Gene annotation
Transcriptome id Sobic.001G464000.5,Sobic.001G464000.4,Sobic.001G464000.3
Synonym NPY2, Sb01g043540
Functional annotation SAG (Senescence-associated gene): up-regulated gene during salt-induced senescence. (PubMedID : 27586543)
BTBN24 - Bric-a-Brac, Tramtrack, Broad Complex BTB domain with non-phototropic hypocotyl 3 NPH3 domain, expressed
UniProt C5WTR8
Pfam PF00651 PF03000
Panther DB PTHR32370 PTHR32370:SF34
NCBI CDD -
KEGG Orthology -
Gene Ontology GO:0005515; protein binding


Orthologs (automatic annotation)
TAIR AT2G14820 : Phototropic-responsive NPH3 family protein
RAP-DB (Rice) LOC_Os03g10800.2,LOC_Os03g10800.1 : BTBN4 - Bric-a-Brac, Tramtrack, Broad Complex BTB domain with non-phototropic hypocotyl 3 NPH3 domain, expressed
MaizeGDB (Corn) Zm00025a001125 , Zm00025a053132
Brachypodium PNT77949 , PNT77952 , PNT77950 , KQK23030 , PNT77951 , PNT77947 , PNT77948
Barley HORVU4Hr1G069760.8 , HORVU4Hr1G069760.2 , HORVU4Hr1G069760.3 , HORVU4Hr1G069760.1 , HORVU4Hr1G069760.6 , HORVU4Hr1G069760.7 , HORVU4Hr1G069760.4 , HORVU4Hr1G069760.5 , HORVU4Hr1G069760.18 , HORVU4Hr1G069760.19 , HORVU4Hr1G069760.10 , HORVU4Hr1G069760.11 , HORVU4Hr1G069760.12 , HORVU4Hr1G069760.13 , HORVU4Hr1G069760.14 , HORVU4Hr1G069760.15 , HORVU4Hr1G069760.16 , HORVU4Hr1G069760.17 , HORVU4Hr1G069760.20
Wheat TraesCS4A02G048200 , TraesCS4B02G256600 , TraesCS4D02G256700
Populus -


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Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.001G507200 PIR, putative, expressed K05749: cytoplasmic FMR1 interacting protein
2 Sobic.002G420500 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@expressed protein -
3 Sobic.006G236700 "domain confirmed by Pfam database, expression supported by NCBI EST database, expressed in leaf, stem and root, expression induced by IAA, BR and ABA treatments"(PubMedID : 20528920)@multidrug resistance protein, putative, expressed K05658: ABCB1, ATP-binding cassette, subfamily B (MDR/TAP), member 1
4 Sobic.006G267500 katanin p80 WD40 repeat-containing subunit B1 homolog 1, putative, expressed K18643: katanin p80 WD40 repeat-containing subunit B1
5 Sobic.002G035600 receptor-like protein kinase 2 precursor, putative, expressed -
6 Sobic.002G238500 AGC_PVPK_like_kin82y.16 - ACG kinases include homologs to PKA, PKG and PKC, expressed -
7 Sobic.010G067600 expressed protein K16586: HAUS augmin-like complex subunit 3
8 Sobic.007G043400 transaldolase, putative, expressed K00616: E2.2.1.2, talA, transaldolase
9 Sobic.002G260700 ARF GTPase-activating domain-containing protein, putative, expressed K12489: Arf-GAP with coiled-coil, ANK repeat and PH domain-containing protein
10 Sobic.010G103500 ATMAP70 protein, putative, expressed -
11 Sobic.010G067800 integral membrane transporter family protein, putative, expressed -
12 Sobic.004G315700 kinesin motor domain containing protein, putative, expressed K11498: centromeric protein E
13 Sobic.008G141200 DUF1336 domain containing protein, expressed -
14 Sobic.010G054100 SHR5-receptor-like kinase, putative, expressed -
