Gene annotation
Transcriptome id Sobic.003G427700.1
Synonym GLP5, Sb03g045980
Functional annotation expressed protein
UniProt C5XHX2
Pfam PF07883
Panther DB PTHR31238 PTHR31238:SF28
NCBI CDD -
KEGG Orthology -
Gene Ontology -


Orthologs (automatic annotation)
TAIR AT1G09560 : germin-like protein 5
RAP-DB (Rice) LOC_Os01g72290.1 : expressed protein
MaizeGDB (Corn) Zm00025a039119 , Zm00025a043626 , Zm00025a025978
Brachypodium KQK13699 , KQK11561 , KQK11562 , KQK13700
Barley HORVU3Hr1G107930.2 , HORVU3Hr1G107930.1 , HORVU3Hr1G107870.1 , HORVU3Hr1G107830.1 , HORVU3Hr1G107930.3 , HORVU6Hr1G089510.1 , HORVU6Hr1G089510.2 , HORVU3Hr1G107860.1 , HORVU6Hr1G089570.3 , HORVU6Hr1G089570.2 , HORVU6Hr1G089570.1 , HORVU4Hr1G005540.1
Wheat TraesCS3B02G543800 , TraesCS6D02G367000 , TraesCS3D02G489800 , TraesCS3B02G543600 , TraesCSU02G057500 , TraesCS3D02G489700 , TraesCS3D02G490100 , TraesCS3B02G543700 , TraesCS6A02G382900 , TraesCS6B02G422100 , TraesCS7D02G477200 , TraesCS3B02G544000 , TraesCS3D02G490200 , TraesCS3A02G040900 , TraesCS6D02G367800 , TraesCS6B02G422000 , TraesCS3B02G544200 , TraesCS6A02G382200 , TraesCS3D02G490500
Populus -


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Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.005G142500 plant protein of unknown function domain containing protein, expressed -
2 Sobic.005G004700 "domain confirmed by Pfam database, expressed in leaf and root, expression induced by BR treatment"(PubMedID : 20499123)@DUF260 domain containing protein, putative, expressed -
3 Sobic.005G051600 plant protein of unknown function domain containing protein, expressed -
4 Sobic.001G470100 OsFBX77 - F-box domain containing protein, expressed -
5 Sobic.001G264300 hsp20/alpha crystallin family protein, putative, expressed -
6 Sobic.007G213400 SAG (Senescence-associated gene): up-regulated gene during salt-induced senescence.(PubMedID : 27586543)@- -
7 Sobic.001G038300 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@leaf senescence related protein, putative, expressed -
8 Sobic.002G247800 Highest expression level in primordial inflorescence(PubMedID : 27501690)@OsSPL17 - SBP-box gene family member, expressed -
9 Sobic.010G159100 DUF538 domain containing protein, putative, expressed -
10 Sobic.002G233500 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@plastocyanin-like domain containing protein, putative, expressed -
11 Sobic.003G117500 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@RALFL9 - Rapid ALkalinization Factor RALF family protein precursor, expressed -
12 Sobic.004G050700 plastocyanin-like domain containing protein, putative, expressed -
13 Sobic.010G091600 glutaredoxin, putative, expressed K17479: glutaredoxin domain-containing cysteine-rich protein 1
14 Sobic.003G321400 plastocyanin-like domain containing protein, putative, expressed -
15 Sobic.007G225400 phosphate-induced protein 1 conserved region domain containing protein, expressed -
16 Sobic.001G475500 ras-related protein, putative, expressed K07904: Ras-related protein Rab-11A
17 Sobic.010G167800 MATE domain containing protein, expressed K03327: TC.MATE, SLC47A, norM, mdtK, multidrug resistance protein, MATE family
18 Sobic.009G130300 AWPM-19-like membrane family protein, putative, expressed -
19 Sobic.008G139400 expressed protein -
20 Sobic.001G264400 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@hsp20/alpha crystallin family protein, putative, expressed -


