Gene annotation
Transcriptome id Sobic.001G439100.2,Sobic.001G439100.1
Synonym Sb01g041280
Functional annotation thaumatin-like protein 1 precursor, putative, expressed
UniProt A0A1B6QPE5 , A0A1B6QPF7
Pfam PF00314
Panther DB PTHR31048 PTHR31048:SF3
NCBI CDD -
KEGG Orthology -
Gene Ontology -


Orthologs (automatic annotation)
TAIR AT4G38670 : Pathogenesis-related thaumatin superfamily protein
RAP-DB (Rice) LOC_Os03g14050.1 : thaumatin-like protein 1 precursor, putative, expressed
MaizeGDB (Corn) Zm00025a005688 , Zm00025a052900 , Zm00025a034213 , Zm00025a003782 , Zm00025a001541
Brachypodium PNT65024 , KQK22607
Barley HORVU4Hr1G063690.5 , HORVU4Hr1G063690.6 , HORVU4Hr1G063690.8 , HORVU4Hr1G063690.9 , HORVU4Hr1G063690.1 , HORVU4Hr1G063690.2 , HORVU4Hr1G063690.3 , HORVU4Hr1G063690.7
Wheat TraesCS4D02G227400 , TraesCS4A02G070700
Populus -


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cDNA sequences
Sobic.001G439100


Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.003G174700 expressed protein -
2 Sobic.010G215800 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@expressed protein -
3 Sobic.010G222100 MBTB10 - Bric-a-Brac, Tramtrack, Broad Complex BTB domain with Meprin and TRAF Homology MATH domain, expressed K10523: speckle-type POZ protein
4 Sobic.002G247800 Highest expression level in primordial inflorescence(PubMedID : 27501690)@OsSPL17 - SBP-box gene family member, expressed -
5 Sobic.003G279100 mitochondrial ATP synthase g subunit family protein, putative, expressed K02140: ATPeFG, ATP5L, F-type H+-transporting ATPase subunit g
6 Sobic.010G163732 - -
7 Sobic.004G217450 - -
8 Sobic.002G039100 "SAG (Senescence-associated gene): differentially expressed gene during developmental, salt-induced, and dark-induced senescence."(PubMedID : 27586543)@glutaredoxin, putative, expressed K17479: glutaredoxin domain-containing cysteine-rich protein 1
9 Sobic.003G379600 methyltransferase, putative, expressed -
10 Sobic.003G383100 STE_MEK_ste7_MAP2K.3 - STE kinases include homologs to sterile 7, sterile 11 and sterile 20 from yeast, expressed -
11 Sobic.002G350500 AP2 domain containing protein, expressed K09286: EREBP-like factor
12 Sobic.001G399300 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@protein phosphotase protein, putative, expressed -
13 Sobic.010G159100 DUF538 domain containing protein, putative, expressed -
14 Sobic.001G505000 cyclin-dependent kinases regulatory subunit 1, putative, expressed K02219: cyclin-dependent kinase regulatory subunit CKS1
15 Sobic.001G529400 Core histone H2A/H2B/H3/H4 domain containing protein, putative, expressed K11254: histone H4
16 Sobic.006G149200 LSM domain containing protein, expressed K11096: SNRPD2, small nuclear ribonucleoprotein D2
17 Sobic.005G129700 SAG (Senescence-associated gene): up-regulated gene during salt-induced senescence.(PubMedID : 27586543)@sex determination protein tasselseed-2, putative, expressed -
18 Sobic.001G464900 "Ca ATPase, IIB type"(PubMedID : 22196357)@SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@calcium-transporting ATPase, plasma membrane-type, putative, expressed K01537: P-type Ca2+ transporter type 2C
19 Sobic.003G034600 CAMK_CAMK_like_Aur_like.1 - CAMK includes calcium/calmodulin depedent protein kinases, expressed K08850: aurora kinase, other
20 Sobic.010G227200 expressed protein -