15 Sobic.003G283600 HVA22, putative, expressed -
16 Sobic.001G392200 CAS1 domain-containing protein 1 precursor, putative, expressed -
17 Sobic.010G151700 SAG (Senescence-associated gene): up-regulated gene during salt-induced senescence.(PubMedID : 27586543)@extra-large G-protein-related, putative, expressed -
18 Sobic.003G412800 Candidate orthologue to the genomic region of wheat Hessian fy resistance gene H32(PubMedID : 28624908)@expressed protein -
19 Sobic.009G052100 tubulin/FtsZ domain containing protein, putative, expressed K10389: tubulin gamma
20 Sobic.003G072900 OsRhmbd18 - Putative Rhomboid homologue, expressed -


Gene co-expression network
sample Sobic001G464000 Sobic001G464000 Sobic001G507200 Sobic001G507200 Sobic001G464000--Sobic001G507200 Sobic002G420500 Sobic002G420500 Sobic001G464000--Sobic002G420500 Sobic006G236700 Sobic006G236700 Sobic001G464000--Sobic006G236700 Sobic006G267500 Sobic006G267500 Sobic001G464000--Sobic006G267500 Sobic002G035600 Sobic002G035600 Sobic001G464000--Sobic002G035600 Sobic002G238500 Sobic002G238500 Sobic001G464000--Sobic002G238500 Sobic010G067600 Sobic010G067600 Sobic001G464000--Sobic010G067600 Sobic007G043400 Sobic007G043400 Sobic001G464000--Sobic007G043400 Sobic002G260700 Sobic002G260700 Sobic001G464000--Sobic002G260700 Sobic009G052100 Sobic009G052100 Sobic001G507200--Sobic009G052100 Sobic009G049200 Sobic009G049200 Sobic001G507200--Sobic009G049200 Sobic006G173200 Sobic006G173200 Sobic001G507200--Sobic006G173200 Sobic004G315700 Sobic004G315700 Sobic001G507200--Sobic004G315700 Sobic006G071628 Sobic006G071628 Sobic001G507200--Sobic006G071628 Sobic001G296800 Sobic001G296800 Sobic001G507200--Sobic001G296800 Sobic001G385400 Sobic001G385400 Sobic001G507200--Sobic001G385400 Sobic008G192700 Sobic008G192700 Sobic001G507200--Sobic008G192700 Sobic002G399900 Sobic002G399900 Sobic001G507200--Sobic002G399900 Sobic002G420500--Sobic002G238500 Sobic005G068800 Sobic005G068800 Sobic002G420500--Sobic005G068800 Sobic001G515200 Sobic001G515200 Sobic002G420500--Sobic001G515200 Sobic008G118100 Sobic008G118100 Sobic002G420500--Sobic008G118100 Sobic003G147500 Sobic003G147500 Sobic002G420500--Sobic003G147500 Sobic007G112100 Sobic007G112100 Sobic002G420500--Sobic007G112100 Sobic002G420500--Sobic001G464000 Sobic003G412800 Sobic003G412800 Sobic002G420500--Sobic003G412800 Sobic007G219100 Sobic007G219100 Sobic002G420500--Sobic007G219100 Sobic003G420100 Sobic003G420100 Sobic006G236700--Sobic003G420100 Sobic004G233700 Sobic004G233700 Sobic006G236700--Sobic004G233700 Sobic004G054000 Sobic004G054000 Sobic006G236700--Sobic004G054000 Sobic007G113300 Sobic007G113300 Sobic006G236700--Sobic007G113300 Sobic002G034301 Sobic002G034301 Sobic006G236700--Sobic002G034301 Sobic004G286700 Sobic004G286700 Sobic006G236700--Sobic004G286700 Sobic001G144200 Sobic001G144200 Sobic006G236700--Sobic001G144200 Sobic007G208100 Sobic007G208100 Sobic006G236700--Sobic007G208100 Sobic001G468500 Sobic001G468500 Sobic006G236700--Sobic001G468500 Sobic009G061000 Sobic009G061000 Sobic006G267500--Sobic009G061000 