Gene annotation
Transcriptome id Sobic.003G342900.1
Synonym Sb03g038700
Functional annotation SAG (Senescence-associated gene): up-regulated gene during salt-induced senescence. (PubMedID : 27586543)
glutaredoxin, putative, expressed
UniProt A0A1B6Q6V2
Pfam PF00462
Panther DB PTHR10168 PTHR10168:SF75
NCBI CDD -
KEGG Orthology K17479; glutaredoxin domain-containing cysteine-rich protein 1
Gene Ontology GO:0015035; protein disulfide oxidoreductase activity GO:0009055electron transfer activity


Orthologs (automatic annotation)
TAIR AT5G58530 : Glutaredoxin family protein
RAP-DB (Rice) LOC_Os01g61350.1 : glutaredoxin, putative, expressed
MaizeGDB (Corn) Zm00025a043958 , Zm00025a027007 , Zm00025a039737 , Zm00025a037771
Brachypodium KQK10403
Barley HORVU3Hr1G087930.1 , HORVU7Hr1G076170.1 , HORVU7Hr1G076170.2
Wheat TraesCS3D02G343100
Populus -


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Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.003G316601 - -
2 Sobic.007G147200 OsSub56 - Putative Subtilisin homologue, expressed -
3 Sobic.010G014500 aspartic protease, putative, expressed -
4 Sobic.001G138800 GCRP4 - Glycine and cysteine rich family protein precursor, expressed -
5 Sobic.009G087700 proline-rich family protein, putative, expressed -
6 Sobic.004G237000 down-regulated TF in developmental senescence(PubMedID : 27586543)@"PGL2(Ortholog in rice:Heang and Sassa, 2012b(PubMedID : 31659886)@helix-loop-helix DNA-binding domain containing protein, expressed -
7 Sobic.007G132900 linker histone H1 and H5 family protein, expressed -
8 Sobic.006G107500 MYB family transcription factor, putative, expressed K09422: transcription factor MYB, plant
9 Sobic.001G143400 Trihelix Family(PubMedID : 24864043)@transcription factor, putative, expressed -
10 Sobic.010G070900 keratin, type I cytoskeletal 9, putative, expressed -
11 Sobic.005G140001 - K08235: xyloglucan:xyloglucosyl transferase
12 Sobic.010G092400 glycosyl transferase 8 domain containing protein, putative, expressed -
13 Sobic.008G151600 PMR5, putative, expressed -
14 Sobic.004G003700 Trihelix Family(PubMedID : 24864043)@expressed protein -
15 Sobic.002G430700 glycosyltransferase family 43 protein, putative, expressed -
16 Sobic.003G085900 Glycosyl hydrolase. predicted target of sbi-miR-5568 and sbi-miR-6220 expressed in the stems of sweet sorghum(PubMedID : 26117170)@glycosyl hydrolase, family 31, putative, expressed K15925: alpha-D-xyloside xylohydrolase
17 Sobic.001G299600 GATA zinc finger domain containing protein, expressed -
18 Sobic.003G046400 transcriptional corepressor LEUNIG, putative, expressed -
19 Sobic.002G289800 HMG1/2, putative, expressed -
20 Sobic.001G464800 cyclin, putative, expressed K18811: cyclin D5, plant


