Gene annotation
Transcriptome id Sobic.004G095200.1
Synonym RSW4, AESP, ESP
Functional annotation Peptidase family C50, putative, expressed
UniProt C5XYE3
Pfam PF03568
Panther DB PTHR12792
NCBI CDD -
KEGG Orthology K02365; separase
Gene Ontology GO:0008233; peptidase activity GO:0006508proteolysis GO:0005634nucleus


Orthologs (automatic annotation)
TAIR AT4G22970 : homolog of separase
RAP-DB (Rice) LOC_Os02g53120.1 : Peptidase family C50, putative, expressed
MaizeGDB (Corn) Zm00025a033072
Brachypodium -
Barley HORVU6Hr1G079730.25 , HORVU6Hr1G079730.24 , HORVU6Hr1G079730.27 , HORVU6Hr1G079730.26 , HORVU6Hr1G079730.21 , HORVU6Hr1G079730.20 , HORVU6Hr1G079730.22 , HORVU6Hr1G079730.28 , HORVU6Hr1G079730.33 , HORVU6Hr1G079730.39 , HORVU6Hr1G079730.32 , HORVU6Hr1G079730.30 , HORVU6Hr1G079730.31 , HORVU6Hr1G079730.36 , HORVU6Hr1G079730.37 , HORVU6Hr1G079730.34 , HORVU6Hr1G079730.35 , HORVU6Hr1G079730.29 , HORVU6Hr1G079730.2 , HORVU6Hr1G079730.3 , HORVU6Hr1G079730.1 , HORVU6Hr1G079730.4 , HORVU6Hr1G079730.5 , HORVU6Hr1G079730.8 , HORVU6Hr1G079730.9 , HORVU6Hr1G079730.10 , HORVU6Hr1G079730.11 , HORVU6Hr1G079730.12 , HORVU6Hr1G079730.13 , HORVU6Hr1G079730.14 , HORVU6Hr1G079730.15 , HORVU6Hr1G079730.16 , HORVU6Hr1G079730.17 , HORVU6Hr1G079730.18 , HORVU6Hr1G079730.19 , HORVU6Hr1G079730.43 , HORVU6Hr1G079730.41 , HORVU6Hr1G079730.40
Wheat -
Populus -


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Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.004G321400 BRUSHY 1, putative, expressed -
2 Sobic.005G110535 - K02540: DNA replication licensing factor MCM2
3 Sobic.004G156200 POLE1 - Putative DNA polymerase epsilon catalytic subunit, expressed K02324: DNA polymerase epsilon subunit 1
4 Sobic.002G290000 helicase, putative, expressed K15362: BRIP1, BACH1, fanconi anemia group J protein
5 Sobic.005G068800 TOPBP1A - Similar to DNA replication protein TOPBP1 from, expressed K10728: topoisomerase (DNA) II binding protein 1
6 Sobic.002G113400 dnaJ domain containing protein, expressed -
7 Sobic.003G118100 EMB3013, putative, expressed K17545: serine/threonine-protein kinase ULK4
8 Sobic.009G087000 MCM6 - Putative minichromosome maintenance MCM complex subunit 6, expressed K02542: DNA replication licensing factor MCM6
9 Sobic.003G315700 AAA-type ATPase family protein, putative, expressed -
10 Sobic.003G183700 MCM4 - Putative minichromosome maintenance MCM complex subunit 4, expressed K02212: MCM4, DNA replication licensing factor MCM4
11 Sobic.001G507000 expressed protein -
12 Sobic.001G025900 expressed protein -
13 Sobic.001G109700 expressed protein K19001: HELLS, ATP-dependent DNA helicase
14 Sobic.004G306100 expressed protein -
15 Sobic.003G013800 expressed protein -
16 Sobic.006G127200 kelch repeat protein, putative, expressed -
17 Sobic.002G271400 RNA recognition motif containing protein, putative, expressed -
18 Sobic.006G120600 AAA-type ATPase family protein, putative, expressed -
19 Sobic.003G369200 POLA1 - Putative DNA polymerase alpha catalytic subunit, expressed K02320: DNA polymerase alpha subunit A
20 Sobic.001G377700 expressed protein K10895: fanconi anemia group I protein


