Gene annotation
Transcriptome id Sobic.001G429000.1
Synonym Sb01g040310
Functional annotation harpin-induced protein 1 domain containing protein, expressed
UniProt C5WQ70
Pfam PF03168
Panther DB PTHR31234 PTHR31234:SF8
NCBI CDD -
KEGG Orthology -
Gene Ontology -


Orthologs (automatic annotation)
TAIR AT2G01080 : Late embryogenesis abundant (LEA) hydroxyproline-rich glycoprotein family
RAP-DB (Rice) LOC_Os03g15630.1 : harpin-induced protein 1 domain containing protein, expressed
MaizeGDB (Corn) Zm00025a001698 , Zm00025a052817
Brachypodium KQK22465
Barley -
Wheat TraesCS4B02G216100 , TraesCS4D02G216700 , TraesCS4A02G088200
Populus -


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Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.001G429500 phosphatidylinositol-4-phosphate 5-kinase, putative, expressed -
2 Sobic.001G399300 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@protein phosphotase protein, putative, expressed -
3 Sobic.009G165500 Lung seven transmembrane receptor domain containing protein, putative, expressed -
4 Sobic.009G157600 DUF740 domain containing protein, expressed -
5 Sobic.006G200000 RNA recognition motif, putative, expressed -
6 Sobic.001G505000 cyclin-dependent kinases regulatory subunit 1, putative, expressed K02219: cyclin-dependent kinase regulatory subunit CKS1
7 Sobic.001G261549 - -
8 Sobic.003G423000 SAG (Senescence-associated gene): up-regulated gene during salt-induced senescence.(PubMedID : 27586543)@WD domain, G-beta repeat domain containing protein, expressed -
9 Sobic.009G194900 glucan endo-1,3-beta-glucosidase-like protein 3 precursor, putative, expressed -
10 Sobic.003G034600 CAMK_CAMK_like_Aur_like.1 - CAMK includes calcium/calmodulin depedent protein kinases, expressed K08850: aurora kinase, other
11 Sobic.006G149200 LSM domain containing protein, expressed K11096: SNRPD2, small nuclear ribonucleoprotein D2
12 Sobic.003G084300 mediator of RNA polymerase II transcription subunit 22, putative, expressed K15139: mediator of RNA polymerase II transcription subunit 22
13 Sobic.002G128800 fiber protein Fb34, putative, expressed -
14 Sobic.003G279100 mitochondrial ATP synthase g subunit family protein, putative, expressed K02140: ATPeFG, ATP5L, F-type H+-transporting ATPase subunit g
15 Sobic.003G297200 lipase, putative, expressed -
16 Sobic.004G217450 - -
17 Sobic.006G102900 expressed protein -
18 Sobic.006G013900 RNA polymerase subunit, putative, expressed K03008: RPB11, DNA-directed RNA polymerase II subunit RPB11
19 Sobic.003G107200 SNF7 domain containing protein, putative, expressed K12198: CHMP5, charged multivesicular body protein 5
20 Sobic.005G080900 expressed protein -


