Gene annotation
Transcriptome id Sobic.001G108400.1
Synonym Sb01g009670
Functional annotation LRR receptor-like protein kinase, putative, expressed
UniProt C5WM39
Pfam PF13855 PF07714
Panther DB PTHR27001 PTHR27001:SF237
NCBI CDD KOG1187; Serine/threonine protein kinase
KEGG Orthology -
Gene Ontology GO:0005515; protein binding GO:0006468protein phosphorylation GO:0004672protein kinase activity


Orthologs (automatic annotation)
TAIR AT2G16250 : Leucine-rich repeat protein kinase family protein
RAP-DB (Rice) LOC_Os03g51440.1 : LRR receptor-like protein kinase, putative, expressed
MaizeGDB (Corn) Zm00025a007952 , Zm00025a016904
Brachypodium KQK13458
Barley HORVU4Hr1G009340.2 , HORVU4Hr1G009340.1 , HORVU4Hr1G009340.4 , HORVU4Hr1G009340.5
Wheat TraesCS4D02G055900 , TraesCS4A02G259100 , TraesCS4B02G055600
Populus -


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Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.007G044400 MSP domain containing protein, expressed -
2 Sobic.003G410600 exostosin family domain containing protein, expressed -
3 Sobic.002G313600 src homology-3 domain protein 3, putative, expressed -
4 Sobic.009G001200 zinc finger, C3HC4 type domain containing protein, expressed K10638: UHRF1, E3 ubiquitin-protein ligase UHRF1
5 Sobic.001G404700 protein kinase, putative, expressed -
6 Sobic.006G207400 expressed protein -
7 Sobic.003G017500 TTL1, putative, expressed -
8 Sobic.001G169800 cyclin, putative, expressed K06627: cyclin-A
9 Sobic.001G026600 - -
10 Sobic.004G197400 expressed protein K00558: DNMT1, DNA (cytosine-5)-methyltransferase 1
11 Sobic.006G140100 TMS membrane protein/tumour differentially expressed protein, putative, expressed -
12 Sobic.002G146601 - -
13 Sobic.010G001800 DNA-binding protein-related, putative, expressed K07466: RFA1, RPA1, replication factor A1
14 Sobic.001G528600 remorin family protein, putative, expressed -
15 Sobic.003G135400 tubulin/FtsZ domain containing protein, putative, expressed K07375: tubulin beta
16 Sobic.006G189200 ubiquitin-conjugating enzyme, putative, expressed K10577: UBE2I, ubiquitin-conjugating enzyme E2 I
17 Sobic.001G436100 UDP-glucuronate 4-epimerase, putative, expressed K08679: UDP-glucuronate 4-epimerase
18 Sobic.006G116500 expressed protein -
19 Sobic.003G289800 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@serine/threonine-protein kinase, putative, expressed -
20 Sobic.001G051300 BEE 1, putative, expressed -


