Gene annotation
Transcriptome id Sobic.010G052400.1
Synonym Sb10g004560, CLF, ICU1, SDG1, SET1
Functional annotation SET domain containing protein, expressed
UniProt C9E7B5 , C5Z4W5
Pfam PF00856
Panther DB PTHR22884 PTHR22884:SF237
NCBI CDD KOG1079; Transcriptional repressor EZH1
KEGG Orthology K11430; [histone H3]-lysine27 N-trimethyltransferase EZH2
Gene Ontology GO:0005515; protein binding


Orthologs (automatic annotation)
TAIR AT2G23380 : SET domain-containing protein
RAP-DB (Rice) LOC_Os06g16390.1 : SET domain containing protein, expressed
MaizeGDB (Corn) Zm00025a041618
Brachypodium PNT76461 , PNT76460 , KQK19453 , KQK19454 , KQK19455 , KQK19456 , KQK22000 , PNT76459
Barley HORVU4Hr1G053740.9 , HORVU4Hr1G053740.8 , HORVU4Hr1G053740.5 , HORVU4Hr1G053740.4 , HORVU4Hr1G053740.7 , HORVU4Hr1G053740.6 , HORVU4Hr1G053740.1 , HORVU4Hr1G053740.3 , HORVU4Hr1G053740.2 , HORVU7Hr1G026910.35 , HORVU7Hr1G026910.34 , HORVU7Hr1G026910.37 , HORVU7Hr1G026910.36 , HORVU7Hr1G026910.33 , HORVU7Hr1G026910.19 , HORVU7Hr1G026910.18 , HORVU7Hr1G026910.13 , HORVU7Hr1G026910.11 , HORVU7Hr1G026910.10 , HORVU7Hr1G026910.17 , HORVU7Hr1G026910.16 , HORVU7Hr1G026910.15 , HORVU7Hr1G026910.14 , HORVU7Hr1G026840.20 , HORVU7Hr1G026840.21 , HORVU7Hr1G026910.9 , HORVU7Hr1G026910.8 , HORVU7Hr1G026910.3 , HORVU7Hr1G026910.2 , HORVU7Hr1G026910.1 , HORVU7Hr1G026910.7 , HORVU7Hr1G026910.6 , HORVU7Hr1G026910.5 , HORVU7Hr1G026910.4 , HORVU7Hr1G026840.19 , HORVU7Hr1G026840.18 , HORVU7Hr1G026840.11 , HORVU7Hr1G026840.10 , HORVU7Hr1G026840.13 , HORVU7Hr1G026840.12 , HORVU7Hr1G026840.15 , HORVU7Hr1G026840.14 , HORVU7Hr1G026840.17 , HORVU7Hr1G026840.16 , HORVU4Hr1G053740.10 , HORVU4Hr1G053740.13 , HORVU4Hr1G053740.15 , HORVU4Hr1G053740.14 , HORVU7Hr1G026910.30 , HORVU7Hr1G026910.32 , HORVU7Hr1G026840.9 , HORVU7Hr1G026840.8 , HORVU7Hr1G026840.5 , HORVU7Hr1G026840.4 , HORVU7Hr1G026840.7 , HORVU7Hr1G026840.6 , HORVU7Hr1G026840.1 , HORVU7Hr1G026840.3 , HORVU7Hr1G026840.2 , HORVU4Hr1G053740.12 , HORVU7Hr1G026910.22 , HORVU7Hr1G026910.23 , HORVU7Hr1G026910.20 , HORVU7Hr1G026910.21 , HORVU7Hr1G026910.26 , HORVU7Hr1G026910.27 , HORVU7Hr1G026910.24 , HORVU7Hr1G026910.25 , HORVU7Hr1G026910.28 , HORVU7Hr1G026910.29
Wheat TraesCS7A02G128300 , TraesCS4A02G121300 , TraesCS4A02G121300 , TraesCS4A02G121300 , TraesCS7B02G028500 , TraesCS7B02G028500 , TraesCS7B02G028500 , TraesCS7B02G028500 , TraesCS7A02G128600 , TraesCS7A02G128600 , TraesCS7D02G127400 , TraesCS4B02G181400 , TraesCS4B02G181400 , TraesCS4B02G181400 , TraesCS7D02G127100 , TraesCS7D02G127100 , TraesCS7B02G028200 , TraesCS7B02G028200 , TraesCS7B02G028200 , TraesCS4D02G184600 , TraesCS4D02G184600 , TraesCS4D02G184600
Populus -


