Gene annotation
Transcriptome id Sobic.003G279100.2,Sobic.003G279100.1
Synonym Sb03g033080
Functional annotation mitochondrial ATP synthase g subunit family protein, putative, expressed
UniProt C5XIC8
Pfam PF00533 PF04718
Panther DB PTHR12386 PTHR12386:SF15
NCBI CDD -
KEGG Orthology K02140; ATPeFG, ATP5L, F-type H+-transporting ATPase subunit g
Gene Ontology GO:0015986; ATP synthesis coupled proton transport GO:0015078proton transmembrane transporter activity GO:0000276mitochondrial proton-transporting ATP synthase complex, coupling factor F(o)


Orthologs (automatic annotation)
TAIR AT4G29480 : Mitochondrial ATP synthase subunit G protein
RAP-DB (Rice) LOC_Os05g45740.2 : mitochondrial ATP synthase g subunit family protein, putative, expressed
MaizeGDB (Corn) Zm00025a027761 , Zm00025a038450
Brachypodium PNT70832
Barley HORVU1Hr1G080890.1 , HORVU3Hr1G068400.2 , HORVU3Hr1G068400.1 , HORVU3Hr1G068350.1
Wheat TraesCS1A02G352800 , TraesCS1B02G369000 , TraesCS3A02G287700 , TraesCS3D02G287500 , TraesCS1D02G357200
Populus -


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Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.004G217450 - -
2 Sobic.006G149200 LSM domain containing protein, expressed K11096: SNRPD2, small nuclear ribonucleoprotein D2
3 Sobic.004G285900 HMG1/2, putative, expressed -
4 Sobic.001G300400 expansin precursor, putative, expressed -
5 Sobic.010G222100 MBTB10 - Bric-a-Brac, Tramtrack, Broad Complex BTB domain with Meprin and TRAF Homology MATH domain, expressed K10523: speckle-type POZ protein
6 Sobic.006G081800 histone H3, putative, expressed K11253: histone H3
7 Sobic.010G215800 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@expressed protein -
8 Sobic.001G505000 cyclin-dependent kinases regulatory subunit 1, putative, expressed K02219: cyclin-dependent kinase regulatory subunit CKS1
9 Sobic.001G261549 - -
10 Sobic.003G379600 methyltransferase, putative, expressed -
11 Sobic.005G129700 SAG (Senescence-associated gene): up-regulated gene during salt-induced senescence.(PubMedID : 27586543)@sex determination protein tasselseed-2, putative, expressed -
12 Sobic.006G260300 SAG (Senescence-associated gene): up-regulated gene during dark-induced senescence.(PubMedID : 27586543)@oryzain beta chain precursor, putative, expressed -
13 Sobic.003G174700 expressed protein -
14 Sobic.002G385400 ORC6 - Putative origin recognition complex subunit 6, expressed K02608: origin recognition complex subunit 6
15 Sobic.001G399300 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@protein phosphotase protein, putative, expressed -
16 Sobic.009G033800 IF, putative, expressed -
17 Sobic.002G289800 HMG1/2, putative, expressed -
18 Sobic.002G039100 "SAG (Senescence-associated gene): differentially expressed gene during developmental, salt-induced, and dark-induced senescence."(PubMedID : 27586543)@glutaredoxin, putative, expressed K17479: glutaredoxin domain-containing cysteine-rich protein 1
19 Sobic.010G101100 E2F family transcription factor protein, putative, expressed -
20 Sobic.002G351100 DNA repair protein Rad51, putative, expressed K04482: DNA repair protein RAD51


