Gene annotation
Transcriptome id Sobic.010G167800.1
Synonym Sb10g022080
Functional annotation MATE domain containing protein, expressed
UniProt A0A1W0VTG2
Pfam PF01554
Panther DB PTHR11206 PTHR11206:SF76
NCBI CDD KOG1347; Uncharacterized membrane protein, predicted efflux pump
KEGG Orthology K03327; TC.MATE, SLC47A, norM, mdtK, multidrug resistance protein, MATE family
Gene Ontology GO:0016020; membrane GO:0015297antiporter activity GO:0006855drug transmembrane transport


Orthologs (automatic annotation)
TAIR AT4G29140 : MATE efflux family protein
RAP-DB (Rice) LOC_Os06g36330.1 : MATE domain containing protein, expressed
MaizeGDB (Corn) Zm00025a051040
Brachypodium KQK17997 , KQK00755
Barley HORVU0Hr1G025760.4 , HORVU0Hr1G025760.5 , HORVU0Hr1G025760.2 , HORVU0Hr1G025760.3 , HORVU0Hr1G025760.1 , HORVU6Hr1G065390.1 , HORVU6Hr1G065390.3 , HORVU6Hr1G065390.2 , HORVU6Hr1G065390.5 , HORVU6Hr1G065390.4 , HORVU0Hr1G021690.2 , HORVU0Hr1G021690.1 , HORVU5Hr1G080470.1
Wheat -
Populus -


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Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.010G221300 expressed protein -
2 Sobic.001G304300 LTPL138 - Protease inhibitor/seed storage/LTP family protein precursor, expressed -
3 Sobic.009G031900 MYB family transcription factor, putative, expressed K09422: transcription factor MYB, plant
4 Sobic.003G321200 pectinesterase, putative, expressed K01051: pectinesterase
5 Sobic.001G004800 receptor protein kinase, putative, expressed -
6 Sobic.005G142500 plant protein of unknown function domain containing protein, expressed -
7 Sobic.009G248100 SAG (Senescence-associated gene): up-regulated gene during dark-induced senescence.(PubMedID : 27586543)@expressed protein -
8 Sobic.003G027400 VQ domain containing protein, putative, expressed -
9 Sobic.003G357300 MYB family transcription factor, putative, expressed K09422: transcription factor MYB, plant
10 Sobic.001G481000 expressed protein -
11 Sobic.006G195600 expressed protein K14376: poly(A) polymerase
12 Sobic.003G427700 expressed protein -
13 Sobic.003G321101 - -
14 Sobic.003G117500 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@RALFL9 - Rapid ALkalinization Factor RALF family protein precursor, expressed -
15 Sobic.002G350500 AP2 domain containing protein, expressed K09286: EREBP-like factor
16 Sobic.004G203700 ubiquitin family protein, putative, expressed -
17 Sobic.001G031700 nucleobase-ascorbate transporter, putative, expressed -
18 Sobic.006G045500 OsFBO3 - F-box and other domain containing protein, expressed -
19 Sobic.004G301300 zinc finger, C3HC4 type domain containing protein, expressed -
20 Sobic.001G393500 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@Ca2+ sensors group(PubMedID : 30367619)@EF hand family protein, putative, expressed K02183: calmodulin