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cDNA sequences
Sobic.010G052400


Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.004G306100 expressed protein -
2 Sobic.010G103500 ATMAP70 protein, putative, expressed -
3 Sobic.003G409600 zinc finger DHHC domain-containing protein, putative, expressed K16675: palmitoyltransferase ZDHHC9/14/18
4 Sobic.002G271400 RNA recognition motif containing protein, putative, expressed -
5 Sobic.006G127200 kelch repeat protein, putative, expressed -
6 Sobic.002G260700 ARF GTPase-activating domain-containing protein, putative, expressed K12489: Arf-GAP with coiled-coil, ANK repeat and PH domain-containing protein
7 Sobic.004G001600 kinesin motor domain containing protein, putative, expressed K10401: kinesin family member 18/19
8 Sobic.001G296800 WD repeat-containing protein 8, putative, expressed -
9 Sobic.001G425200 expressed protein -
10 Sobic.004G095200 Peptidase family C50, putative, expressed K02365: separase
11 Sobic.002G253900 growth regulator related protein, putative, expressed -
12 Sobic.007G036800 xylosyltransferase, putative, expressed -
13 Sobic.002G238500 AGC_PVPK_like_kin82y.16 - ACG kinases include homologs to PKA, PKG and PKC, expressed -
14 Sobic.004G015300 expressed protein K16587: HAUS augmin-like complex subunit 4
15 Sobic.001G154200 IQ calmodulin-binding motif domain containing protein, expressed -
16 Sobic.001G429200 AT hook motif family protein, expressed -
17 Sobic.007G072100 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@OsFBL44 - F-box domain and LRR containing protein, expressed -
18 Sobic.004G315700 kinesin motor domain containing protein, putative, expressed K11498: centromeric protein E
19 Sobic.005G068800 TOPBP1A - Similar to DNA replication protein TOPBP1 from, expressed K10728: topoisomerase (DNA) II binding protein 1
20 Sobic.009G060400 proline-rich family protein, putative, expressed -


