Gene annotation
Transcriptome id Sobic.010G159100.1
Synonym Sb10g021150, SVB
Functional annotation DUF538 domain containing protein, putative, expressed
UniProt C5Z425
Pfam PF04398
Panther DB PTHR31676 PTHR31676:SF24
NCBI CDD -
KEGG Orthology -
Gene Ontology -


Orthologs (automatic annotation)
TAIR AT1G09310 : Protein of unknown function, DUF538
RAP-DB (Rice) LOC_Os06g34790.1 : DUF538 domain containing protein, putative, expressed
MaizeGDB (Corn) Zm00025a042352
Brachypodium KQK06454 , KQK06453
Barley -
Wheat TraesCS3B02G053600
Populus -


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Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.002G241500 tentative name(PubMedID : 31536532)@core histone H2A/H2B/H3/H4, putative, expressed -
2 Sobic.010G001800 DNA-binding protein-related, putative, expressed K07466: RFA1, RPA1, replication factor A1
3 Sobic.002G247800 Highest expression level in primordial inflorescence(PubMedID : 27501690)@OsSPL17 - SBP-box gene family member, expressed -
4 Sobic.004G285900 HMG1/2, putative, expressed -
5 Sobic.001G389300 OsFBX82 - F-box domain containing protein, expressed -
6 Sobic.001G108400 LRR receptor-like protein kinase, putative, expressed -
7 Sobic.007G225400 phosphate-induced protein 1 conserved region domain containing protein, expressed -
8 Sobic.007G214700 fasciclin domain containing protein, expressed -
9 Sobic.002G179150 - -
10 Sobic.005G047100 actin, putative, expressed K10355: actin, other eukaryote
11 Sobic.003G011100 reticulon domain containing protein, putative, expressed -
12 Sobic.003G427700 expressed protein -
13 Sobic.001G261549 - -
14 Sobic.002G227900 gibberellin receptor GID1L2, putative, expressed -
15 Sobic.001G470100 OsFBX77 - F-box domain containing protein, expressed -
16 Sobic.001G310900 expressed protein -
17 Sobic.010G216600 expressed protein -
18 Sobic.005G142500 plant protein of unknown function domain containing protein, expressed -
19 Sobic.007G111200 protein kinase family protein, putative, expressed -
20 Sobic.001G196100 src homology-3 domain protein 3, putative, expressed -


