Gene annotation
Transcriptome id Sobic.003G383100.1
Synonym ATMKK9, MKK9, Sb03g042260
Functional annotation STE_MEK_ste7_MAP2K.3 - STE kinases include homologs to sterile 7, sterile 11 and sterile 20 from yeast, expressed
UniProt A0A1W0W0U7
Pfam PF07714
Panther DB PTHR24361 PTHR24361:SF325
NCBI CDD KOG0581; Mitogen-activated protein kinase kinase (MAP2K)
KEGG Orthology -
Gene Ontology GO:0006468; protein phosphorylation GO:0004672protein kinase activity


Orthologs (automatic annotation)
TAIR AT1G73500 : MAP kinase kinase 9
RAP-DB (Rice) LOC_Os01g42400.1 : STE_MEK_ste7_MAP2K.3 - STE kinases include homologs to sterile 7, sterile 11 and sterile 20 from yeast, expressed
MaizeGDB (Corn) Zm00025a027807
Brachypodium -
Barley HORVU1Hr1G086310.1
Wheat -
Populus -


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Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.001G529400 Core histone H2A/H2B/H3/H4 domain containing protein, putative, expressed K11254: histone H4
2 Sobic.010G163732 - -
3 Sobic.006G191800 Core histone H2A/H2B/H3/H4 domain containing protein, putative, expressed K11254: histone H4
4 Sobic.009G015900 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@Core histone H2A/H2B/H3/H4 domain containing protein, putative, expressed K11251: histone H2A
5 Sobic.003G174700 expressed protein -
6 Sobic.002G039100 "SAG (Senescence-associated gene): differentially expressed gene during developmental, salt-induced, and dark-induced senescence."(PubMedID : 27586543)@glutaredoxin, putative, expressed K17479: glutaredoxin domain-containing cysteine-rich protein 1
7 Sobic.003G279100 mitochondrial ATP synthase g subunit family protein, putative, expressed K02140: ATPeFG, ATP5L, F-type H+-transporting ATPase subunit g
8 Sobic.001G505000 cyclin-dependent kinases regulatory subunit 1, putative, expressed K02219: cyclin-dependent kinase regulatory subunit CKS1
9 Sobic.010G047100 histone H3, putative, expressed K11253: histone H3
10 Sobic.002G350500 AP2 domain containing protein, expressed K09286: EREBP-like factor
11 Sobic.001G313200 SAG (Senescence-associated gene): up-regulated gene during salt-induced senescence.(PubMedID : 27586543)@Core histone H2A/H2B/H3/H4 domain containing protein, putative, expressed K11254: histone H4
12 Sobic.003G232400 "SAG (Senescence-associated gene): differentially expressed gene during developmental, salt-induced, and dark-induced senescence."(PubMedID : 27586543)@hydrolase, alpha/beta fold family domain containing protein, expressed -
13 Sobic.003G057100 Core histone H2A/H2B/H3/H4 domain containing protein, putative, expressed K11254: histone H4
14 Sobic.010G221300 expressed protein -
15 Sobic.001G439100 thaumatin-like protein 1 precursor, putative, expressed -
16 Sobic.001G533000 expressed protein -
17 Sobic.010G215800 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@expressed protein -
18 Sobic.006G081800 histone H3, putative, expressed K11253: histone H3
19 Sobic.002G291066 - K11254: histone H4
20 Sobic.006G031900 expansin precursor, putative, expressed -


