Gene annotation
Transcriptome id Sobic.010G215800.1
Synonym Sb10g026210
Functional annotation SAG (Senescence-associated gene): differentially expressed gene during developmental senescence. (PubMedID : 27586543)
expressed protein
UniProt C5Z791
Pfam -
Panther DB PTHR33181 PTHR33181:SF9
NCBI CDD -
KEGG Orthology -
Gene Ontology -


Orthologs (automatic annotation)
TAIR AT5G43150 : -
RAP-DB (Rice) LOC_Os06g44870.1 : expressed protein
MaizeGDB (Corn) -
Brachypodium -
Barley HORVU6Hr1G030550.1 , HORVU7Hr1G076450.1
Wheat TraesCS6B02G180600 , TraesCS7D02G316500 , TraesCS7A02G319900 , TraesCS6D02G142300 , TraesCS7B02G220900 , TraesCS6A02G152500
Populus -


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cDNA sequences
Sobic.010G215800


Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.010G222100 MBTB10 - Bric-a-Brac, Tramtrack, Broad Complex BTB domain with Meprin and TRAF Homology MATH domain, expressed K10523: speckle-type POZ protein
2 Sobic.002G289800 HMG1/2, putative, expressed -
3 Sobic.010G239400 oryzain beta chain precursor, putative, expressed -
4 Sobic.001G439100 thaumatin-like protein 1 precursor, putative, expressed -
5 Sobic.002G039100 "SAG (Senescence-associated gene): differentially expressed gene during developmental, salt-induced, and dark-induced senescence."(PubMedID : 27586543)@glutaredoxin, putative, expressed K17479: glutaredoxin domain-containing cysteine-rich protein 1
6 Sobic.003G279100 mitochondrial ATP synthase g subunit family protein, putative, expressed K02140: ATPeFG, ATP5L, F-type H+-transporting ATPase subunit g
7 Sobic.005G129700 SAG (Senescence-associated gene): up-regulated gene during salt-induced senescence.(PubMedID : 27586543)@sex determination protein tasselseed-2, putative, expressed -
8 Sobic.009G033800 IF, putative, expressed -
9 Sobic.001G505000 cyclin-dependent kinases regulatory subunit 1, putative, expressed K02219: cyclin-dependent kinase regulatory subunit CKS1
10 Sobic.002G255600 glucan endo-1,3-beta-glucosidase precursor, putative, expressed -
11 Sobic.009G157600 DUF740 domain containing protein, expressed -
12 Sobic.001G289900 AT hook motif domain containing protein, expressed -
13 Sobic.006G260300 SAG (Senescence-associated gene): up-regulated gene during dark-induced senescence.(PubMedID : 27586543)@oryzain beta chain precursor, putative, expressed -
14 Sobic.001G300400 expansin precursor, putative, expressed -
15 Sobic.001G429000 harpin-induced protein 1 domain containing protein, expressed -
16 Sobic.002G351100 DNA repair protein Rad51, putative, expressed K04482: DNA repair protein RAD51
17 Sobic.003G174700 expressed protein -
18 Sobic.004G070900 myb-like DNA-binding domain containing protein, putative, expressed K09422: transcription factor MYB, plant
19 Sobic.001G138800 GCRP4 - Glycine and cysteine rich family protein precursor, expressed -
20 Sobic.010G163732 - -


