Gene annotation
Transcriptome id Sobic.001G470100.1
Synonym Sb01g044060, SLY2
Functional annotation OsFBX77 - F-box domain containing protein, expressed
UniProt A0A1Z5SAX4
Pfam PF12937
Panther DB PTHR20995 PTHR20995:SF22
NCBI CDD -
KEGG Orthology -
Gene Ontology GO:0005515; protein binding


Orthologs (automatic annotation)
TAIR AT5G48170 : F-box family protein
RAP-DB (Rice) LOC_Os03g10040.1 : OsFBX77 - F-box domain containing protein, expressed
MaizeGDB (Corn) Zm00025a001220 , Zm00025a053179
Brachypodium KQK23138
Barley HORVU4Hr1G071100.3 , HORVU4Hr1G071100.2
Wheat -
Populus -


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Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.002G251100 ternary complex factor MIP1, putative, expressed -
2 Sobic.005G047100 actin, putative, expressed K10355: actin, other eukaryote
3 Sobic.001G038300 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@leaf senescence related protein, putative, expressed -
4 Sobic.001G156500 AGC_PVPK_like_kin82y.9 - ACG kinases include homologs to PKA, PKG and PKC, expressed -
5 Sobic.002G247800 Highest expression level in primordial inflorescence(PubMedID : 27501690)@OsSPL17 - SBP-box gene family member, expressed -
6 Sobic.007G150800 expressed protein -
7 Sobic.004G285900 HMG1/2, putative, expressed -
8 Sobic.001G261549 - -
9 Sobic.001G107200 tubulin/FtsZ domain containing protein, putative, expressed K07374: tubulin alpha
10 Sobic.003G011100 reticulon domain containing protein, putative, expressed -
11 Sobic.001G107100 "SRS5(Ortholog in rice:Segami, 2012)"(PubMedID : 31659833)@tubulin/FtsZ domain containing protein, putative, expressed K07374: tubulin alpha
12 Sobic.003G321400 plastocyanin-like domain containing protein, putative, expressed -
13 Sobic.004G170900 expressed protein -
14 Sobic.003G034600 CAMK_CAMK_like_Aur_like.1 - CAMK includes calcium/calmodulin depedent protein kinases, expressed K08850: aurora kinase, other
15 Sobic.009G088200 -(PubMedID : 26976818)@triosephosphate/phosphate translocator(PubMedID : 27016024)@phosphate/phosphate translocator, putative, expressed K15283: solute carrier family 35, member E1
16 Sobic.005G142500 plant protein of unknown function domain containing protein, expressed -
17 Sobic.001G521300 expressed protein -
18 Sobic.006G278100 expressed protein -
19 Sobic.001G475500 ras-related protein, putative, expressed K07904: Ras-related protein Rab-11A
20 Sobic.003G250700 fasciclin domain containing protein, expressed -