Gene co-expression network
sample Sobic003G279100 Sobic003G279100 Sobic004G217450 Sobic004G217450 Sobic003G279100--Sobic004G217450 Sobic006G149200 Sobic006G149200 Sobic003G279100--Sobic006G149200 Sobic004G285900 Sobic004G285900 Sobic003G279100--Sobic004G285900 Sobic001G300400 Sobic001G300400 Sobic003G279100--Sobic001G300400 Sobic010G222100 Sobic010G222100 Sobic003G279100--Sobic010G222100 Sobic006G081800 Sobic006G081800 Sobic003G279100--Sobic006G081800 Sobic010G215800 Sobic010G215800 Sobic003G279100--Sobic010G215800 Sobic001G505000 Sobic001G505000 Sobic003G279100--Sobic001G505000 Sobic001G261549 Sobic001G261549 Sobic003G279100--Sobic001G261549 Sobic002G385400 Sobic002G385400 Sobic004G217450--Sobic002G385400 Sobic003G034600 Sobic003G034600 Sobic004G217450--Sobic003G034600 Sobic004G217450--Sobic003G279100 Sobic004G217450--Sobic006G149200 Sobic004G274900 Sobic004G274900 Sobic004G217450--Sobic004G274900 Sobic007G198000 Sobic007G198000 Sobic004G217450--Sobic007G198000 Sobic003G174700 Sobic003G174700 Sobic004G217450--Sobic003G174700 Sobic008G025600 Sobic008G025600 Sobic004G217450--Sobic008G025600 Sobic006G115000 Sobic006G115000 Sobic004G217450--Sobic006G115000 Sobic006G149200--Sobic006G115000 Sobic002G286900 Sobic002G286900 Sobic006G149200--Sobic002G286900 Sobic003G018600 Sobic003G018600 Sobic006G149200--Sobic003G018600 Sobic003G073900 Sobic003G073900 Sobic006G149200--Sobic003G073900 Sobic006G149200--Sobic004G217450 Sobic003G150000 Sobic003G150000 Sobic006G149200--Sobic003G150000 Sobic006G231700 Sobic006G231700 Sobic006G149200--Sobic006G231700 Sobic005G110800 Sobic005G110800 Sobic006G149200--Sobic005G110800 Sobic006G159600 Sobic006G159600 Sobic006G149200--Sobic006G159600 Sobic001G078600 Sobic001G078600 Sobic004G285900--Sobic001G078600 Sobic004G285900--Sobic001G261549 Sobic004G279601 Sobic004G279601 Sobic004G285900--Sobic004G279601 Sobic007G214700 Sobic007G214700 Sobic004G285900--Sobic007G214700 Sobic006G102900 Sobic006G102900 Sobic004G285900--Sobic006G102900 Sobic002G162300 Sobic002G162300 Sobic004G285900--Sobic002G162300 Sobic007G154500 Sobic007G154500 Sobic004G285900--Sobic007G154500 Sobic009G189200 Sobic009G189200 Sobic004G285900--Sobic009G189200 Sobic001G205000 Sobic001G205000 Sobic004G285900--Sobic001G205000 Sobic002G351100 Sobic002G351100 Sobic001G300400--Sobic002G351100 Sobic001G289900 Sobic001G289900 Sobic001G300400--Sobic001G289900 Sobic006G236800 Sobic006G236800 Sobic001G300400--Sobic006G236800 Sobic003G297200 Sobic003G297200 Sobic001G300400--Sobic003G297200 Sobic004G047100 Sobic004G047100 Sobic001G300400--Sobic004G047100 Sobic002G289800 Sobic002G289800 Sobic001G300400--Sobic002G289800 Sobic002G426800 Sobic002G426800 Sobic001G300400--Sobic002G426800 Sobic003G102000 Sobic003G102000 Sobic001G300400--Sobic003G102000 Sobic001G091500 Sobic001G091500 Sobic001G300400--Sobic001G091500 Sobic010G222100--Sobic002G289800 Sobic009G033800 Sobic009G033800 Sobic010G222100--Sobic009G033800 Sobic002G353200 Sobic002G353200 Sobic010G222100--Sobic002G353200 Sobic010G222100--Sobic010G215800 Sobic010G222100--Sobic001G289900 Sobic010G222100--Sobic001G505000 Sobic005G129700 Sobic005G129700 Sobic010G222100--Sobic005G129700 Sobic007G132900 Sobic007G132900 Sobic010G222100--Sobic007G132900 Sobic010G222100--Sobic003G279100 Sobic006G134900 Sobic006G134900 Sobic006G081800--Sobic006G134900 Sobic004G229200 Sobic004G229200 Sobic006G081800--Sobic004G229200 Sobic001G169800 Sobic001G169800 Sobic006G081800--Sobic001G169800 Sobic001G105800 Sobic001G105800 Sobic006G081800--Sobic001G105800 Sobic007G017700 Sobic007G017700 Sobic006G081800--Sobic007G017700 Sobic006G081800--Sobic002G289800 Sobic001G238900 Sobic001G238900 Sobic006G081800--Sobic001G238900 Sobic002G246900 Sobic002G246900 Sobic006G081800--Sobic002G246900 Sobic006G081800--Sobic004G279601 Sobic010G215800--Sobic010G222100 Sobic010G215800--Sobic002G289800 Sobic010G239400 Sobic010G239400 Sobic010G215800--Sobic010G239400 Sobic001G439100 Sobic001G439100 Sobic010G215800--Sobic001G439100 Sobic002G039100 Sobic002G039100 Sobic010G215800--Sobic002G039100 Sobic010G215800--Sobic003G279100 Sobic010G215800--Sobic005G129700 Sobic010G215800--Sobic009G033800 Sobic010G215800--Sobic001G505000 Sobic009G165500 Sobic009G165500 Sobic001G505000--Sobic009G165500 Sobic001G107300 Sobic001G107300 Sobic001G505000--Sobic001G107300 Sobic001G505000--Sobic006G149200 Sobic001G505000--Sobic002G289800 Sobic001G505000--Sobic010G222100 Sobic001G505000--Sobic006G115000 Sobic006G013900 Sobic006G013900 Sobic001G505000--Sobic006G013900 Sobic001G429000 Sobic001G429000 Sobic001G505000--Sobic001G429000 Sobic001G505000--Sobic003G174700 Sobic001G261549--Sobic006G102900 Sobic001G261549--Sobic004G285900 Sobic001G261549--Sobic009G189200 Sobic006G191700 Sobic006G191700 Sobic001G261549--Sobic006G191700 Sobic009G194900 Sobic009G194900 Sobic001G261549--Sobic009G194900 Sobic003G107200 Sobic003G107200 Sobic001G261549--Sobic003G107200 Sobic001G261549--Sobic001G078600 Sobic001G261549--Sobic007G154500 Sobic008G096200 Sobic008G096200 Sobic001G261549--Sobic008G096200
Octagon: transcription factors


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