Gene co-expression network
sample Sobic010G052400 Sobic010G052400 Sobic004G306100 Sobic004G306100 Sobic010G052400--Sobic004G306100 Sobic010G103500 Sobic010G103500 Sobic010G052400--Sobic010G103500 Sobic003G409600 Sobic003G409600 Sobic010G052400--Sobic003G409600 Sobic002G271400 Sobic002G271400 Sobic010G052400--Sobic002G271400 Sobic006G127200 Sobic006G127200 Sobic010G052400--Sobic006G127200 Sobic002G260700 Sobic002G260700 Sobic010G052400--Sobic002G260700 Sobic004G001600 Sobic004G001600 Sobic010G052400--Sobic004G001600 Sobic001G296800 Sobic001G296800 Sobic010G052400--Sobic001G296800 Sobic001G425200 Sobic001G425200 Sobic010G052400--Sobic001G425200 Sobic004G306100--Sobic002G271400 Sobic004G306100--Sobic010G103500 Sobic003G411700 Sobic003G411700 Sobic004G306100--Sobic003G411700 Sobic003G315700 Sobic003G315700 Sobic004G306100--Sobic003G315700 Sobic004G306100--Sobic006G127200 Sobic004G306100--Sobic003G409600 Sobic004G306100--Sobic002G260700 Sobic002G123600 Sobic002G123600 Sobic004G306100--Sobic002G123600 Sobic004G306100--Sobic010G052400 Sobic010G103500--Sobic002G260700 Sobic010G103500--Sobic004G306100 Sobic010G103500--Sobic003G411700 Sobic004G129500 Sobic004G129500 Sobic010G103500--Sobic004G129500 Sobic007G036800 Sobic007G036800 Sobic010G103500--Sobic007G036800 Sobic010G103500--Sobic001G296800 Sobic004G315700 Sobic004G315700 Sobic010G103500--Sobic004G315700 Sobic010G103500--Sobic002G271400 Sobic010G103500--Sobic010G052400 Sobic003G409600--Sobic004G306100 Sobic003G409600--Sobic003G315700 Sobic007G219100 Sobic007G219100 Sobic003G409600--Sobic007G219100 Sobic003G409600--Sobic002G271400 Sobic003G409600--Sobic006G127200 Sobic009G202801 Sobic009G202801 Sobic003G409600--Sobic009G202801 Sobic003G409600--Sobic010G103500 Sobic003G409600--Sobic003G411700 Sobic003G409600--Sobic010G052400 Sobic002G271400--Sobic004G306100 Sobic003G343200 Sobic003G343200 Sobic002G271400--Sobic003G343200 Sobic002G271400--Sobic006G127200 Sobic002G271400--Sobic003G411700 Sobic001G025900 Sobic001G025900 Sobic002G271400--Sobic001G025900 Sobic010G222800 Sobic010G222800 Sobic002G271400--Sobic010G222800 Sobic003G013800 Sobic003G013800 Sobic002G271400--Sobic003G013800 Sobic008G004900 Sobic008G004900 Sobic002G271400--Sobic008G004900 Sobic010G024000 Sobic010G024000 Sobic002G271400--Sobic010G024000 Sobic006G127200--Sobic004G306100 Sobic006G127200--Sobic002G271400 Sobic010G257500 Sobic010G257500 Sobic006G127200--Sobic010G257500 Sobic006G127200--Sobic002G123600 Sobic006G127200--Sobic003G409600 Sobic003G226700 Sobic003G226700 Sobic006G127200--Sobic003G226700 Sobic009G081800 Sobic009G081800 Sobic006G127200--Sobic009G081800 Sobic006G127200--Sobic010G103500 Sobic006G127200--Sobic001G025900 Sobic002G260700--Sobic010G103500 Sobic002G260700--Sobic004G306100 Sobic002G418100 Sobic002G418100 Sobic002G260700--Sobic002G418100 Sobic003G397100 Sobic003G397100 Sobic002G260700--Sobic003G397100 Sobic009G052100 Sobic009G052100 Sobic002G260700--Sobic009G052100 Sobic002G260700--Sobic003G315700 Sobic008G169400 Sobic008G169400 Sobic002G260700--Sobic008G169400 Sobic002G260700--Sobic004G129500 Sobic002G260700--Sobic010G052400 Sobic004G001600--Sobic010G103500 Sobic004G001600--Sobic004G306100 Sobic009G120400 Sobic009G120400 Sobic004G001600--Sobic009G120400 Sobic002G426100 Sobic002G426100 Sobic004G001600--Sobic002G426100 Sobic004G001600--Sobic003G315700 Sobic006G126800 Sobic006G126800 Sobic004G001600--Sobic006G126800 Sobic004G001600--Sobic010G052400 Sobic002G192900 Sobic002G192900 Sobic004G001600--Sobic002G192900 Sobic004G001600--Sobic003G409600 Sobic009G212100 Sobic009G212100 Sobic001G296800--Sobic009G212100 Sobic001G296800--Sobic004G315700 Sobic001G296800--Sobic010G103500 Sobic001G487200 Sobic001G487200 Sobic001G296800--Sobic001G487200 Sobic001G296800--Sobic004G129500 Sobic001G361200 Sobic001G361200 Sobic001G296800--Sobic001G361200 Sobic002G370400 Sobic002G370400 Sobic001G296800--Sobic002G370400 Sobic001G212600 Sobic001G212600 Sobic001G296800--Sobic001G212600 Sobic001G296800--Sobic009G052100 Sobic001G425200--Sobic003G411700 Sobic004G041100 Sobic004G041100 Sobic001G425200--Sobic004G041100 Sobic001G425200--Sobic010G103500 Sobic001G425200--Sobic001G212600 Sobic001G425200--Sobic002G271400 Sobic001G425200--Sobic004G306100 Sobic003G336900 Sobic003G336900 Sobic001G425200--Sobic003G336900 Sobic005G160200 Sobic005G160200 Sobic001G425200--Sobic005G160200 Sobic003G298900 Sobic003G298900 Sobic001G425200--Sobic003G298900
Octagon: transcription factors


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