Gene annotation
Transcriptome id Sobic.007G213400.1,Sobic.007G213400.2
Synonym Sb07g028060
Functional annotation SAG (Senescence-associated gene): up-regulated gene during salt-induced senescence. (PubMedID : 27586543)
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UniProt A0A1B6PIX1 , A0A1B6PJ24
Pfam -
Panther DB -
NCBI CDD -
KEGG Orthology -
Gene Ontology -


Orthologs (automatic annotation)
TAIR -
RAP-DB (Rice) -
MaizeGDB (Corn) -
Brachypodium -
Barley -
Wheat -
Populus -


JBrowse

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cDNA sequences
Sobic.007G213400


Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.002G254300 expressed protein -
2 Sobic.005G004700 "domain confirmed by Pfam database, expressed in leaf and root, expression induced by BR treatment"(PubMedID : 20499123)@DUF260 domain containing protein, putative, expressed -
3 Sobic.003G427700 expressed protein -
4 Sobic.001G481000 expressed protein -
5 Sobic.003G117500 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@RALFL9 - Rapid ALkalinization Factor RALF family protein precursor, expressed -
6 Sobic.001G316800 no apical meristem protein, putative, expressed -
7 Sobic.001G475500 ras-related protein, putative, expressed K07904: Ras-related protein Rab-11A
8 Sobic.008G110200 OsWLIM1 - LIM domain protein, putative actin-binding protein and transcription factor, expressed K09377: cysteine and glycine-rich protein
9 Sobic.002G251100 ternary complex factor MIP1, putative, expressed -
10 Sobic.005G142500 plant protein of unknown function domain containing protein, expressed -
11 Sobic.003G408900 transferase family protein, putative, expressed K15400: omega-hydroxypalmitate O-feruloyl transferase
12 Sobic.001G470100 OsFBX77 - F-box domain containing protein, expressed -
13 Sobic.003G027400 VQ domain containing protein, putative, expressed -
14 Sobic.007G225400 phosphate-induced protein 1 conserved region domain containing protein, expressed -
15 Sobic.004G252800 SAG (Senescence-associated gene): up-regulated gene during dark-induced senescence.(PubMedID : 27586543)@zinc finger, C3HC4 type domain containing protein, expressed -
16 Sobic.001G264300 hsp20/alpha crystallin family protein, putative, expressed -
17 Sobic.001G295800 expressed protein -
18 Sobic.009G130300 AWPM-19-like membrane family protein, putative, expressed -
19 Sobic.004G030300 expressed protein -
20 Sobic.003G122200 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence./late senescence marker during developmental senescence(PubMedID : 27586543)@ADP-ribosylation factor, putative, expressed K07937: ADP-ribosylation factor 1/2
K07977: Arf/Sar family, other