Gene co-expression network
sample Sobic001G429000 Sobic001G429000 Sobic001G429500 Sobic001G429500 Sobic001G429000--Sobic001G429500 Sobic001G399300 Sobic001G399300 Sobic001G429000--Sobic001G399300 Sobic009G165500 Sobic009G165500 Sobic001G429000--Sobic009G165500 Sobic009G157600 Sobic009G157600 Sobic001G429000--Sobic009G157600 Sobic006G200000 Sobic006G200000 Sobic001G429000--Sobic006G200000 Sobic001G505000 Sobic001G505000 Sobic001G429000--Sobic001G505000 Sobic001G261549 Sobic001G261549 Sobic001G429000--Sobic001G261549 Sobic003G423000 Sobic003G423000 Sobic001G429000--Sobic003G423000 Sobic009G194900 Sobic009G194900 Sobic001G429000--Sobic009G194900 Sobic001G429500--Sobic001G429000 Sobic001G429500--Sobic001G399300 Sobic003G379600 Sobic003G379600 Sobic001G429500--Sobic003G379600 Sobic004G217450 Sobic004G217450 Sobic001G429500--Sobic004G217450 Sobic007G195800 Sobic007G195800 Sobic001G429500--Sobic007G195800 Sobic004G285900 Sobic004G285900 Sobic001G429500--Sobic004G285900 Sobic001G429500--Sobic001G505000 Sobic001G429500--Sobic001G261549 Sobic004G345500 Sobic004G345500 Sobic001G429500--Sobic004G345500 Sobic001G042500 Sobic001G042500 Sobic001G399300--Sobic001G042500 Sobic006G158200 Sobic006G158200 Sobic001G399300--Sobic006G158200 Sobic001G399300--Sobic007G195800 Sobic006G159600 Sobic006G159600 Sobic001G399300--Sobic006G159600 Sobic001G399300--Sobic001G429000 Sobic003G146400 Sobic003G146400 Sobic001G399300--Sobic003G146400 Sobic002G348100 Sobic002G348100 Sobic001G399300--Sobic002G348100 Sobic009G216800 Sobic009G216800 Sobic001G399300--Sobic009G216800 Sobic002G113500 Sobic002G113500 Sobic001G399300--Sobic002G113500 Sobic003G084300 Sobic003G084300 Sobic009G165500--Sobic003G084300 Sobic009G165500--Sobic001G505000 Sobic006G149200 Sobic006G149200 Sobic009G165500--Sobic006G149200 Sobic010G238800 Sobic010G238800 Sobic009G165500--Sobic010G238800 Sobic010G054200 Sobic010G054200 Sobic009G165500--Sobic010G054200 Sobic009G165500--Sobic001G429000 Sobic008G135000 Sobic008G135000 Sobic009G165500--Sobic008G135000 Sobic001G412500 Sobic001G412500 Sobic009G165500--Sobic001G412500 Sobic006G201500 Sobic006G201500 Sobic009G165500--Sobic006G201500 Sobic010G227200 Sobic010G227200 Sobic009G157600--Sobic010G227200 Sobic004G047100 Sobic004G047100 Sobic009G157600--Sobic004G047100 Sobic002G230800 Sobic002G230800 Sobic009G157600--Sobic002G230800 Sobic003G107200 Sobic003G107200 Sobic009G157600--Sobic003G107200 Sobic006G138900 Sobic006G138900 Sobic009G157600--Sobic006G138900 Sobic006G081800 Sobic006G081800 Sobic009G157600--Sobic006G081800 Sobic001G255600 Sobic001G255600 Sobic009G157600--Sobic001G255600 Sobic001G091500 Sobic001G091500 Sobic009G157600--Sobic001G091500 Sobic009G120700 Sobic009G120700 Sobic009G157600--Sobic009G120700 Sobic006G120700 Sobic006G120700 Sobic006G200000--Sobic006G120700 Sobic005G080900 Sobic005G080900 Sobic006G200000--Sobic005G080900 Sobic003G396600 Sobic003G396600 Sobic006G200000--Sobic003G396600 Sobic010G265900 Sobic010G265900 Sobic006G200000--Sobic010G265900 Sobic003G034600 Sobic003G034600 Sobic006G200000--Sobic003G034600 Sobic010G115200 Sobic010G115200 Sobic006G200000--Sobic010G115200 Sobic006G083000 Sobic006G083000 Sobic006G200000--Sobic006G083000 Sobic003G300900 Sobic003G300900 Sobic006G200000--Sobic003G300900 Sobic001G410200 Sobic001G410200 Sobic006G200000--Sobic001G410200 Sobic001G505000--Sobic009G165500 Sobic001G107300 Sobic001G107300 Sobic001G505000--Sobic001G107300 Sobic001G505000--Sobic006G149200 Sobic002G289800 Sobic002G289800 Sobic001G505000--Sobic002G289800 Sobic010G222100 Sobic010G222100 Sobic001G505000--Sobic010G222100 Sobic006G115000 Sobic006G115000 Sobic001G505000--Sobic006G115000 Sobic006G013900 Sobic006G013900 Sobic001G505000--Sobic006G013900 Sobic001G505000--Sobic001G429000 Sobic003G174700 Sobic003G174700 Sobic001G505000--Sobic003G174700 Sobic006G102900 Sobic006G102900 Sobic001G261549--Sobic006G102900 Sobic001G261549--Sobic004G285900 Sobic009G189200 Sobic009G189200 Sobic001G261549--Sobic009G189200 Sobic006G191700 Sobic006G191700 Sobic001G261549--Sobic006G191700 Sobic001G261549--Sobic009G194900 Sobic001G261549--Sobic003G107200 Sobic001G078600 Sobic001G078600 Sobic001G261549--Sobic001G078600 Sobic007G154500 Sobic007G154500 Sobic001G261549--Sobic007G154500 Sobic008G096200 Sobic008G096200 Sobic001G261549--Sobic008G096200 Sobic001G322200 Sobic001G322200 Sobic003G423000--Sobic001G322200 Sobic006G183400 Sobic006G183400 Sobic003G423000--Sobic006G183400 Sobic001G173300 Sobic001G173300 Sobic003G423000--Sobic001G173300 Sobic004G341800 Sobic004G341800 Sobic003G423000--Sobic004G341800 Sobic010G065900 Sobic010G065900 Sobic003G423000--Sobic010G065900 Sobic001G258300 Sobic001G258300 Sobic003G423000--Sobic001G258300 Sobic003G300800 Sobic003G300800 Sobic003G423000--Sobic003G300800 Sobic003G037800 Sobic003G037800 Sobic003G423000--Sobic003G037800 Sobic004G065500 Sobic004G065500 Sobic003G423000--Sobic004G065500 Sobic009G194900--Sobic001G261549 Sobic002G351100 Sobic002G351100 Sobic009G194900--Sobic002G351100 Sobic009G194900--Sobic006G102900 Sobic009G194900--Sobic003G107200 Sobic009G194900--Sobic001G255600 Sobic006G134200 Sobic006G134200 Sobic009G194900--Sobic006G134200 Sobic009G194900--Sobic002G230800 Sobic002G246900 Sobic002G246900 Sobic009G194900--Sobic002G246900 Sobic009G194900--Sobic004G047100
Octagon: transcription factors


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