Sobic009G206500 Sobic009G206500 Sobic006G267500--Sobic009G206500 Sobic009G212100 Sobic009G212100 Sobic006G267500--Sobic009G212100 Sobic006G254500 Sobic006G254500 Sobic006G267500--Sobic006G254500 Sobic001G437500 Sobic001G437500 Sobic006G267500--Sobic001G437500 Sobic006G267500--Sobic004G315700 Sobic010G090500 Sobic010G090500 Sobic006G267500--Sobic010G090500 Sobic005G204700 Sobic005G204700 Sobic006G267500--Sobic005G204700 Sobic006G267500--Sobic001G296800 Sobic002G035600--Sobic001G464000 Sobic010G151700 Sobic010G151700 Sobic002G035600--Sobic010G151700 Sobic002G035600--Sobic006G236700 Sobic009G122600 Sobic009G122600 Sobic002G035600--Sobic009G122600 Sobic001G030400 Sobic001G030400 Sobic002G035600--Sobic001G030400 Sobic010G265900 Sobic010G265900 Sobic002G035600--Sobic010G265900 Sobic003G345200 Sobic003G345200 Sobic002G035600--Sobic003G345200 Sobic010G144900 Sobic010G144900 Sobic002G035600--Sobic010G144900 Sobic002G146601 Sobic002G146601 Sobic002G035600--Sobic002G146601 Sobic002G238500--Sobic005G068800 Sobic002G218600 Sobic002G218600 Sobic002G238500--Sobic002G218600 Sobic002G238500--Sobic001G468500 Sobic002G238500--Sobic002G420500 Sobic010G052400 Sobic010G052400 Sobic002G238500--Sobic010G052400 Sobic002G238500--Sobic007G113300 Sobic002G238500--Sobic003G147500 Sobic009G028100 Sobic009G028100 Sobic002G238500--Sobic009G028100 Sobic007G218100 Sobic007G218100 Sobic002G238500--Sobic007G218100 Sobic003G420300 Sobic003G420300 Sobic010G067600--Sobic003G420300 Sobic010G067600--Sobic009G212100 Sobic010G067600--Sobic009G052100 Sobic003G226700 Sobic003G226700 Sobic010G067600--Sobic003G226700 Sobic003G292700 Sobic003G292700 Sobic010G067600--Sobic003G292700 Sobic008G083500 Sobic008G083500 Sobic010G067600--Sobic008G083500 Sobic002G320600 Sobic002G320600 Sobic010G067600--Sobic002G320600 Sobic007G084200 Sobic007G084200 Sobic010G067600--Sobic007G084200 Sobic002G351700 Sobic002G351700 Sobic010G067600--Sobic002G351700 Sobic002G133000 Sobic002G133000 Sobic007G043400--Sobic002G133000 Sobic004G330600 Sobic004G330600 Sobic007G043400--Sobic004G330600 Sobic007G043400--Sobic001G296800 Sobic009G169200 Sobic009G169200 Sobic007G043400--Sobic009G169200 Sobic001G168100 Sobic001G168100 Sobic007G043400--Sobic001G168100 Sobic003G223500 Sobic003G223500 Sobic007G043400--Sobic003G223500 Sobic007G043400--Sobic002G238500 Sobic006G029400 Sobic006G029400 Sobic007G043400--Sobic006G029400 Sobic008G083400 Sobic008G083400 Sobic007G043400--Sobic008G083400 Sobic010G103500 Sobic010G103500 Sobic002G260700--Sobic010G103500 Sobic004G306100 Sobic004G306100 Sobic002G260700--Sobic004G306100 Sobic002G418100 Sobic002G418100 Sobic002G260700--Sobic002G418100 Sobic003G397100 Sobic003G397100 Sobic002G260700--Sobic003G397100 Sobic002G260700--Sobic009G052100 Sobic003G315700 Sobic003G315700 Sobic002G260700--Sobic003G315700 Sobic008G169400 Sobic008G169400 Sobic002G260700--Sobic008G169400 Sobic004G129500 Sobic004G129500 Sobic002G260700--Sobic004G129500 Sobic002G260700--Sobic010G052400
Octagon: transcription factors


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