Gene co-expression network
sample Sobic007G213400 Sobic007G213400 Sobic002G254300 Sobic002G254300 Sobic007G213400--Sobic002G254300 Sobic005G004700 Sobic005G004700 Sobic007G213400--Sobic005G004700 Sobic003G427700 Sobic003G427700 Sobic007G213400--Sobic003G427700 Sobic001G481000 Sobic001G481000 Sobic007G213400--Sobic001G481000 Sobic003G117500 Sobic003G117500 Sobic007G213400--Sobic003G117500 Sobic001G316800 Sobic001G316800 Sobic007G213400--Sobic001G316800 Sobic001G475500 Sobic001G475500 Sobic007G213400--Sobic001G475500 Sobic008G110200 Sobic008G110200 Sobic007G213400--Sobic008G110200 Sobic002G251100 Sobic002G251100 Sobic007G213400--Sobic002G251100 Sobic002G247800 Sobic002G247800 Sobic002G254300--Sobic002G247800 Sobic002G254300--Sobic007G213400 Sobic002G179150 Sobic002G179150 Sobic002G254300--Sobic002G179150 Sobic003G174700 Sobic003G174700 Sobic002G254300--Sobic003G174700 Sobic001G030400 Sobic001G030400 Sobic002G254300--Sobic001G030400 Sobic003G000700 Sobic003G000700 Sobic002G254300--Sobic003G000700 Sobic002G254300--Sobic003G117500 Sobic010G091600 Sobic010G091600 Sobic002G254300--Sobic010G091600 Sobic002G254300--Sobic001G475500 Sobic002G233500 Sobic002G233500 Sobic005G004700--Sobic002G233500 Sobic005G004700--Sobic003G117500 Sobic002G173200 Sobic002G173200 Sobic005G004700--Sobic002G173200 Sobic005G004700--Sobic003G427700 Sobic005G004700--Sobic001G475500 Sobic005G004700--Sobic008G110200 Sobic004G030300 Sobic004G030300 Sobic005G004700--Sobic004G030300 Sobic005G004700--Sobic001G481000 Sobic001G038300 Sobic001G038300 Sobic005G004700--Sobic001G038300 Sobic005G142500 Sobic005G142500 Sobic003G427700--Sobic005G142500 Sobic003G427700--Sobic005G004700 Sobic005G051600 Sobic005G051600 Sobic003G427700--Sobic005G051600 Sobic001G470100 Sobic001G470100 Sobic003G427700--Sobic001G470100 Sobic001G264300 Sobic001G264300 Sobic003G427700--Sobic001G264300 Sobic003G427700--Sobic007G213400 Sobic003G427700--Sobic001G038300 Sobic003G427700--Sobic002G247800 Sobic010G159100 Sobic010G159100 Sobic003G427700--Sobic010G159100 Sobic001G304100 Sobic001G304100 Sobic001G481000--Sobic001G304100 Sobic001G310300 Sobic001G310300 Sobic001G481000--Sobic001G310300 Sobic010G184800 Sobic010G184800 Sobic001G481000--Sobic010G184800 Sobic004G203700 Sobic004G203700 Sobic001G481000--Sobic004G203700 Sobic009G188000 Sobic009G188000 Sobic001G481000--Sobic009G188000 Sobic003G027400 Sobic003G027400 Sobic001G481000--Sobic003G027400 Sobic003G321200 Sobic003G321200 Sobic001G481000--Sobic003G321200 Sobic002G213600 Sobic002G213600 Sobic001G481000--Sobic002G213600 Sobic003G160700 Sobic003G160700 Sobic001G481000--Sobic003G160700 Sobic003G117500--Sobic001G475500 Sobic003G117500--Sobic003G027400 Sobic003G117500--Sobic001G481000 Sobic003G117500--Sobic001G310300 Sobic007G150800 Sobic007G150800 Sobic003G117500--Sobic007G150800 Sobic001G434300 Sobic001G434300 Sobic003G117500--Sobic001G434300 Sobic003G219800 Sobic003G219800 Sobic003G117500--Sobic003G219800 Sobic002G350500 Sobic002G350500 Sobic003G117500--Sobic002G350500 Sobic001G502900 Sobic001G502900 Sobic003G117500--Sobic001G502900 Sobic001G307800 Sobic001G307800 Sobic001G316800--Sobic001G307800 Sobic002G280300 Sobic002G280300 Sobic001G316800--Sobic002G280300 Sobic004G170800 Sobic004G170800 Sobic001G316800--Sobic004G170800 Sobic007G225400 Sobic007G225400 Sobic001G316800--Sobic007G225400 Sobic001G316800--Sobic005G142500 Sobic001G514300 Sobic001G514300 Sobic001G316800--Sobic001G514300 Sobic001G264400 Sobic001G264400 Sobic001G316800--Sobic001G264400 Sobic008G099100 Sobic008G099100 Sobic001G316800--Sobic008G099100 Sobic005G088300 Sobic005G088300 Sobic001G316800--Sobic005G088300 Sobic001G475500--Sobic001G502900 Sobic001G475500--Sobic003G160700 Sobic003G122200 Sobic003G122200 Sobic001G475500--Sobic003G122200 Sobic005G113300 Sobic005G113300 Sobic001G475500--Sobic005G113300 Sobic001G475500--Sobic007G150800 Sobic009G173500 Sobic009G173500 Sobic001G475500--Sobic009G173500 Sobic001G361600 Sobic001G361600 Sobic001G475500--Sobic001G361600 Sobic004G220000 Sobic004G220000 Sobic001G475500--Sobic004G220000 Sobic001G475500--Sobic003G117500 Sobic004G221300 Sobic004G221300 Sobic008G110200--Sobic004G221300 Sobic001G409100 Sobic001G409100 Sobic008G110200--Sobic001G409100 Sobic008G110200--Sobic001G038300 Sobic010G180100 Sobic010G180100 Sobic008G110200--Sobic010G180100 Sobic009G048000 Sobic009G048000 Sobic008G110200--Sobic009G048000 Sobic006G148800 Sobic006G148800 Sobic008G110200--Sobic006G148800 Sobic001G418100 Sobic001G418100 Sobic008G110200--Sobic001G418100 Sobic008G141200 Sobic008G141200 Sobic008G110200--Sobic008G141200 Sobic009G016100 Sobic009G016100 Sobic008G110200--Sobic009G016100 Sobic002G251100--Sobic001G470100 Sobic002G251100--Sobic001G038300 Sobic002G333800 Sobic002G333800 Sobic002G251100--Sobic002G333800 Sobic004G285900 Sobic004G285900 Sobic002G251100--Sobic004G285900 Sobic001G531300 Sobic001G531300 Sobic002G251100--Sobic001G531300 Sobic002G251100--Sobic001G475500 Sobic003G034600 Sobic003G034600 Sobic002G251100--Sobic003G034600 Sobic001G156500 Sobic001G156500 Sobic002G251100--Sobic001G156500 Sobic009G181800 Sobic009G181800 Sobic002G251100--Sobic009G181800
Octagon: transcription factors


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