Gene annotation
Transcriptome id Sobic.001G138800.1
Synonym Sb01g012110
Functional annotation GCRP4 - Glycine and cysteine rich family protein precursor, expressed
UniProt C5WPP4
Pfam -
Panther DB PTHR34789 PTHR34789:SF1
NCBI CDD -
KEGG Orthology -
Gene Ontology -


Orthologs (automatic annotation)
TAIR AT4G21620 : glycine-rich protein
RAP-DB (Rice) LOC_Os03g47270.1 : GCRP4 - Glycine and cysteine rich family protein precursor, expressed
MaizeGDB (Corn) Zm00025a017120
Brachypodium -
Barley -
Wheat -
Populus -


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cDNA sequences
Sobic.001G138800


Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.004G237000 down-regulated TF in developmental senescence(PubMedID : 27586543)@"PGL2(Ortholog in rice:Heang and Sassa, 2012b(PubMedID : 31659886)@helix-loop-helix DNA-binding domain containing protein, expressed -
2 Sobic.007G033700 OsFBX309 - F-box domain containing protein, expressed -
3 Sobic.003G316601 - -
4 Sobic.002G426000 - -
5 Sobic.003G046400 transcriptional corepressor LEUNIG, putative, expressed -
6 Sobic.007G147200 OsSub56 - Putative Subtilisin homologue, expressed -
7 Sobic.010G070900 keratin, type I cytoskeletal 9, putative, expressed -
8 Sobic.003G238800 GDSL-like lipase/acylhydrolase, putative, expressed -
9 Sobic.010G169200 homeobox domain containing protein, expressed -
10 Sobic.001G106500 Homologous to EPF/EPFL genes in Arabidopsis. Modelling of protein structure.(PubMedID : 23755192)@expressed protein -
11 Sobic.001G455900 "qGL3-2/qLGY3(Ortholog in rice:Yu et al., 2018/Liu et al., 2018)"(PubMedID : 31659846)@determinacy of the spikelet meristem and determining the identity of lemmas and paleas(PubMedID : 15208396)@OsMADS1 - MADS-box family gene with MIKCc type-box, expressed -
12 Sobic.007G121200 YDG/SRA domain containing protein, expressed -
13 Sobic.002G268300 3-ketoacyl-CoA synthase precursor, putative, expressed -
14 Sobic.009G243000 OsFBL2 - F-box domain and LRR containing protein, expressed -
15 Sobic.001G456000 YABBY domain containing protein, putative, expressed -
16 Sobic.006G163300 aldehyde dehydrogenase, putative, expressed K00128: aldehyde dehydrogenase (NAD+)
17 Sobic.008G088800 expressed protein -
18 Sobic.001G463301 - -
19 Sobic.003G342900 SAG (Senescence-associated gene): up-regulated gene during salt-induced senescence.(PubMedID : 27586543)@glutaredoxin, putative, expressed K17479: glutaredoxin domain-containing cysteine-rich protein 1
20 Sobic.010G220800 zinc-binding protein, putative, expressed -