Gene co-expression network
sample Sobic010G159100 Sobic010G159100 Sobic002G241500 Sobic002G241500 Sobic010G159100--Sobic002G241500 Sobic010G001800 Sobic010G001800 Sobic010G159100--Sobic010G001800 Sobic002G247800 Sobic002G247800 Sobic010G159100--Sobic002G247800 Sobic004G285900 Sobic004G285900 Sobic010G159100--Sobic004G285900 Sobic001G389300 Sobic001G389300 Sobic010G159100--Sobic001G389300 Sobic001G108400 Sobic001G108400 Sobic010G159100--Sobic001G108400 Sobic007G225400 Sobic007G225400 Sobic010G159100--Sobic007G225400 Sobic007G214700 Sobic007G214700 Sobic010G159100--Sobic007G214700 Sobic002G179150 Sobic002G179150 Sobic010G159100--Sobic002G179150 Sobic006G281200 Sobic006G281200 Sobic002G241500--Sobic006G281200 Sobic002G241500--Sobic010G001800 Sobic002G241500--Sobic010G159100 Sobic003G003000 Sobic003G003000 Sobic002G241500--Sobic003G003000 Sobic003G283300 Sobic003G283300 Sobic002G241500--Sobic003G283300 Sobic002G361900 Sobic002G361900 Sobic002G241500--Sobic002G361900 Sobic006G181700 Sobic006G181700 Sobic002G241500--Sobic006G181700 Sobic008G127500 Sobic008G127500 Sobic002G241500--Sobic008G127500 Sobic001G110300 Sobic001G110300 Sobic002G241500--Sobic001G110300 Sobic001G440900 Sobic001G440900 Sobic010G001800--Sobic001G440900 Sobic007G108100 Sobic007G108100 Sobic010G001800--Sobic007G108100 Sobic010G001800--Sobic002G241500 Sobic010G001800--Sobic010G159100 Sobic001G505000 Sobic001G505000 Sobic010G001800--Sobic001G505000 Sobic008G008300 Sobic008G008300 Sobic010G001800--Sobic008G008300 Sobic008G093200 Sobic008G093200 Sobic010G001800--Sobic008G093200 Sobic010G001800--Sobic001G108400 Sobic009G001200 Sobic009G001200 Sobic010G001800--Sobic009G001200 Sobic002G247800--Sobic007G225400 Sobic002G247800--Sobic002G179150 Sobic004G170900 Sobic004G170900 Sobic002G247800--Sobic004G170900 Sobic001G470100 Sobic001G470100 Sobic002G247800--Sobic001G470100 Sobic005G142500 Sobic005G142500 Sobic002G247800--Sobic005G142500 Sobic002G247800--Sobic004G285900 Sobic001G030400 Sobic001G030400 Sobic002G247800--Sobic001G030400 Sobic002G247800--Sobic010G159100 Sobic003G011100 Sobic003G011100 Sobic002G247800--Sobic003G011100 Sobic001G078600 Sobic001G078600 Sobic004G285900--Sobic001G078600 Sobic001G261549 Sobic001G261549 Sobic004G285900--Sobic001G261549 Sobic004G279601 Sobic004G279601 Sobic004G285900--Sobic004G279601 Sobic004G285900--Sobic007G214700 Sobic006G102900 Sobic006G102900 Sobic004G285900--Sobic006G102900 Sobic002G162300 Sobic002G162300 Sobic004G285900--Sobic002G162300 Sobic007G154500 Sobic007G154500 Sobic004G285900--Sobic007G154500 Sobic009G189200 Sobic009G189200 Sobic004G285900--Sobic009G189200 Sobic001G205000 Sobic001G205000 Sobic004G285900--Sobic001G205000 Sobic010G216600 Sobic010G216600 Sobic001G389300--Sobic010G216600 Sobic009G242501 Sobic009G242501 Sobic001G389300--Sobic009G242501 Sobic001G389300--Sobic004G170900 Sobic001G389300--Sobic007G225400 Sobic001G389300--Sobic002G179150 Sobic001G389300--Sobic002G247800 Sobic009G248900 Sobic009G248900 Sobic001G389300--Sobic009G248900 Sobic003G116100 Sobic003G116100 Sobic001G389300--Sobic003G116100 Sobic002G419200 Sobic002G419200 Sobic001G389300--Sobic002G419200 Sobic007G044400 Sobic007G044400 Sobic001G108400--Sobic007G044400 Sobic003G410600 Sobic003G410600 Sobic001G108400--Sobic003G410600 Sobic002G313600 Sobic002G313600 Sobic001G108400--Sobic002G313600 Sobic001G108400--Sobic009G001200 Sobic001G404700 Sobic001G404700 Sobic001G108400--Sobic001G404700 Sobic006G207400 Sobic006G207400 Sobic001G108400--Sobic006G207400 Sobic003G017500 Sobic003G017500 Sobic001G108400--Sobic003G017500 Sobic001G169800 Sobic001G169800 Sobic001G108400--Sobic001G169800 Sobic001G026600 Sobic001G026600 Sobic001G108400--Sobic001G026600 Sobic007G225400--Sobic004G170900 Sobic005G098400 Sobic005G098400 Sobic007G225400--Sobic005G098400 Sobic007G225400--Sobic010G216600 Sobic005G047100 Sobic005G047100 Sobic007G225400--Sobic005G047100 Sobic002G226500 Sobic002G226500 Sobic007G225400--Sobic002G226500 Sobic005G121700 Sobic005G121700 Sobic007G225400--Sobic005G121700 Sobic002G016400 Sobic002G016400 Sobic007G225400--Sobic002G016400 Sobic001G305300 Sobic001G305300 Sobic007G225400--Sobic001G305300 Sobic001G264400 Sobic001G264400 Sobic007G225400--Sobic001G264400 Sobic007G214700--Sobic004G285900 Sobic007G214700--Sobic001G261549 Sobic001G300400 Sobic001G300400 Sobic007G214700--Sobic001G300400 Sobic007G214700--Sobic004G279601 Sobic007G176800 Sobic007G176800 Sobic007G214700--Sobic007G176800 Sobic007G214700--Sobic001G078600 Sobic007G214700--Sobic002G179150 Sobic007G214700--Sobic002G162300 Sobic004G313200 Sobic004G313200 Sobic007G214700--Sobic004G313200 Sobic002G179150--Sobic002G247800 Sobic002G179150--Sobic007G214700 Sobic001G107200 Sobic001G107200 Sobic002G179150--Sobic001G107200 Sobic002G179150--Sobic001G389300 Sobic002G179150--Sobic010G216600 Sobic002G179150--Sobic001G030400 Sobic001G528600 Sobic001G528600 Sobic002G179150--Sobic001G528600 Sobic002G353200 Sobic002G353200 Sobic002G179150--Sobic002G353200 Sobic010G111200 Sobic010G111200 Sobic002G179150--Sobic010G111200
Octagon: transcription factors


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