Gene co-expression network
sample Sobic010G167800 Sobic010G167800 Sobic010G221300 Sobic010G221300 Sobic010G167800--Sobic010G221300 Sobic001G304300 Sobic001G304300 Sobic010G167800--Sobic001G304300 Sobic009G031900 Sobic009G031900 Sobic010G167800--Sobic009G031900 Sobic003G321200 Sobic003G321200 Sobic010G167800--Sobic003G321200 Sobic001G004800 Sobic001G004800 Sobic010G167800--Sobic001G004800 Sobic005G142500 Sobic005G142500 Sobic010G167800--Sobic005G142500 Sobic009G248100 Sobic009G248100 Sobic010G167800--Sobic009G248100 Sobic003G027400 Sobic003G027400 Sobic010G167800--Sobic003G027400 Sobic003G357300 Sobic003G357300 Sobic010G167800--Sobic003G357300 Sobic006G191800 Sobic006G191800 Sobic010G221300--Sobic006G191800 Sobic004G041900 Sobic004G041900 Sobic010G221300--Sobic004G041900 Sobic001G031700 Sobic001G031700 Sobic010G221300--Sobic001G031700 Sobic010G047100 Sobic010G047100 Sobic010G221300--Sobic010G047100 Sobic003G160700 Sobic003G160700 Sobic010G221300--Sobic003G160700 Sobic003G125650 Sobic003G125650 Sobic010G221300--Sobic003G125650 Sobic004G203700 Sobic004G203700 Sobic010G221300--Sobic004G203700 Sobic009G184000 Sobic009G184000 Sobic010G221300--Sobic009G184000 Sobic002G387900 Sobic002G387900 Sobic010G221300--Sobic002G387900 Sobic001G304300--Sobic003G321200 Sobic001G304300--Sobic009G248100 Sobic001G304300--Sobic001G004800 Sobic002G201600 Sobic002G201600 Sobic001G304300--Sobic002G201600 Sobic004G266200 Sobic004G266200 Sobic001G304300--Sobic004G266200 Sobic006G190600 Sobic006G190600 Sobic001G304300--Sobic006G190600 Sobic001G481000 Sobic001G481000 Sobic001G304300--Sobic001G481000 Sobic003G417800 Sobic003G417800 Sobic001G304300--Sobic003G417800 Sobic001G304300--Sobic005G142500 Sobic003G148300 Sobic003G148300 Sobic009G031900--Sobic003G148300 Sobic005G099000 Sobic005G099000 Sobic009G031900--Sobic005G099000 Sobic003G116800 Sobic003G116800 Sobic009G031900--Sobic003G116800 Sobic001G169500 Sobic001G169500 Sobic009G031900--Sobic001G169500 Sobic009G189501 Sobic009G189501 Sobic009G031900--Sobic009G189501 Sobic008G186100 Sobic008G186100 Sobic009G031900--Sobic008G186100 Sobic005G011300 Sobic005G011300 Sobic009G031900--Sobic005G011300 Sobic004G086400 Sobic004G086400 Sobic009G031900--Sobic004G086400 Sobic003G432700 Sobic003G432700 Sobic009G031900--Sobic003G432700 Sobic003G321200--Sobic001G481000 Sobic001G435000 Sobic001G435000 Sobic003G321200--Sobic001G435000 Sobic003G321200--Sobic003G417800 Sobic006G092500 Sobic006G092500 Sobic003G321200--Sobic006G092500 Sobic003G321200--Sobic003G027400 Sobic010G259600 Sobic010G259600 Sobic003G321200--Sobic010G259600 Sobic004G166700 Sobic004G166700 Sobic003G321200--Sobic004G166700 Sobic004G100700 Sobic004G100700 Sobic003G321200--Sobic004G100700 Sobic003G321200--Sobic005G099000 Sobic001G004800--Sobic004G203700 Sobic002G353800 Sobic002G353800 Sobic001G004800--Sobic002G353800 Sobic006G137800 Sobic006G137800 Sobic001G004800--Sobic006G137800 Sobic001G313200 Sobic001G313200 Sobic001G004800--Sobic001G313200 Sobic002G389400 Sobic002G389400 Sobic001G004800--Sobic002G389400 Sobic001G112200 Sobic001G112200 Sobic001G004800--Sobic001G112200 Sobic004G301300 Sobic004G301300 Sobic001G004800--Sobic004G301300 Sobic001G529400 Sobic001G529400 Sobic001G004800--Sobic001G529400 Sobic002G055700 Sobic002G055700 Sobic001G004800--Sobic002G055700 Sobic004G170800 Sobic004G170800 Sobic005G142500--Sobic004G170800 Sobic004G050700 Sobic004G050700 Sobic005G142500--Sobic004G050700 Sobic001G264300 Sobic001G264300 Sobic005G142500--Sobic001G264300 Sobic001G264400 Sobic001G264400 Sobic005G142500--Sobic001G264400 Sobic003G427700 Sobic003G427700 Sobic005G142500--Sobic003G427700 Sobic005G051600 Sobic005G051600 Sobic005G142500--Sobic005G051600 Sobic002G247800 Sobic002G247800 Sobic005G142500--Sobic002G247800 Sobic009G221800 Sobic009G221800 Sobic005G142500--Sobic009G221800 Sobic009G130300 Sobic009G130300 Sobic005G142500--Sobic009G130300 Sobic009G248100--Sobic003G027400 Sobic009G248100--Sobic003G321200 Sobic001G325400 Sobic001G325400 Sobic009G248100--Sobic001G325400 Sobic009G035200 Sobic009G035200 Sobic009G248100--Sobic009G035200 Sobic009G229000 Sobic009G229000 Sobic009G248100--Sobic009G229000 Sobic003G117600 Sobic003G117600 Sobic009G248100--Sobic003G117600 Sobic009G248100--Sobic006G092500 Sobic009G111000 Sobic009G111000 Sobic009G248100--Sobic009G111000 Sobic006G039100 Sobic006G039100 Sobic009G248100--Sobic006G039100 Sobic003G027400--Sobic003G160700 Sobic006G249300 Sobic006G249300 Sobic003G027400--Sobic006G249300 Sobic003G027400--Sobic009G248100 Sobic003G027400--Sobic010G221300 Sobic003G027400--Sobic001G481000 Sobic005G113300 Sobic005G113300 Sobic003G027400--Sobic005G113300 Sobic003G027400--Sobic002G387900 Sobic003G084400 Sobic003G084400 Sobic003G027400--Sobic003G084400 Sobic002G200600 Sobic002G200600 Sobic003G027400--Sobic002G200600 Sobic004G301000 Sobic004G301000 Sobic003G357300--Sobic004G301000 Sobic003G357300--Sobic004G100700 Sobic003G393900 Sobic003G393900 Sobic003G357300--Sobic003G393900 Sobic001G108200 Sobic001G108200 Sobic003G357300--Sobic001G108200 Sobic004G306300 Sobic004G306300 Sobic003G357300--Sobic004G306300 Sobic006G275200 Sobic006G275200 Sobic003G357300--Sobic006G275200 Sobic009G070400 Sobic009G070400 Sobic003G357300--Sobic009G070400 Sobic002G393000 Sobic002G393000 Sobic003G357300--Sobic002G393000 Sobic001G308300 Sobic001G308300 Sobic003G357300--Sobic001G308300
Octagon: transcription factors


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