Gene co-expression network
sample Sobic001G138800 Sobic001G138800 Sobic004G237000 Sobic004G237000 Sobic001G138800--Sobic004G237000 Sobic007G033700 Sobic007G033700 Sobic001G138800--Sobic007G033700 Sobic003G316601 Sobic003G316601 Sobic001G138800--Sobic003G316601 Sobic002G426000 Sobic002G426000 Sobic001G138800--Sobic002G426000 Sobic003G046400 Sobic003G046400 Sobic001G138800--Sobic003G046400 Sobic007G147200 Sobic007G147200 Sobic001G138800--Sobic007G147200 Sobic010G070900 Sobic010G070900 Sobic001G138800--Sobic010G070900 Sobic003G238800 Sobic003G238800 Sobic001G138800--Sobic003G238800 Sobic010G169200 Sobic010G169200 Sobic001G138800--Sobic010G169200 Sobic004G237000--Sobic003G316601 Sobic003G085900 Sobic003G085900 Sobic004G237000--Sobic003G085900 Sobic004G237000--Sobic007G033700 Sobic004G237000--Sobic003G046400 Sobic004G237000--Sobic010G070900 Sobic004G237000--Sobic002G426000 Sobic004G237000--Sobic007G147200 Sobic009G243000 Sobic009G243000 Sobic004G237000--Sobic009G243000 Sobic001G106500 Sobic001G106500 Sobic004G237000--Sobic001G106500 Sobic007G033700--Sobic003G046400 Sobic007G033700--Sobic009G243000 Sobic001G137600 Sobic001G137600 Sobic007G033700--Sobic001G137600 Sobic001G455900 Sobic001G455900 Sobic007G033700--Sobic001G455900 Sobic006G163300 Sobic006G163300 Sobic007G033700--Sobic006G163300 Sobic007G033700--Sobic010G070900 Sobic006G271600 Sobic006G271600 Sobic007G033700--Sobic006G271600 Sobic001G071600 Sobic001G071600 Sobic007G033700--Sobic001G071600 Sobic007G033700--Sobic004G237000 Sobic003G316601--Sobic004G237000 Sobic003G316601--Sobic007G147200 Sobic003G316601--Sobic001G106500 Sobic003G316601--Sobic003G085900 Sobic003G316601--Sobic003G046400 Sobic003G316601--Sobic010G070900 Sobic006G107500 Sobic006G107500 Sobic003G316601--Sobic006G107500 Sobic003G092300 Sobic003G092300 Sobic003G316601--Sobic003G092300 Sobic010G255000 Sobic010G255000 Sobic003G316601--Sobic010G255000 Sobic002G268300 Sobic002G268300 Sobic002G426000--Sobic002G268300 Sobic004G000800 Sobic004G000800 Sobic002G426000--Sobic004G000800 Sobic002G426000--Sobic010G070900 Sobic010G220800 Sobic010G220800 Sobic002G426000--Sobic010G220800 Sobic010G168700 Sobic010G168700 Sobic002G426000--Sobic010G168700 Sobic007G121200 Sobic007G121200 Sobic002G426000--Sobic007G121200 Sobic002G426000--Sobic003G046400 Sobic002G426000--Sobic004G237000 Sobic002G426000--Sobic007G033700 Sobic003G046400--Sobic001G455900 Sobic003G046400--Sobic001G071600 Sobic003G046400--Sobic007G033700 Sobic003G046400--Sobic001G106500 Sobic003G046400--Sobic006G271600 Sobic010G183800 Sobic010G183800 Sobic003G046400--Sobic010G183800 Sobic003G046400--Sobic006G163300 Sobic003G046400--Sobic010G070900 Sobic009G048300 Sobic009G048300 Sobic003G046400--Sobic009G048300 Sobic007G147200--Sobic010G070900 Sobic007G147200--Sobic010G255000 Sobic004G003700 Sobic004G003700 Sobic007G147200--Sobic004G003700 Sobic007G147200--Sobic003G046400 Sobic007G147200--Sobic006G163300 Sobic001G143400 Sobic001G143400 Sobic007G147200--Sobic001G143400 Sobic003G019900 Sobic003G019900 Sobic007G147200--Sobic003G019900 Sobic007G147200--Sobic006G107500 Sobic001G101700 Sobic001G101700 Sobic007G147200--Sobic001G101700 Sobic010G070900--Sobic007G147200 Sobic002G360600 Sobic002G360600 Sobic010G070900--Sobic002G360600 Sobic010G070900--Sobic003G046400 Sobic010G070900--Sobic006G163300 Sobic010G070900--Sobic006G107500 Sobic010G070900--Sobic002G426000 Sobic010G070900--Sobic007G033700 Sobic010G070900--Sobic010G168700 Sobic010G070900--Sobic001G143400 Sobic003G238800--Sobic002G268300 Sobic002G344201 Sobic002G344201 Sobic003G238800--Sobic002G344201 Sobic003G231000 Sobic003G231000 Sobic003G238800--Sobic003G231000 Sobic004G350500 Sobic004G350500 Sobic003G238800--Sobic004G350500 Sobic004G254300 Sobic004G254300 Sobic003G238800--Sobic004G254300 Sobic001G313800 Sobic001G313800 Sobic003G238800--Sobic001G313800 Sobic003G238800--Sobic010G169200 Sobic001G456000 Sobic001G456000 Sobic003G238800--Sobic001G456000 Sobic003G238800--Sobic010G220800 Sobic007G218400 Sobic007G218400 Sobic010G169200--Sobic007G218400 Sobic010G169200--Sobic010G220800 Sobic009G059800 Sobic009G059800 Sobic010G169200--Sobic009G059800 Sobic010G169200--Sobic004G254300 Sobic009G059932 Sobic009G059932 Sobic010G169200--Sobic009G059932 Sobic010G237400 Sobic010G237400 Sobic010G169200--Sobic010G237400 Sobic009G059866 Sobic009G059866 Sobic010G169200--Sobic009G059866 Sobic002G102800 Sobic002G102800 Sobic010G169200--Sobic002G102800 Sobic004G056500 Sobic004G056500 Sobic010G169200--Sobic004G056500
Octagon: transcription factors


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