Gene co-expression network
sample Sobic001G470100 Sobic001G470100 Sobic002G251100 Sobic002G251100 Sobic001G470100--Sobic002G251100 Sobic005G047100 Sobic005G047100 Sobic001G470100--Sobic005G047100 Sobic001G038300 Sobic001G038300 Sobic001G470100--Sobic001G038300 Sobic001G156500 Sobic001G156500 Sobic001G470100--Sobic001G156500 Sobic002G247800 Sobic002G247800 Sobic001G470100--Sobic002G247800 Sobic007G150800 Sobic007G150800 Sobic001G470100--Sobic007G150800 Sobic004G285900 Sobic004G285900 Sobic001G470100--Sobic004G285900 Sobic001G261549 Sobic001G261549 Sobic001G470100--Sobic001G261549 Sobic001G107200 Sobic001G107200 Sobic001G470100--Sobic001G107200 Sobic002G251100--Sobic001G470100 Sobic002G251100--Sobic001G038300 Sobic002G333800 Sobic002G333800 Sobic002G251100--Sobic002G333800 Sobic002G251100--Sobic004G285900 Sobic001G531300 Sobic001G531300 Sobic002G251100--Sobic001G531300 Sobic001G475500 Sobic001G475500 Sobic002G251100--Sobic001G475500 Sobic003G034600 Sobic003G034600 Sobic002G251100--Sobic003G034600 Sobic002G251100--Sobic001G156500 Sobic009G181800 Sobic009G181800 Sobic002G251100--Sobic009G181800 Sobic004G297950 Sobic004G297950 Sobic005G047100--Sobic004G297950 Sobic003G247600 Sobic003G247600 Sobic005G047100--Sobic003G247600 Sobic007G225400 Sobic007G225400 Sobic005G047100--Sobic007G225400 Sobic004G170900 Sobic004G170900 Sobic005G047100--Sobic004G170900 Sobic001G521300 Sobic001G521300 Sobic005G047100--Sobic001G521300 Sobic003G321400 Sobic003G321400 Sobic005G047100--Sobic003G321400 Sobic004G170800 Sobic004G170800 Sobic005G047100--Sobic004G170800 Sobic003G135400 Sobic003G135400 Sobic005G047100--Sobic003G135400 Sobic003G420100 Sobic003G420100 Sobic005G047100--Sobic003G420100 Sobic002G396400 Sobic002G396400 Sobic001G038300--Sobic002G396400 Sobic001G107100 Sobic001G107100 Sobic001G038300--Sobic001G107100 Sobic003G250700 Sobic003G250700 Sobic001G038300--Sobic003G250700 Sobic001G418100 Sobic001G418100 Sobic001G038300--Sobic001G418100 Sobic010G047600 Sobic010G047600 Sobic001G038300--Sobic010G047600 Sobic001G434300 Sobic001G434300 Sobic001G038300--Sobic001G434300 Sobic001G038300--Sobic001G475500 Sobic001G038300--Sobic007G150800 Sobic003G122200 Sobic003G122200 Sobic001G038300--Sobic003G122200 Sobic001G156500--Sobic003G250700 Sobic001G156500--Sobic010G047600 Sobic003G115200 Sobic003G115200 Sobic001G156500--Sobic003G115200 Sobic003G000200 Sobic003G000200 Sobic001G156500--Sobic003G000200 Sobic001G261460 Sobic001G261460 Sobic001G156500--Sobic001G261460 Sobic008G055100 Sobic008G055100 Sobic001G156500--Sobic008G055100 Sobic010G014400 Sobic010G014400 Sobic001G156500--Sobic010G014400 Sobic003G121000 Sobic003G121000 Sobic001G156500--Sobic003G121000 Sobic009G232100 Sobic009G232100 Sobic001G156500--Sobic009G232100 Sobic002G247800--Sobic007G225400 Sobic002G179150 Sobic002G179150 Sobic002G247800--Sobic002G179150 Sobic002G247800--Sobic004G170900 Sobic002G247800--Sobic001G470100 Sobic005G142500 Sobic005G142500 Sobic002G247800--Sobic005G142500 Sobic002G247800--Sobic004G285900 Sobic001G030400 Sobic001G030400 Sobic002G247800--Sobic001G030400 Sobic010G159100 Sobic010G159100 Sobic002G247800--Sobic010G159100 Sobic003G011100 Sobic003G011100 Sobic002G247800--Sobic003G011100 Sobic007G150800--Sobic001G475500 Sobic002G128800 Sobic002G128800 Sobic007G150800--Sobic002G128800 Sobic010G070500 Sobic010G070500 Sobic007G150800--Sobic010G070500 Sobic006G278100 Sobic006G278100 Sobic007G150800--Sobic006G278100 Sobic009G212200 Sobic009G212200 Sobic007G150800--Sobic009G212200 Sobic001G444800 Sobic001G444800 Sobic007G150800--Sobic001G444800 Sobic007G150800--Sobic003G122200 Sobic009G173500 Sobic009G173500 Sobic007G150800--Sobic009G173500 Sobic007G150800--Sobic003G011100 Sobic001G078600 Sobic001G078600 Sobic004G285900--Sobic001G078600 Sobic004G285900--Sobic001G261549 Sobic004G279601 Sobic004G279601 Sobic004G285900--Sobic004G279601 Sobic007G214700 Sobic007G214700 Sobic004G285900--Sobic007G214700 Sobic006G102900 Sobic006G102900 Sobic004G285900--Sobic006G102900 Sobic002G162300 Sobic002G162300 Sobic004G285900--Sobic002G162300 Sobic007G154500 Sobic007G154500 Sobic004G285900--Sobic007G154500 Sobic009G189200 Sobic009G189200 Sobic004G285900--Sobic009G189200 Sobic001G205000 Sobic001G205000 Sobic004G285900--Sobic001G205000 Sobic001G261549--Sobic006G102900 Sobic001G261549--Sobic004G285900 Sobic001G261549--Sobic009G189200 Sobic006G191700 Sobic006G191700 Sobic001G261549--Sobic006G191700 Sobic009G194900 Sobic009G194900 Sobic001G261549--Sobic009G194900 Sobic003G107200 Sobic003G107200 Sobic001G261549--Sobic003G107200 Sobic001G261549--Sobic001G078600 Sobic001G261549--Sobic007G154500 Sobic008G096200 Sobic008G096200 Sobic001G261549--Sobic008G096200 Sobic001G528600 Sobic001G528600 Sobic001G107200--Sobic001G528600 Sobic001G107200--Sobic006G191700 Sobic001G107200--Sobic001G107100 Sobic002G350400 Sobic002G350400 Sobic001G107200--Sobic002G350400 Sobic001G107200--Sobic005G047100 Sobic007G094400 Sobic007G094400 Sobic001G107200--Sobic007G094400 Sobic001G107200--Sobic003G250700 Sobic001G107200--Sobic003G011100 Sobic001G107200--Sobic006G278100
Octagon: transcription factors


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