associated gene): up-regulated gene during salt-induced senescence.(PubMedID : 27586543)@sex determination protein tasselseed-2, putative, expressed -
18 Sobic.006G207400 expressed protein -
19 Sobic.003G034600 CAMK_CAMK_like_Aur_like.1 - CAMK includes calcium/calmodulin depedent protein kinases, expressed K08850: aurora kinase, other
20 Sobic.003G003700 ABIL2, putative, expressed -


Gene co-expression network
sample Sobic001G030400 Sobic001G030400 Sobic006G133700 Sobic006G133700 Sobic001G030400--Sobic006G133700 Sobic001G468500 Sobic001G468500 Sobic001G030400--Sobic001G468500 Sobic003G084300 Sobic003G084300 Sobic001G030400--Sobic003G084300 Sobic002G247800 Sobic002G247800 Sobic001G030400--Sobic002G247800 Sobic009G165500 Sobic009G165500 Sobic001G030400--Sobic009G165500 Sobic010G222100 Sobic010G222100 Sobic001G030400--Sobic010G222100 Sobic007G009000 Sobic007G009000 Sobic001G030400--Sobic007G009000 Sobic004G331200 Sobic004G331200 Sobic001G030400--Sobic004G331200 Sobic002G353200 Sobic002G353200 Sobic001G030400--Sobic002G353200 Sobic006G133700--Sobic001G030400 Sobic006G133700--Sobic001G468500 Sobic001G080200 Sobic001G080200 Sobic006G133700--Sobic001G080200 Sobic003G283600 Sobic003G283600 Sobic006G133700--Sobic003G283600 Sobic004G036800 Sobic004G036800 Sobic006G133700--Sobic004G036800 Sobic005G129700 Sobic005G129700 Sobic006G133700--Sobic005G129700 Sobic001G081100 Sobic001G081100 Sobic006G133700--Sobic001G081100 Sobic001G369800 Sobic001G369800 Sobic006G133700--Sobic001G369800 Sobic002G284100 Sobic002G284100 Sobic006G133700--Sobic002G284100 Sobic001G468500--Sobic003G283600 Sobic003G003700 Sobic003G003700 Sobic001G468500--Sobic003G003700 Sobic004G286700 Sobic004G286700 Sobic001G468500--Sobic004G286700 Sobic010G277300 Sobic010G277300 Sobic001G468500--Sobic010G277300 Sobic001G468500--Sobic006G133700 Sobic001G468500--Sobic001G030400 Sobic002G238500 Sobic002G238500 Sobic001G468500--Sobic002G238500 Sobic001G468500--Sobic004G036800 Sobic001G468500--Sobic004G331200 Sobic001G157800 Sobic001G157800 Sobic003G084300--Sobic001G157800 Sobic003G084300--Sobic009G165500 Sobic009G189200 Sobic009G189200 Sobic003G084300--Sobic009G189200 Sobic003G011100 Sobic003G011100 Sobic003G084300--Sobic003G011100 Sobic002G385400 Sobic002G385400 Sobic003G084300--Sobic002G385400 Sobic010G265900 Sobic010G265900 Sobic003G084300--Sobic010G265900 Sobic002G258300 Sobic002G258300 Sobic003G084300--Sobic002G258300 Sobic006G200000 Sobic006G200000 Sobic003G084300--Sobic006G200000 Sobic006G102900 Sobic006G102900 Sobic003G084300--Sobic006G102900 Sobic007G225400 Sobic007G225400 Sobic002G247800--Sobic007G225400 Sobic002G179150 Sobic002G179150 Sobic002G247800--Sobic002G179150 Sobic004G170900 Sobic004G170900 Sobic002G247800--Sobic004G170900 Sobic001G470100 Sobic001G470100 Sobic002G247800--Sobic001G470100 Sobic005G142500 Sobic005G142500 Sobic002G247800--Sobic005G142500 Sobic004G285900 Sobic004G285900 Sobic002G247800--Sobic004G285900 Sobic002G247800--Sobic001G030400 Sobic010G159100 Sobic010G159100 Sobic002G247800--Sobic010G159100 Sobic002G247800--Sobic003G011100 Sobic009G165500--Sobic003G084300 Sobic001G505000 Sobic001G505000 Sobic009G165500--Sobic001G505000 Sobic006G149200 Sobic006G149200 Sobic009G165500--Sobic006G149200 Sobic010G238800 Sobic010G238800 Sobic009G165500--Sobic010G238800 Sobic010G054200 Sobic010G054200 Sobic009G165500--Sobic010G054200 Sobic001G429000 Sobic001G429000 Sobic009G165500--Sobic001G429000 Sobic008G135000 Sobic008G135000 Sobic009G165500--Sobic008G135000 Sobic001G412500 Sobic001G412500 Sobic009G165500--Sobic001G412500 Sobic006G201500 Sobic006G201500 Sobic009G165500--Sobic006G201500 Sobic002G289800 Sobic002G289800 Sobic010G222100--Sobic002G289800 Sobic009G033800 Sobic009G033800 Sobic010G222100--Sobic009G033800 Sobic010G222100--Sobic002G353200 Sobic010G215800 Sobic010G215800 Sobic010G222100--Sobic010G215800 Sobic001G289900 Sobic001G289900 Sobic010G222100--Sobic001G289900 Sobic010G222100--Sobic001G505000 Sobic010G222100--Sobic005G129700 Sobic007G132900 Sobic007G132900 Sobic010G222100--Sobic007G132900 Sobic003G279100 Sobic003G279100 Sobic010G222100--Sobic003G279100 Sobic008G035900 Sobic008G035900 Sobic007G009000--Sobic008G035900 Sobic001G230900 Sobic001G230900 Sobic007G009000--Sobic001G230900 Sobic007G009000--Sobic001G030400 Sobic007G009000--Sobic003G003700 Sobic007G009000--Sobic001G157800 Sobic003G024800 Sobic003G024800 Sobic007G009000--Sobic003G024800 Sobic004G134100 Sobic004G134100 Sobic007G009000--Sobic004G134100 Sobic001G402600 Sobic001G402600 Sobic007G009000--Sobic001G402600 Sobic001G445000 Sobic001G445000 Sobic007G009000--Sobic001G445000 Sobic004G331200--Sobic001G289900 Sobic010G105400 Sobic010G105400 Sobic004G331200--Sobic010G105400 Sobic001G078600 Sobic001G078600 Sobic004G331200--Sobic001G078600 Sobic001G528600 Sobic001G528600 Sobic004G331200--Sobic001G528600 Sobic006G191700 Sobic006G191700 Sobic004G331200--Sobic006G191700 Sobic004G331200--Sobic001G468500 Sobic003G444300 Sobic003G444300 Sobic004G331200--Sobic003G444300 Sobic001G255600 Sobic001G255600 Sobic004G331200--Sobic001G255600 Sobic008G096200 Sobic008G096200 Sobic004G331200--Sobic008G096200 Sobic002G353200--Sobic010G222100 Sobic002G353200--Sobic001G289900 Sobic002G353200--Sobic007G132900 Sobic001G300400 Sobic001G300400 Sobic002G353200--Sobic001G300400 Sobic002G353200--Sobic004G331200 Sobic003G102000 Sobic003G102000 Sobic002G353200--Sobic003G102000 Sobic002G353200--Sobic002G289800 Sobic002G353200--Sobic001G030400 Sobic003G410600 Sobic003G410600 Sobic002G353200--Sobic003G410600
Octagon: transcription factors


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