Gene co-expression network
sample Sobic004G095200 Sobic004G095200 Sobic004G321400 Sobic004G321400 Sobic004G095200--Sobic004G321400 Sobic005G110535 Sobic005G110535 Sobic004G095200--Sobic005G110535 Sobic004G156200 Sobic004G156200 Sobic004G095200--Sobic004G156200 Sobic002G290000 Sobic002G290000 Sobic004G095200--Sobic002G290000 Sobic005G068800 Sobic005G068800 Sobic004G095200--Sobic005G068800 Sobic002G113400 Sobic002G113400 Sobic004G095200--Sobic002G113400 Sobic003G118100 Sobic003G118100 Sobic004G095200--Sobic003G118100 Sobic009G087000 Sobic009G087000 Sobic004G095200--Sobic009G087000 Sobic003G315700 Sobic003G315700 Sobic004G095200--Sobic003G315700 Sobic003G183700 Sobic003G183700 Sobic004G321400--Sobic003G183700 Sobic004G321400--Sobic009G087000 Sobic004G321400--Sobic005G110535 Sobic004G321400--Sobic002G290000 Sobic003G369200 Sobic003G369200 Sobic004G321400--Sobic003G369200 Sobic008G129200 Sobic008G129200 Sobic004G321400--Sobic008G129200 Sobic004G321400--Sobic004G095200 Sobic009G172950 Sobic009G172950 Sobic004G321400--Sobic009G172950 Sobic004G331600 Sobic004G331600 Sobic004G321400--Sobic004G331600 Sobic005G110535--Sobic002G290000 Sobic005G110535--Sobic009G087000 Sobic010G147700 Sobic010G147700 Sobic005G110535--Sobic010G147700 Sobic005G110535--Sobic008G129200 Sobic005G110535--Sobic003G183700 Sobic005G110535--Sobic003G369200 Sobic005G110535--Sobic004G321400 Sobic003G179500 Sobic003G179500 Sobic005G110535--Sobic003G179500 Sobic001G377700 Sobic001G377700 Sobic005G110535--Sobic001G377700 Sobic004G156200--Sobic005G110535 Sobic004G156200--Sobic005G068800 Sobic003G423600 Sobic003G423600 Sobic004G156200--Sobic003G423600 Sobic004G156200--Sobic002G290000 Sobic004G156200--Sobic009G087000 Sobic006G281400 Sobic006G281400 Sobic004G156200--Sobic006G281400 Sobic004G156200--Sobic003G369200 Sobic009G146250 Sobic009G146250 Sobic004G156200--Sobic009G146250 Sobic009G052100 Sobic009G052100 Sobic004G156200--Sobic009G052100 Sobic002G290000--Sobic005G110535 Sobic002G290000--Sobic001G377700 Sobic007G125300 Sobic007G125300 Sobic002G290000--Sobic007G125300 Sobic002G290000--Sobic009G087000 Sobic002G290000--Sobic010G147700 Sobic001G013400 Sobic001G013400 Sobic002G290000--Sobic001G013400 Sobic002G290000--Sobic002G113400 Sobic002G290000--Sobic008G129200 Sobic004G053900 Sobic004G053900 Sobic002G290000--Sobic004G053900 Sobic001G507000 Sobic001G507000 Sobic005G068800--Sobic001G507000 Sobic005G068800--Sobic004G156200 Sobic005G068800--Sobic004G095200 Sobic006G120600 Sobic006G120600 Sobic005G068800--Sobic006G120600 Sobic005G068800--Sobic009G146250 Sobic006G195500 Sobic006G195500 Sobic005G068800--Sobic006G195500 Sobic005G068800--Sobic003G183700 Sobic002G021200 Sobic002G021200 Sobic005G068800--Sobic002G021200 Sobic005G068800--Sobic009G052100 Sobic002G113400--Sobic004G053900 Sobic001G025900 Sobic001G025900 Sobic002G113400--Sobic001G025900 Sobic002G297500 Sobic002G297500 Sobic002G113400--Sobic002G297500 Sobic002G113400--Sobic002G290000 Sobic002G113400--Sobic001G013400 Sobic008G148000 Sobic008G148000 Sobic002G113400--Sobic008G148000 Sobic002G113400--Sobic005G110535 Sobic002G113400--Sobic007G125300 Sobic010G051100 Sobic010G051100 Sobic002G113400--Sobic010G051100 Sobic006G035600 Sobic006G035600 Sobic003G118100--Sobic006G035600 Sobic002G191000 Sobic002G191000 Sobic003G118100--Sobic002G191000 Sobic010G008900 Sobic010G008900 Sobic003G118100--Sobic010G008900 Sobic003G118100--Sobic008G148000 Sobic005G000500 Sobic005G000500 Sobic003G118100--Sobic005G000500 Sobic003G118100--Sobic007G125300 Sobic001G131300 Sobic001G131300 Sobic003G118100--Sobic001G131300 Sobic003G294500 Sobic003G294500 Sobic003G118100--Sobic003G294500 Sobic001G029800 Sobic001G029800 Sobic003G118100--Sobic001G029800 Sobic009G087000--Sobic010G147700 Sobic009G087000--Sobic003G183700 Sobic009G087000--Sobic005G110535 Sobic009G087000--Sobic008G129200 Sobic006G029300 Sobic006G029300 Sobic009G087000--Sobic006G029300 Sobic009G087000--Sobic003G369200 Sobic009G087000--Sobic004G321400 Sobic009G087000--Sobic004G331600 Sobic009G087000--Sobic003G179500 Sobic003G315700--Sobic008G148000 Sobic006G193100 Sobic006G193100 Sobic003G315700--Sobic006G193100 Sobic004G306100 Sobic004G306100 Sobic003G315700--Sobic004G306100 Sobic003G315700--Sobic002G290000 Sobic009G202801 Sobic009G202801 Sobic003G315700--Sobic009G202801 Sobic004G328300 Sobic004G328300 Sobic003G315700--Sobic004G328300 Sobic003G409600 Sobic003G409600 Sobic003G315700--Sobic003G409600 Sobic003G315700--Sobic002G113400 Sobic003G315700--Sobic009G052100
Octagon: transcription factors


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