Gene co-expression network
sample Sobic001G108400 Sobic001G108400 Sobic007G044400 Sobic007G044400 Sobic001G108400--Sobic007G044400 Sobic003G410600 Sobic003G410600 Sobic001G108400--Sobic003G410600 Sobic002G313600 Sobic002G313600 Sobic001G108400--Sobic002G313600 Sobic009G001200 Sobic009G001200 Sobic001G108400--Sobic009G001200 Sobic001G404700 Sobic001G404700 Sobic001G108400--Sobic001G404700 Sobic006G207400 Sobic006G207400 Sobic001G108400--Sobic006G207400 Sobic003G017500 Sobic003G017500 Sobic001G108400--Sobic003G017500 Sobic001G169800 Sobic001G169800 Sobic001G108400--Sobic001G169800 Sobic001G026600 Sobic001G026600 Sobic001G108400--Sobic001G026600 Sobic001G196100 Sobic001G196100 Sobic007G044400--Sobic001G196100 Sobic009G189200 Sobic009G189200 Sobic007G044400--Sobic009G189200 Sobic001G116000 Sobic001G116000 Sobic007G044400--Sobic001G116000 Sobic007G044400--Sobic001G026600 Sobic007G044400--Sobic002G313600 Sobic006G102900 Sobic006G102900 Sobic007G044400--Sobic006G102900 Sobic009G059500 Sobic009G059500 Sobic007G044400--Sobic009G059500 Sobic002G186900 Sobic002G186900 Sobic007G044400--Sobic002G186900 Sobic007G183800 Sobic007G183800 Sobic007G044400--Sobic007G183800 Sobic003G294500 Sobic003G294500 Sobic003G410600--Sobic003G294500 Sobic003G013000 Sobic003G013000 Sobic003G410600--Sobic003G013000 Sobic005G144600 Sobic005G144600 Sobic003G410600--Sobic005G144600 Sobic001G177900 Sobic001G177900 Sobic003G410600--Sobic001G177900 Sobic003G135400 Sobic003G135400 Sobic003G410600--Sobic003G135400 Sobic003G314900 Sobic003G314900 Sobic003G410600--Sobic003G314900 Sobic007G168900 Sobic007G168900 Sobic003G410600--Sobic007G168900 Sobic010G008900 Sobic010G008900 Sobic003G410600--Sobic010G008900 Sobic001G029800 Sobic001G029800 Sobic003G410600--Sobic001G029800 Sobic002G313600--Sobic001G116000 Sobic002G313600--Sobic007G044400 Sobic002G313600--Sobic001G196100 Sobic003G134800 Sobic003G134800 Sobic002G313600--Sobic003G134800 Sobic002G313600--Sobic001G026600 Sobic002G313600--Sobic001G108400 Sobic001G530800 Sobic001G530800 Sobic002G313600--Sobic001G530800 Sobic001G281900 Sobic001G281900 Sobic002G313600--Sobic001G281900 Sobic002G313600--Sobic003G017500 Sobic009G001200--Sobic003G410600 Sobic003G345200 Sobic003G345200 Sobic009G001200--Sobic003G345200 Sobic009G001200--Sobic001G108400 Sobic004G119700 Sobic004G119700 Sobic009G001200--Sobic004G119700 Sobic002G161700 Sobic002G161700 Sobic009G001200--Sobic002G161700 Sobic010G003100 Sobic010G003100 Sobic009G001200--Sobic010G003100 Sobic004G197400 Sobic004G197400 Sobic009G001200--Sobic004G197400 Sobic001G122100 Sobic001G122100 Sobic009G001200--Sobic001G122100 Sobic001G051300 Sobic001G051300 Sobic009G001200--Sobic001G051300 Sobic006G189200 Sobic006G189200 Sobic001G404700--Sobic006G189200 Sobic001G404700--Sobic001G108400 Sobic003G412800 Sobic003G412800 Sobic001G404700--Sobic003G412800 Sobic010G079100 Sobic010G079100 Sobic001G404700--Sobic010G079100 Sobic004G208100 Sobic004G208100 Sobic001G404700--Sobic004G208100 Sobic004G309800 Sobic004G309800 Sobic001G404700--Sobic004G309800 Sobic003G230000 Sobic003G230000 Sobic001G404700--Sobic003G230000 Sobic002G151400 Sobic002G151400 Sobic001G404700--Sobic002G151400 Sobic002G230800 Sobic002G230800 Sobic001G404700--Sobic002G230800 Sobic006G207400--Sobic004G309800 Sobic001G231200 Sobic001G231200 Sobic006G207400--Sobic001G231200 Sobic008G096200 Sobic008G096200 Sobic006G207400--Sobic008G096200 Sobic007G094400 Sobic007G094400 Sobic006G207400--Sobic007G094400 Sobic001G261549 Sobic001G261549 Sobic006G207400--Sobic001G261549 Sobic006G207400--Sobic003G230000 Sobic001G487200 Sobic001G487200 Sobic006G207400--Sobic001G487200 Sobic006G207400--Sobic001G108400 Sobic007G166800 Sobic007G166800 Sobic006G207400--Sobic007G166800 Sobic002G383100 Sobic002G383100 Sobic003G017500--Sobic002G383100 Sobic003G017500--Sobic001G051300 Sobic007G130900 Sobic007G130900 Sobic003G017500--Sobic007G130900 Sobic001G437500 Sobic001G437500 Sobic003G017500--Sobic001G437500 Sobic007G139500 Sobic007G139500 Sobic003G017500--Sobic007G139500 Sobic009G073400 Sobic009G073400 Sobic003G017500--Sobic009G073400 Sobic009G206500 Sobic009G206500 Sobic003G017500--Sobic009G206500 Sobic001G159800 Sobic001G159800 Sobic003G017500--Sobic001G159800 Sobic003G017500--Sobic003G410600 Sobic001G456500 Sobic001G456500 Sobic001G169800--Sobic001G456500 Sobic006G116500 Sobic006G116500 Sobic001G169800--Sobic006G116500 Sobic003G444300 Sobic003G444300 Sobic001G169800--Sobic003G444300 Sobic001G083300 Sobic001G083300 Sobic001G169800--Sobic001G083300 Sobic002G223900 Sobic002G223900 Sobic001G169800--Sobic002G223900 Sobic003G183700 Sobic003G183700 Sobic001G169800--Sobic003G183700 Sobic001G105800 Sobic001G105800 Sobic001G169800--Sobic001G105800 Sobic004G355500 Sobic004G355500 Sobic001G169800--Sobic004G355500 Sobic003G179500 Sobic003G179500 Sobic001G169800--Sobic003G179500 Sobic001G026600--Sobic001G530800 Sobic001G026600--Sobic007G044400 Sobic010G277000 Sobic010G277000 Sobic001G026600--Sobic010G277000 Sobic001G026600--Sobic001G196100 Sobic001G026600--Sobic001G116000 Sobic008G084100 Sobic008G084100 Sobic001G026600--Sobic008G084100 Sobic003G319000 Sobic003G319000 Sobic001G026600--Sobic003G319000 Sobic001G026600--Sobic002G313600 Sobic001G436100 Sobic001G436100 Sobic001G026600--Sobic001G436100
Octagon: transcription factors


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