Gene co-expression network
sample Sobic003G427700 Sobic003G427700 Sobic005G142500 Sobic005G142500 Sobic003G427700--Sobic005G142500 Sobic005G004700 Sobic005G004700 Sobic003G427700--Sobic005G004700 Sobic005G051600 Sobic005G051600 Sobic003G427700--Sobic005G051600 Sobic001G470100 Sobic001G470100 Sobic003G427700--Sobic001G470100 Sobic001G264300 Sobic001G264300 Sobic003G427700--Sobic001G264300 Sobic007G213400 Sobic007G213400 Sobic003G427700--Sobic007G213400 Sobic001G038300 Sobic001G038300 Sobic003G427700--Sobic001G038300 Sobic002G247800 Sobic002G247800 Sobic003G427700--Sobic002G247800 Sobic010G159100 Sobic010G159100 Sobic003G427700--Sobic010G159100 Sobic004G170800 Sobic004G170800 Sobic005G142500--Sobic004G170800 Sobic004G050700 Sobic004G050700 Sobic005G142500--Sobic004G050700 Sobic005G142500--Sobic001G264300 Sobic001G264400 Sobic001G264400 Sobic005G142500--Sobic001G264400 Sobic005G142500--Sobic003G427700 Sobic005G142500--Sobic005G051600 Sobic005G142500--Sobic002G247800 Sobic009G221800 Sobic009G221800 Sobic005G142500--Sobic009G221800 Sobic009G130300 Sobic009G130300 Sobic005G142500--Sobic009G130300 Sobic002G233500 Sobic002G233500 Sobic005G004700--Sobic002G233500 Sobic003G117500 Sobic003G117500 Sobic005G004700--Sobic003G117500 Sobic002G173200 Sobic002G173200 Sobic005G004700--Sobic002G173200 Sobic005G004700--Sobic003G427700 Sobic001G475500 Sobic001G475500 Sobic005G004700--Sobic001G475500 Sobic008G110200 Sobic008G110200 Sobic005G004700--Sobic008G110200 Sobic004G030300 Sobic004G030300 Sobic005G004700--Sobic004G030300 Sobic001G481000 Sobic001G481000 Sobic005G004700--Sobic001G481000 Sobic005G004700--Sobic001G038300 Sobic005G130550 Sobic005G130550 Sobic005G051600--Sobic005G130550 Sobic005G051600--Sobic005G142500 Sobic005G051600--Sobic001G264400 Sobic004G297950 Sobic004G297950 Sobic005G051600--Sobic004G297950 Sobic005G051600--Sobic003G427700 Sobic005G130600 Sobic005G130600 Sobic005G051600--Sobic005G130600 Sobic007G021000 Sobic007G021000 Sobic005G051600--Sobic007G021000 Sobic003G321400 Sobic003G321400 Sobic005G051600--Sobic003G321400 Sobic004G170900 Sobic004G170900 Sobic005G051600--Sobic004G170900 Sobic002G251100 Sobic002G251100 Sobic001G470100--Sobic002G251100 Sobic005G047100 Sobic005G047100 Sobic001G470100--Sobic005G047100 Sobic001G470100--Sobic001G038300 Sobic001G156500 Sobic001G156500 Sobic001G470100--Sobic001G156500 Sobic001G470100--Sobic002G247800 Sobic007G150800 Sobic007G150800 Sobic001G470100--Sobic007G150800 Sobic004G285900 Sobic004G285900 Sobic001G470100--Sobic004G285900 Sobic001G261549 Sobic001G261549 Sobic001G470100--Sobic001G261549 Sobic001G107200 Sobic001G107200 Sobic001G470100--Sobic001G107200 Sobic001G264300--Sobic009G221800 Sobic001G264300--Sobic003G321400 Sobic010G047600 Sobic010G047600 Sobic001G264300--Sobic010G047600 Sobic001G264300--Sobic001G264400 Sobic001G264300--Sobic004G050700 Sobic003G078900 Sobic003G078900 Sobic001G264300--Sobic003G078900 Sobic001G514200 Sobic001G514200 Sobic001G264300--Sobic001G514200 Sobic001G264300--Sobic004G170800 Sobic001G261460 Sobic001G261460 Sobic001G264300--Sobic001G261460 Sobic002G254300 Sobic002G254300 Sobic007G213400--Sobic002G254300 Sobic007G213400--Sobic005G004700 Sobic007G213400--Sobic003G427700 Sobic007G213400--Sobic001G481000 Sobic007G213400--Sobic003G117500 Sobic001G316800 Sobic001G316800 Sobic007G213400--Sobic001G316800 Sobic007G213400--Sobic001G475500 Sobic007G213400--Sobic008G110200 Sobic007G213400--Sobic002G251100 Sobic002G396400 Sobic002G396400 Sobic001G038300--Sobic002G396400 Sobic001G107100 Sobic001G107100 Sobic001G038300--Sobic001G107100 Sobic003G250700 Sobic003G250700 Sobic001G038300--Sobic003G250700 Sobic001G418100 Sobic001G418100 Sobic001G038300--Sobic001G418100 Sobic001G038300--Sobic010G047600 Sobic001G434300 Sobic001G434300 Sobic001G038300--Sobic001G434300 Sobic001G038300--Sobic001G475500 Sobic001G038300--Sobic007G150800 Sobic003G122200 Sobic003G122200 Sobic001G038300--Sobic003G122200 Sobic007G225400 Sobic007G225400 Sobic002G247800--Sobic007G225400 Sobic002G179150 Sobic002G179150 Sobic002G247800--Sobic002G179150 Sobic002G247800--Sobic004G170900 Sobic002G247800--Sobic001G470100 Sobic002G247800--Sobic005G142500 Sobic002G247800--Sobic004G285900 Sobic001G030400 Sobic001G030400 Sobic002G247800--Sobic001G030400 Sobic002G247800--Sobic010G159100 Sobic003G011100 Sobic003G011100 Sobic002G247800--Sobic003G011100 Sobic002G241500 Sobic002G241500 Sobic010G159100--Sobic002G241500 Sobic010G001800 Sobic010G001800 Sobic010G159100--Sobic010G001800 Sobic010G159100--Sobic002G247800 Sobic010G159100--Sobic004G285900 Sobic001G389300 Sobic001G389300 Sobic010G159100--Sobic001G389300 Sobic001G108400 Sobic001G108400 Sobic010G159100--Sobic001G108400 Sobic010G159100--Sobic007G225400 Sobic007G214700 Sobic007G214700 Sobic010G159100--Sobic007G214700 Sobic010G159100--Sobic002G179150
Octagon: transcription factors


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