Gene annotation
Transcriptome id Sobic.010G101100.1
Synonym DEL1, E2L3, E2FE, Sb10g008800
Functional annotation E2F family transcription factor protein, putative, expressed
UniProt C5Z7K6
Pfam PF02319
Panther DB PTHR12081 PTHR12081:SF46
NCBI CDD KOG2578; Transcription factor E2F/dimerization partner (TDP)-like proteins
KEGG Orthology -
Gene Ontology GO:0006355; regulation of transcription, DNA-templated GO:0005667transcription regulator complex GO:0003700DNA-binding transcription factor activity


Orthologs (automatic annotation)
TAIR AT3G48160 : DP-E2F-like 1
RAP-DB (Rice) LOC_Os06g13670.1 : E2F family transcription factor protein, putative, expressed
MaizeGDB (Corn) Zm00025a042655
Brachypodium KQK18754 , PNT63075
Barley HORVU7Hr1G040420.19 , HORVU7Hr1G040420.18 , HORVU7Hr1G040420.17 , HORVU7Hr1G040420.16 , HORVU7Hr1G040420.15 , HORVU7Hr1G040420.14 , HORVU7Hr1G040420.13 , HORVU7Hr1G040420.12 , HORVU7Hr1G040420.11 , HORVU7Hr1G040420.10 , HORVU7Hr1G040420.26 , HORVU7Hr1G040420.27 , HORVU7Hr1G040420.24 , HORVU7Hr1G040420.25 , HORVU7Hr1G040420.22 , HORVU7Hr1G040420.23 , HORVU7Hr1G040420.20 , HORVU7Hr1G040420.21 , HORVU7Hr1G040420.28 , HORVU7Hr1G040420.7 , HORVU7Hr1G040420.6 , HORVU7Hr1G040420.5 , HORVU7Hr1G040420.4 , HORVU7Hr1G040420.3 , HORVU7Hr1G040420.2 , HORVU7Hr1G040420.1 , HORVU7Hr1G040420.9 , HORVU7Hr1G040420.8 , HORVU6Hr1G076770.5 , HORVU6Hr1G076770.19 , HORVU6Hr1G076770.18 , HORVU6Hr1G076770.17 , HORVU6Hr1G076770.14 , HORVU6Hr1G076770.13 , HORVU6Hr1G076770.12
Wheat TraesCS6D02G291000 , TraesCS6D02G291000 , TraesCS7D02G199600 , TraesCS7D02G199600 , TraesCS7A02G238500 , TraesCS7A02G238500 , TraesCS6B02G341900 , TraesCS6B02G341900 , TraesCS7B02G103500 , TraesCS7B02G103500 , TraesCS6A02G311700 , TraesCS6A02G311700 , TraesCS6A02G311700
Populus -


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Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.004G217450 - -
2 Sobic.006G031400 expressed protein -
3 Sobic.002G385400 ORC6 - Putative origin recognition complex subunit 6, expressed K02608: origin recognition complex subunit 6
4 Sobic.003G034600 CAMK_CAMK_like_Aur_like.1 - CAMK includes calcium/calmodulin depedent protein kinases, expressed K08850: aurora kinase, other
5 Sobic.003G279100 mitochondrial ATP synthase g subunit family protein, putative, expressed K02140: ATPeFG, ATP5L, F-type H+-transporting ATPase subunit g
6 Sobic.003G345700 OsSCP5 - Putative Serine Carboxypeptidase homologue, expressed K16297: serine carboxypeptidase-like clade II
7 Sobic.003G125332 - K19347: SUN domain-containing protein 1/2
8 Sobic.003G276500 outer mitochondrial membrane porin, putative, expressed K15040: voltage-dependent anion channel protein 2
9 Sobic.002G074200 ribosomal protein, putative, expressed K02981: RP-S2e, small subunit ribosomal protein S2e
10 Sobic.002G136600 expressed protein -
11 Sobic.008G025600 cyclin-dependent kinase B1-1, putative, expressed K07760: cyclin-dependent kinase
12 Sobic.006G137800 expressed protein -
13 Sobic.006G083000 CAMK_CAMK_like.25 - CAMK includes calcium/calmodulin depedent protein kinases, expressed K14498: serine/threonine-protein kinase SRK2
14 Sobic.003G027400 VQ domain containing protein, putative, expressed -
15 Sobic.006G191800 Core histone H2A/H2B/H3/H4 domain containing protein, putative, expressed K11254: histone H4
16 Sobic.004G170500 histone H3, putative, expressed K11253: histone H3
17 Sobic.003G174700 expressed protein -
18 Sobic.010G252401 - K14488: SAUR family protein
19 Sobic.003G379600 methyltransferase, putative, expressed -
20 Sobic.005G080900 expressed protein -