Gene co-expression network
sample Sobic003G342900 Sobic003G342900 Sobic003G316601 Sobic003G316601 Sobic003G342900--Sobic003G316601 Sobic007G147200 Sobic007G147200 Sobic003G342900--Sobic007G147200 Sobic010G014500 Sobic010G014500 Sobic003G342900--Sobic010G014500 Sobic001G138800 Sobic001G138800 Sobic003G342900--Sobic001G138800 Sobic009G087700 Sobic009G087700 Sobic003G342900--Sobic009G087700 Sobic004G237000 Sobic004G237000 Sobic003G342900--Sobic004G237000 Sobic007G132900 Sobic007G132900 Sobic003G342900--Sobic007G132900 Sobic006G107500 Sobic006G107500 Sobic003G342900--Sobic006G107500 Sobic001G143400 Sobic001G143400 Sobic003G342900--Sobic001G143400 Sobic003G316601--Sobic004G237000 Sobic003G316601--Sobic007G147200 Sobic001G106500 Sobic001G106500 Sobic003G316601--Sobic001G106500 Sobic003G085900 Sobic003G085900 Sobic003G316601--Sobic003G085900 Sobic003G046400 Sobic003G046400 Sobic003G316601--Sobic003G046400 Sobic010G070900 Sobic010G070900 Sobic003G316601--Sobic010G070900 Sobic003G316601--Sobic006G107500 Sobic003G092300 Sobic003G092300 Sobic003G316601--Sobic003G092300 Sobic010G255000 Sobic010G255000 Sobic003G316601--Sobic010G255000 Sobic007G147200--Sobic010G070900 Sobic007G147200--Sobic010G255000 Sobic004G003700 Sobic004G003700 Sobic007G147200--Sobic004G003700 Sobic007G147200--Sobic003G046400 Sobic006G163300 Sobic006G163300 Sobic007G147200--Sobic006G163300 Sobic007G147200--Sobic001G143400 Sobic003G019900 Sobic003G019900 Sobic007G147200--Sobic003G019900 Sobic007G147200--Sobic006G107500 Sobic001G101700 Sobic001G101700 Sobic007G147200--Sobic001G101700 Sobic003G338700 Sobic003G338700 Sobic010G014500--Sobic003G338700 Sobic010G077000 Sobic010G077000 Sobic010G014500--Sobic010G077000 Sobic005G199700 Sobic005G199700 Sobic010G014500--Sobic005G199700 Sobic010G014500--Sobic003G019900 Sobic010G014700 Sobic010G014700 Sobic010G014500--Sobic010G014700 Sobic009G146700 Sobic009G146700 Sobic010G014500--Sobic009G146700 Sobic001G299600 Sobic001G299600 Sobic010G014500--Sobic001G299600 Sobic007G165800 Sobic007G165800 Sobic010G014500--Sobic007G165800 Sobic007G180200 Sobic007G180200 Sobic010G014500--Sobic007G180200 Sobic001G138800--Sobic004G237000 Sobic007G033700 Sobic007G033700 Sobic001G138800--Sobic007G033700 Sobic001G138800--Sobic003G316601 Sobic002G426000 Sobic002G426000 Sobic001G138800--Sobic002G426000 Sobic001G138800--Sobic003G046400 Sobic001G138800--Sobic007G147200 Sobic001G138800--Sobic010G070900 Sobic003G238800 Sobic003G238800 Sobic001G138800--Sobic003G238800 Sobic010G169200 Sobic010G169200 Sobic001G138800--Sobic010G169200 Sobic006G221800 Sobic006G221800 Sobic009G087700--Sobic006G221800 Sobic009G087700--Sobic004G003700 Sobic001G101900 Sobic001G101900 Sobic009G087700--Sobic001G101900 Sobic009G087700--Sobic007G147200 Sobic008G125700 Sobic008G125700 Sobic009G087700--Sobic008G125700 Sobic009G087700--Sobic001G101700 Sobic002G360500 Sobic002G360500 Sobic009G087700--Sobic002G360500 Sobic001G496400 Sobic001G496400 Sobic009G087700--Sobic001G496400 Sobic001G393200 Sobic001G393200 Sobic009G087700--Sobic001G393200 Sobic004G237000--Sobic003G316601 Sobic004G237000--Sobic003G085900 Sobic004G237000--Sobic007G033700 Sobic004G237000--Sobic003G046400 Sobic004G237000--Sobic010G070900 Sobic004G237000--Sobic002G426000 Sobic004G237000--Sobic007G147200 Sobic009G243000 Sobic009G243000 Sobic004G237000--Sobic009G243000 Sobic004G237000--Sobic001G106500 Sobic001G289900 Sobic001G289900 Sobic007G132900--Sobic001G289900 Sobic006G065400 Sobic006G065400 Sobic007G132900--Sobic006G065400 Sobic002G289800 Sobic002G289800 Sobic007G132900--Sobic002G289800 Sobic003G102000 Sobic003G102000 Sobic007G132900--Sobic003G102000 Sobic009G120700 Sobic009G120700 Sobic007G132900--Sobic009G120700 Sobic010G119300 Sobic010G119300 Sobic007G132900--Sobic010G119300 Sobic003G260700 Sobic003G260700 Sobic007G132900--Sobic003G260700 Sobic004G198100 Sobic004G198100 Sobic007G132900--Sobic004G198100 Sobic002G353200 Sobic002G353200 Sobic007G132900--Sobic002G353200 Sobic002G360600 Sobic002G360600 Sobic006G107500--Sobic002G360600 Sobic006G107500--Sobic010G070900 Sobic010G087600 Sobic010G087600 Sobic006G107500--Sobic010G087600 Sobic006G107500--Sobic003G085900 Sobic006G107500--Sobic006G163300 Sobic006G107500--Sobic009G146700 Sobic006G107500--Sobic007G147200 Sobic002G430700 Sobic002G430700 Sobic006G107500--Sobic002G430700 Sobic006G107500--Sobic003G338700 Sobic001G143400--Sobic004G003700 Sobic010G168700 Sobic010G168700 Sobic001G143400--Sobic010G168700 Sobic005G168400 Sobic005G168400 Sobic001G143400--Sobic005G168400 Sobic001G143400--Sobic007G147200 Sobic001G143400--Sobic010G070900 Sobic009G047500 Sobic009G047500 Sobic001G143400--Sobic009G047500 Sobic001G143400--Sobic005G199700 Sobic008G138000 Sobic008G138000 Sobic001G143400--Sobic008G138000 Sobic007G209200 Sobic007G209200 Sobic001G143400--Sobic007G209200
Octagon: transcription factors


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