Gene annotation
Transcriptome id Sobic.001G310900.1
Synonym Sb01g030310
Functional annotation expressed protein
UniProt C5WTJ4
Pfam PF03087
Panther DB PTHR33070 PTHR33070:SF8
NCBI CDD -
KEGG Orthology -
Gene Ontology -


Orthologs (automatic annotation)
TAIR AT1G76240 : Arabidopsis protein of unknown function (DUF241)
RAP-DB (Rice) LOC_Os10g39660.1 : expressed protein
MaizeGDB (Corn) Zm00025a052272 , Zm00025a003204
Brachypodium PNT67812
Barley HORVU1Hr1G052400.2 , HORVU1Hr1G052400.3
Wheat -
Populus -


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cDNA sequences
Sobic.001G310900


Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.007G094200 expressed protein -
2 Sobic.008G154700 expressed protein -
3 Sobic.006G219100 expressed protein -
4 Sobic.003G300400 expressed protein -
5 Sobic.003G116100 pectinesterase, putative, expressed K01051: pectinesterase
6 Sobic.010G027700 OsSAUR24 - Auxin-responsive SAUR gene family member, expressed K14488: SAUR family protein
7 Sobic.002G382500 heavy metal-associated domain containing protein, expressed -
8 Sobic.002G416400 basic helix-loop-helix domain containing protein, expressed -
9 Sobic.003G339600 Homologous to EPF/EPFL genes in Arabidopsis. Modelling of protein structure.(PubMedID : 23755192)@expressed protein -
10 Sobic.004G045500 phytosulfokine receptor precursor, putative, expressed -
11 Sobic.002G419200 inactive receptor kinase At2g26730 precursor, putative, expressed -
12 Sobic.003G178500 3-ketoacyl-CoA synthase, putative, expressed K15397: 3-ketoacyl-CoA synthase
13 Sobic.002G032500 leucine-rich repeat family protein, putative, expressed -
14 Sobic.007G180200 NC domain-containing protein, putative, expressed -
15 Sobic.002G068400 - -
16 Sobic.009G235700 transporter family protein, putative, expressed K08145: SLC2A8, MFS transporter, SP family, solute carrier family 2 (facilitated glucose transporter), member 8
17 Sobic.008G035400 stress responsive A/B Barrel domain containing protein, expressed -
18 Sobic.006G044200 glycosyl hydrolase, putative, expressed K01183: chitinase
19 Sobic.006G125800 oxidoreductase, short chain dehydrogenase/reductase family, putative, expressed K10251: HSD17B12, KAR, 17beta-estradiol 17-dehydrogenase / very-long-chain 3-oxoacyl-CoA reductase
20 Sobic.004G283800 dehydration response related protein, putative, expressed -