Gene co-expression network
sample Sobic010G215800 Sobic010G215800 Sobic010G222100 Sobic010G222100 Sobic010G215800--Sobic010G222100 Sobic002G289800 Sobic002G289800 Sobic010G215800--Sobic002G289800 Sobic010G239400 Sobic010G239400 Sobic010G215800--Sobic010G239400 Sobic001G439100 Sobic001G439100 Sobic010G215800--Sobic001G439100 Sobic002G039100 Sobic002G039100 Sobic010G215800--Sobic002G039100 Sobic003G279100 Sobic003G279100 Sobic010G215800--Sobic003G279100 Sobic005G129700 Sobic005G129700 Sobic010G215800--Sobic005G129700 Sobic009G033800 Sobic009G033800 Sobic010G215800--Sobic009G033800 Sobic001G505000 Sobic001G505000 Sobic010G215800--Sobic001G505000 Sobic010G222100--Sobic002G289800 Sobic010G222100--Sobic009G033800 Sobic002G353200 Sobic002G353200 Sobic010G222100--Sobic002G353200 Sobic010G222100--Sobic010G215800 Sobic001G289900 Sobic001G289900 Sobic010G222100--Sobic001G289900 Sobic010G222100--Sobic001G505000 Sobic010G222100--Sobic005G129700 Sobic007G132900 Sobic007G132900 Sobic010G222100--Sobic007G132900 Sobic010G222100--Sobic003G279100 Sobic002G289800--Sobic001G289900 Sobic007G017700 Sobic007G017700 Sobic002G289800--Sobic007G017700 Sobic003G316601 Sobic003G316601 Sobic002G289800--Sobic003G316601 Sobic004G237000 Sobic004G237000 Sobic002G289800--Sobic004G237000 Sobic004G327600 Sobic004G327600 Sobic002G289800--Sobic004G327600 Sobic002G289800--Sobic007G132900 Sobic002G289800--Sobic010G222100 Sobic001G300400 Sobic001G300400 Sobic002G289800--Sobic001G300400 Sobic006G081800 Sobic006G081800 Sobic002G289800--Sobic006G081800 Sobic010G154300 Sobic010G154300 Sobic010G239400--Sobic010G154300 Sobic010G239400--Sobic010G215800 Sobic002G095400 Sobic002G095400 Sobic010G239400--Sobic002G095400 Sobic004G086500 Sobic004G086500 Sobic010G239400--Sobic004G086500 Sobic005G122850 Sobic005G122850 Sobic010G239400--Sobic005G122850 Sobic006G156200 Sobic006G156200 Sobic010G239400--Sobic006G156200 Sobic002G343600 Sobic002G343600 Sobic010G239400--Sobic002G343600 Sobic006G239600 Sobic006G239600 Sobic010G239400--Sobic006G239600 Sobic010G048500 Sobic010G048500 Sobic010G239400--Sobic010G048500 Sobic003G174700 Sobic003G174700 Sobic001G439100--Sobic003G174700 Sobic001G439100--Sobic010G215800 Sobic001G439100--Sobic010G222100 Sobic002G247800 Sobic002G247800 Sobic001G439100--Sobic002G247800 Sobic001G439100--Sobic003G279100 Sobic010G163732 Sobic010G163732 Sobic001G439100--Sobic010G163732 Sobic004G217450 Sobic004G217450 Sobic001G439100--Sobic004G217450 Sobic001G439100--Sobic002G039100 Sobic003G379600 Sobic003G379600 Sobic001G439100--Sobic003G379600 Sobic002G039100--Sobic010G215800 Sobic002G039100--Sobic001G505000 Sobic006G013900 Sobic006G013900 Sobic002G039100--Sobic006G013900 Sobic009G165500 Sobic009G165500 Sobic002G039100--Sobic009G165500 Sobic002G039100--Sobic010G222100 Sobic002G039100--Sobic003G279100 Sobic006G149200 Sobic006G149200 Sobic002G039100--Sobic006G149200 Sobic003G383100 Sobic003G383100 Sobic002G039100--Sobic003G383100 Sobic001G399300 Sobic001G399300 Sobic002G039100--Sobic001G399300 Sobic003G279100--Sobic004G217450 Sobic003G279100--Sobic006G149200 Sobic004G285900 Sobic004G285900 Sobic003G279100--Sobic004G285900 Sobic003G279100--Sobic001G300400 Sobic003G279100--Sobic010G222100 Sobic003G279100--Sobic006G081800 Sobic003G279100--Sobic010G215800 Sobic003G279100--Sobic001G505000 Sobic001G261549 Sobic001G261549 Sobic003G279100--Sobic001G261549 Sobic005G129700--Sobic009G033800 Sobic001G255600 Sobic001G255600 Sobic005G129700--Sobic001G255600 Sobic010G227200 Sobic010G227200 Sobic005G129700--Sobic010G227200 Sobic005G129700--Sobic001G289900 Sobic006G102900 Sobic006G102900 Sobic005G129700--Sobic006G102900 Sobic005G129700--Sobic010G222100 Sobic010G191000 Sobic010G191000 Sobic005G129700--Sobic010G191000 Sobic001G133300 Sobic001G133300 Sobic005G129700--Sobic001G133300 Sobic004G331200 Sobic004G331200 Sobic005G129700--Sobic004G331200 Sobic009G033800--Sobic005G129700 Sobic009G033800--Sobic010G222100 Sobic009G033800--Sobic001G289900 Sobic007G154500 Sobic007G154500 Sobic009G033800--Sobic007G154500 Sobic009G033800--Sobic006G102900 Sobic009G033800--Sobic004G331200 Sobic009G033800--Sobic002G289800 Sobic003G107200 Sobic003G107200 Sobic009G033800--Sobic003G107200 Sobic002G426800 Sobic002G426800 Sobic009G033800--Sobic002G426800 Sobic001G505000--Sobic009G165500 Sobic001G107300 Sobic001G107300 Sobic001G505000--Sobic001G107300 Sobic001G505000--Sobic006G149200 Sobic001G505000--Sobic002G289800 Sobic001G505000--Sobic010G222100 Sobic006G115000 Sobic006G115000 Sobic001G505000--Sobic006G115000 Sobic001G505000--Sobic006G013900 Sobic001G429000 Sobic001G429000 Sobic001G505000--Sobic001G429000 Sobic001G505000--Sobic003G174700
Octagon: transcription factors


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