Gene co-expression network
sample Sobic003G383100 Sobic003G383100 Sobic001G529400 Sobic001G529400 Sobic003G383100--Sobic001G529400 Sobic010G163732 Sobic010G163732 Sobic003G383100--Sobic010G163732 Sobic006G191800 Sobic006G191800 Sobic003G383100--Sobic006G191800 Sobic009G015900 Sobic009G015900 Sobic003G383100--Sobic009G015900 Sobic003G174700 Sobic003G174700 Sobic003G383100--Sobic003G174700 Sobic002G039100 Sobic002G039100 Sobic003G383100--Sobic002G039100 Sobic003G279100 Sobic003G279100 Sobic003G383100--Sobic003G279100 Sobic001G505000 Sobic001G505000 Sobic003G383100--Sobic001G505000 Sobic010G047100 Sobic010G047100 Sobic003G383100--Sobic010G047100 Sobic001G313200 Sobic001G313200 Sobic001G529400--Sobic001G313200 Sobic001G529400--Sobic010G047100 Sobic001G529400--Sobic006G191800 Sobic001G529400--Sobic009G015900 Sobic003G347900 Sobic003G347900 Sobic001G529400--Sobic003G347900 Sobic010G221300 Sobic010G221300 Sobic001G529400--Sobic010G221300 Sobic003G078200 Sobic003G078200 Sobic001G529400--Sobic003G078200 Sobic006G137800 Sobic006G137800 Sobic001G529400--Sobic006G137800 Sobic003G057100 Sobic003G057100 Sobic001G529400--Sobic003G057100 Sobic010G163732--Sobic003G383100 Sobic003G137700 Sobic003G137700 Sobic010G163732--Sobic003G137700 Sobic001G439100 Sobic001G439100 Sobic010G163732--Sobic001G439100 Sobic010G163732--Sobic003G174700 Sobic010G171800 Sobic010G171800 Sobic010G163732--Sobic010G171800 Sobic009G120700 Sobic009G120700 Sobic010G163732--Sobic009G120700 Sobic002G095400 Sobic002G095400 Sobic010G163732--Sobic002G095400 Sobic010G215800 Sobic010G215800 Sobic010G163732--Sobic010G215800 Sobic001G160100 Sobic001G160100 Sobic010G163732--Sobic001G160100 Sobic006G191800--Sobic010G221300 Sobic006G191800--Sobic001G529400 Sobic006G191800--Sobic010G047100 Sobic001G361600 Sobic001G361600 Sobic006G191800--Sobic001G361600 Sobic003G125650 Sobic003G125650 Sobic006G191800--Sobic003G125650 Sobic006G191800--Sobic001G313200 Sobic002G389400 Sobic002G389400 Sobic006G191800--Sobic002G389400 Sobic001G295200 Sobic001G295200 Sobic006G191800--Sobic001G295200 Sobic003G160700 Sobic003G160700 Sobic006G191800--Sobic003G160700 Sobic009G015900--Sobic001G529400 Sobic009G015900--Sobic006G191800 Sobic002G422300 Sobic002G422300 Sobic009G015900--Sobic002G422300 Sobic009G015900--Sobic001G313200 Sobic009G015900--Sobic010G047100 Sobic002G276000 Sobic002G276000 Sobic009G015900--Sobic002G276000 Sobic001G188800 Sobic001G188800 Sobic009G015900--Sobic001G188800 Sobic009G015900--Sobic003G347900 Sobic009G015900--Sobic003G057100 Sobic004G217450 Sobic004G217450 Sobic003G174700--Sobic004G217450 Sobic003G034600 Sobic003G034600 Sobic003G174700--Sobic003G034600 Sobic003G174700--Sobic006G137800 Sobic006G260300 Sobic006G260300 Sobic003G174700--Sobic006G260300 Sobic003G174700--Sobic006G191800 Sobic003G174700--Sobic010G221300 Sobic003G174700--Sobic003G160700 Sobic003G174700--Sobic001G529400 Sobic003G174700--Sobic001G439100 Sobic002G039100--Sobic010G215800 Sobic002G039100--Sobic001G505000 Sobic006G013900 Sobic006G013900 Sobic002G039100--Sobic006G013900 Sobic009G165500 Sobic009G165500 Sobic002G039100--Sobic009G165500 Sobic010G222100 Sobic010G222100 Sobic002G039100--Sobic010G222100 Sobic002G039100--Sobic003G279100 Sobic006G149200 Sobic006G149200 Sobic002G039100--Sobic006G149200 Sobic002G039100--Sobic003G383100 Sobic001G399300 Sobic001G399300 Sobic002G039100--Sobic001G399300 Sobic003G279100--Sobic004G217450 Sobic003G279100--Sobic006G149200 Sobic004G285900 Sobic004G285900 Sobic003G279100--Sobic004G285900 Sobic001G300400 Sobic001G300400 Sobic003G279100--Sobic001G300400 Sobic003G279100--Sobic010G222100 Sobic006G081800 Sobic006G081800 Sobic003G279100--Sobic006G081800 Sobic003G279100--Sobic010G215800 Sobic003G279100--Sobic001G505000 Sobic001G261549 Sobic001G261549 Sobic003G279100--Sobic001G261549 Sobic001G505000--Sobic009G165500 Sobic001G107300 Sobic001G107300 Sobic001G505000--Sobic001G107300 Sobic001G505000--Sobic006G149200 Sobic002G289800 Sobic002G289800 Sobic001G505000--Sobic002G289800 Sobic001G505000--Sobic010G222100 Sobic006G115000 Sobic006G115000 Sobic001G505000--Sobic006G115000 Sobic001G505000--Sobic006G013900 Sobic001G429000 Sobic001G429000 Sobic001G505000--Sobic001G429000 Sobic001G505000--Sobic003G174700 Sobic010G047100--Sobic001G313200 Sobic010G047100--Sobic001G529400 Sobic004G041900 Sobic004G041900 Sobic010G047100--Sobic004G041900 Sobic010G047100--Sobic006G191800 Sobic010G047100--Sobic010G221300 Sobic001G031700 Sobic001G031700 Sobic010G047100--Sobic001G031700 Sobic010G047100--Sobic003G160700 Sobic003G322532 Sobic003G322532 Sobic010G047100--Sobic003G322532 Sobic010G047100--Sobic003G125650
Octagon: transcription factors


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