Gene co-expression network
sample Sobic001G439100 Sobic001G439100 Sobic003G174700 Sobic003G174700 Sobic001G439100--Sobic003G174700 Sobic010G215800 Sobic010G215800 Sobic001G439100--Sobic010G215800 Sobic010G222100 Sobic010G222100 Sobic001G439100--Sobic010G222100 Sobic002G247800 Sobic002G247800 Sobic001G439100--Sobic002G247800 Sobic003G279100 Sobic003G279100 Sobic001G439100--Sobic003G279100 Sobic010G163732 Sobic010G163732 Sobic001G439100--Sobic010G163732 Sobic004G217450 Sobic004G217450 Sobic001G439100--Sobic004G217450 Sobic002G039100 Sobic002G039100 Sobic001G439100--Sobic002G039100 Sobic003G379600 Sobic003G379600 Sobic001G439100--Sobic003G379600 Sobic003G174700--Sobic004G217450 Sobic003G034600 Sobic003G034600 Sobic003G174700--Sobic003G034600 Sobic006G137800 Sobic006G137800 Sobic003G174700--Sobic006G137800 Sobic006G260300 Sobic006G260300 Sobic003G174700--Sobic006G260300 Sobic006G191800 Sobic006G191800 Sobic003G174700--Sobic006G191800 Sobic010G221300 Sobic010G221300 Sobic003G174700--Sobic010G221300 Sobic003G160700 Sobic003G160700 Sobic003G174700--Sobic003G160700 Sobic001G529400 Sobic001G529400 Sobic003G174700--Sobic001G529400 Sobic003G174700--Sobic001G439100 Sobic010G215800--Sobic010G222100 Sobic002G289800 Sobic002G289800 Sobic010G215800--Sobic002G289800 Sobic010G239400 Sobic010G239400 Sobic010G215800--Sobic010G239400 Sobic010G215800--Sobic001G439100 Sobic010G215800--Sobic002G039100 Sobic010G215800--Sobic003G279100 Sobic005G129700 Sobic005G129700 Sobic010G215800--Sobic005G129700 Sobic009G033800 Sobic009G033800 Sobic010G215800--Sobic009G033800 Sobic001G505000 Sobic001G505000 Sobic010G215800--Sobic001G505000 Sobic010G222100--Sobic002G289800 Sobic010G222100--Sobic009G033800 Sobic002G353200 Sobic002G353200 Sobic010G222100--Sobic002G353200 Sobic010G222100--Sobic010G215800 Sobic001G289900 Sobic001G289900 Sobic010G222100--Sobic001G289900 Sobic010G222100--Sobic001G505000 Sobic010G222100--Sobic005G129700 Sobic007G132900 Sobic007G132900 Sobic010G222100--Sobic007G132900 Sobic010G222100--Sobic003G279100 Sobic007G225400 Sobic007G225400 Sobic002G247800--Sobic007G225400 Sobic002G179150 Sobic002G179150 Sobic002G247800--Sobic002G179150 Sobic004G170900 Sobic004G170900 Sobic002G247800--Sobic004G170900 Sobic001G470100 Sobic001G470100 Sobic002G247800--Sobic001G470100 Sobic005G142500 Sobic005G142500 Sobic002G247800--Sobic005G142500 Sobic004G285900 Sobic004G285900 Sobic002G247800--Sobic004G285900 Sobic001G030400 Sobic001G030400 Sobic002G247800--Sobic001G030400 Sobic010G159100 Sobic010G159100 Sobic002G247800--Sobic010G159100 Sobic003G011100 Sobic003G011100 Sobic002G247800--Sobic003G011100 Sobic003G279100--Sobic004G217450 Sobic006G149200 Sobic006G149200 Sobic003G279100--Sobic006G149200 Sobic003G279100--Sobic004G285900 Sobic001G300400 Sobic001G300400 Sobic003G279100--Sobic001G300400 Sobic003G279100--Sobic010G222100 Sobic006G081800 Sobic006G081800 Sobic003G279100--Sobic006G081800 Sobic003G279100--Sobic010G215800 Sobic003G279100--Sobic001G505000 Sobic001G261549 Sobic001G261549 Sobic003G279100--Sobic001G261549 Sobic003G383100 Sobic003G383100 Sobic010G163732--Sobic003G383100 Sobic003G137700 Sobic003G137700 Sobic010G163732--Sobic003G137700 Sobic010G163732--Sobic001G439100 Sobic010G163732--Sobic003G174700 Sobic010G171800 Sobic010G171800 Sobic010G163732--Sobic010G171800 Sobic009G120700 Sobic009G120700 Sobic010G163732--Sobic009G120700 Sobic002G095400 Sobic002G095400 Sobic010G163732--Sobic002G095400 Sobic010G163732--Sobic010G215800 Sobic001G160100 Sobic001G160100 Sobic010G163732--Sobic001G160100 Sobic002G385400 Sobic002G385400 Sobic004G217450--Sobic002G385400 Sobic004G217450--Sobic003G034600 Sobic004G217450--Sobic003G279100 Sobic004G217450--Sobic006G149200 Sobic004G274900 Sobic004G274900 Sobic004G217450--Sobic004G274900 Sobic007G198000 Sobic007G198000 Sobic004G217450--Sobic007G198000 Sobic004G217450--Sobic003G174700 Sobic008G025600 Sobic008G025600 Sobic004G217450--Sobic008G025600 Sobic006G115000 Sobic006G115000 Sobic004G217450--Sobic006G115000 Sobic002G039100--Sobic010G215800 Sobic002G039100--Sobic001G505000 Sobic006G013900 Sobic006G013900 Sobic002G039100--Sobic006G013900 Sobic009G165500 Sobic009G165500 Sobic002G039100--Sobic009G165500 Sobic002G039100--Sobic010G222100 Sobic002G039100--Sobic003G279100 Sobic002G039100--Sobic006G149200 Sobic002G039100--Sobic003G383100 Sobic001G399300 Sobic001G399300 Sobic002G039100--Sobic001G399300 Sobic003G379600--Sobic006G137800 Sobic003G379600--Sobic007G198000 Sobic001G533000 Sobic001G533000 Sobic003G379600--Sobic001G533000 Sobic001G459900 Sobic001G459900 Sobic003G379600--Sobic001G459900 Sobic001G475500 Sobic001G475500 Sobic003G379600--Sobic001G475500 Sobic006G159600 Sobic006G159600 Sobic003G379600--Sobic006G159600 Sobic003G379600--Sobic004G217450 Sobic003G379600--Sobic003G160700 Sobic004G345500 Sobic004G345500 Sobic003G379600--Sobic004G345500
Octagon: transcription factors


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