Gene co-expression network
sample Sobic001G310900 Sobic001G310900 Sobic007G094200 Sobic007G094200 Sobic001G310900--Sobic007G094200 Sobic008G154700 Sobic008G154700 Sobic001G310900--Sobic008G154700 Sobic006G219100 Sobic006G219100 Sobic001G310900--Sobic006G219100 Sobic003G300400 Sobic003G300400 Sobic001G310900--Sobic003G300400 Sobic003G116100 Sobic003G116100 Sobic001G310900--Sobic003G116100 Sobic010G027700 Sobic010G027700 Sobic001G310900--Sobic010G027700 Sobic002G382500 Sobic002G382500 Sobic001G310900--Sobic002G382500 Sobic002G416400 Sobic002G416400 Sobic001G310900--Sobic002G416400 Sobic003G339600 Sobic003G339600 Sobic001G310900--Sobic003G339600 Sobic002G032500 Sobic002G032500 Sobic007G094200--Sobic002G032500 Sobic007G094200--Sobic002G416400 Sobic007G094200--Sobic008G154700 Sobic003G178500 Sobic003G178500 Sobic007G094200--Sobic003G178500 Sobic004G342000 Sobic004G342000 Sobic007G094200--Sobic004G342000 Sobic007G094200--Sobic010G027700 Sobic001G438500 Sobic001G438500 Sobic007G094200--Sobic001G438500 Sobic004G227900 Sobic004G227900 Sobic007G094200--Sobic004G227900 Sobic007G094200--Sobic006G219100 Sobic008G154700--Sobic007G094200 Sobic008G154700--Sobic002G416400 Sobic008G154700--Sobic006G219100 Sobic008G154700--Sobic003G300400 Sobic008G154700--Sobic010G027700 Sobic008G154700--Sobic001G438500 Sobic008G154700--Sobic002G032500 Sobic008G004200 Sobic008G004200 Sobic008G154700--Sobic008G004200 Sobic008G154700--Sobic004G342000 Sobic006G219100--Sobic007G094200 Sobic004G215000 Sobic004G215000 Sobic006G219100--Sobic004G215000 Sobic001G179400 Sobic001G179400 Sobic006G219100--Sobic001G179400 Sobic006G219100--Sobic004G227900 Sobic006G219100--Sobic008G154700 Sobic006G219100--Sobic003G116100 Sobic006G219100--Sobic010G027700 Sobic002G068400 Sobic002G068400 Sobic006G219100--Sobic002G068400 Sobic006G219100--Sobic004G342000 Sobic003G309400 Sobic003G309400 Sobic003G300400--Sobic003G309400 Sobic003G300400--Sobic002G032500 Sobic002G419200 Sobic002G419200 Sobic003G300400--Sobic002G419200 Sobic009G254500 Sobic009G254500 Sobic003G300400--Sobic009G254500 Sobic003G300400--Sobic007G094200 Sobic003G300400--Sobic003G339600 Sobic002G229700 Sobic002G229700 Sobic003G300400--Sobic002G229700 Sobic003G300400--Sobic008G154700 Sobic009G141300 Sobic009G141300 Sobic003G300400--Sobic009G141300 Sobic003G116100--Sobic002G419200 Sobic003G116100--Sobic007G094200 Sobic003G338200 Sobic003G338200 Sobic003G116100--Sobic003G338200 Sobic003G116100--Sobic006G219100 Sobic006G044200 Sobic006G044200 Sobic003G116100--Sobic006G044200 Sobic001G488400 Sobic001G488400 Sobic003G116100--Sobic001G488400 Sobic003G277200 Sobic003G277200 Sobic003G116100--Sobic003G277200 Sobic003G116100--Sobic003G300400 Sobic008G187400 Sobic008G187400 Sobic003G116100--Sobic008G187400 Sobic010G027700--Sobic002G068400 Sobic010G027700--Sobic004G215000 Sobic010G027700--Sobic001G438500 Sobic007G125400 Sobic007G125400 Sobic010G027700--Sobic007G125400 Sobic003G120600 Sobic003G120600 Sobic010G027700--Sobic003G120600 Sobic010G027700--Sobic001G179400 Sobic010G027700--Sobic007G094200 Sobic002G023700 Sobic002G023700 Sobic010G027700--Sobic002G023700 Sobic009G037300 Sobic009G037300 Sobic010G027700--Sobic009G037300 Sobic002G382500--Sobic010G027700 Sobic002G382500--Sobic002G068400 Sobic008G035400 Sobic008G035400 Sobic002G382500--Sobic008G035400 Sobic002G382500--Sobic003G339600 Sobic002G382500--Sobic006G044200 Sobic002G382500--Sobic001G488400 Sobic002G382500--Sobic006G219100 Sobic002G382500--Sobic009G037300 Sobic002G382500--Sobic002G023700 Sobic002G416400--Sobic003G178500 Sobic007G076100 Sobic007G076100 Sobic002G416400--Sobic007G076100 Sobic004G318800 Sobic004G318800 Sobic002G416400--Sobic004G318800 Sobic005G218000 Sobic005G218000 Sobic002G416400--Sobic005G218000 Sobic002G416400--Sobic007G094200 Sobic001G341700 Sobic001G341700 Sobic002G416400--Sobic001G341700 Sobic002G416400--Sobic004G342000 Sobic006G079500 Sobic006G079500 Sobic002G416400--Sobic006G079500 Sobic006G092300 Sobic006G092300 Sobic002G416400--Sobic006G092300 Sobic010G020600 Sobic010G020600 Sobic003G339600--Sobic010G020600 Sobic003G339600--Sobic003G300400 Sobic003G339600--Sobic009G254500 Sobic004G248100 Sobic004G248100 Sobic003G339600--Sobic004G248100 Sobic003G339600--Sobic002G229700 Sobic004G283800 Sobic004G283800 Sobic003G339600--Sobic004G283800 Sobic003G339600--Sobic003G309400 Sobic003G339600--Sobic002G382500 Sobic007G189400 Sobic007G189400 Sobic003G339600--Sobic007G189400
Octagon: transcription factors


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