Gene co-expression network
sample Sobic010G101100 Sobic010G101100 Sobic004G217450 Sobic004G217450 Sobic010G101100--Sobic004G217450 Sobic006G031400 Sobic006G031400 Sobic010G101100--Sobic006G031400 Sobic002G385400 Sobic002G385400 Sobic010G101100--Sobic002G385400 Sobic003G034600 Sobic003G034600 Sobic010G101100--Sobic003G034600 Sobic003G279100 Sobic003G279100 Sobic010G101100--Sobic003G279100 Sobic003G345700 Sobic003G345700 Sobic010G101100--Sobic003G345700 Sobic003G125332 Sobic003G125332 Sobic010G101100--Sobic003G125332 Sobic003G276500 Sobic003G276500 Sobic010G101100--Sobic003G276500 Sobic002G074200 Sobic002G074200 Sobic010G101100--Sobic002G074200 Sobic004G217450--Sobic002G385400 Sobic004G217450--Sobic003G034600 Sobic004G217450--Sobic003G279100 Sobic006G149200 Sobic006G149200 Sobic004G217450--Sobic006G149200 Sobic004G274900 Sobic004G274900 Sobic004G217450--Sobic004G274900 Sobic007G198000 Sobic007G198000 Sobic004G217450--Sobic007G198000 Sobic003G174700 Sobic003G174700 Sobic004G217450--Sobic003G174700 Sobic008G025600 Sobic008G025600 Sobic004G217450--Sobic008G025600 Sobic006G115000 Sobic006G115000 Sobic004G217450--Sobic006G115000 Sobic001G296000 Sobic001G296000 Sobic006G031400--Sobic001G296000 Sobic006G031400--Sobic010G101100 Sobic001G088000 Sobic001G088000 Sobic006G031400--Sobic001G088000 Sobic009G120700 Sobic009G120700 Sobic006G031400--Sobic009G120700 Sobic004G047100 Sobic004G047100 Sobic006G031400--Sobic004G047100 Sobic009G157600 Sobic009G157600 Sobic006G031400--Sobic009G157600 Sobic001G078600 Sobic001G078600 Sobic006G031400--Sobic001G078600 Sobic002G113600 Sobic002G113600 Sobic006G031400--Sobic002G113600 Sobic001G230300 Sobic001G230300 Sobic006G031400--Sobic001G230300 Sobic002G385400--Sobic004G217450 Sobic010G023900 Sobic010G023900 Sobic002G385400--Sobic010G023900 Sobic002G258300 Sobic002G258300 Sobic002G385400--Sobic002G258300 Sobic004G342400 Sobic004G342400 Sobic002G385400--Sobic004G342400 Sobic003G084300 Sobic003G084300 Sobic002G385400--Sobic003G084300 Sobic005G080900 Sobic005G080900 Sobic002G385400--Sobic005G080900 Sobic002G385400--Sobic003G034600 Sobic002G385400--Sobic004G274900 Sobic002G385400--Sobic006G115000 Sobic003G034600--Sobic004G217450 Sobic003G122200 Sobic003G122200 Sobic003G034600--Sobic003G122200 Sobic001G475500 Sobic001G475500 Sobic003G034600--Sobic001G475500 Sobic003G307400 Sobic003G307400 Sobic003G034600--Sobic003G307400 Sobic006G191800 Sobic006G191800 Sobic003G034600--Sobic006G191800 Sobic006G200000 Sobic006G200000 Sobic003G034600--Sobic006G200000 Sobic003G160700 Sobic003G160700 Sobic003G034600--Sobic003G160700 Sobic009G173500 Sobic009G173500 Sobic003G034600--Sobic009G173500 Sobic007G150800 Sobic007G150800 Sobic003G034600--Sobic007G150800 Sobic003G279100--Sobic004G217450 Sobic003G279100--Sobic006G149200 Sobic004G285900 Sobic004G285900 Sobic003G279100--Sobic004G285900 Sobic001G300400 Sobic001G300400 Sobic003G279100--Sobic001G300400 Sobic010G222100 Sobic010G222100 Sobic003G279100--Sobic010G222100 Sobic006G081800 Sobic006G081800 Sobic003G279100--Sobic006G081800 Sobic010G215800 Sobic010G215800 Sobic003G279100--Sobic010G215800 Sobic001G505000 Sobic001G505000 Sobic003G279100--Sobic001G505000 Sobic001G261549 Sobic001G261549 Sobic003G279100--Sobic001G261549 Sobic003G247600 Sobic003G247600 Sobic003G345700--Sobic003G247600 Sobic010G138300 Sobic010G138300 Sobic003G345700--Sobic010G138300 Sobic001G156500 Sobic001G156500 Sobic003G345700--Sobic001G156500 Sobic003G345700--Sobic003G122200 Sobic003G236600 Sobic003G236600 Sobic003G345700--Sobic003G236600 Sobic003G294100 Sobic003G294100 Sobic003G345700--Sobic003G294100 Sobic001G038300 Sobic001G038300 Sobic003G345700--Sobic001G038300 Sobic006G102900 Sobic006G102900 Sobic003G345700--Sobic006G102900 Sobic003G345700--Sobic003G034600 Sobic002G136600 Sobic002G136600 Sobic003G125332--Sobic002G136600 Sobic003G125332--Sobic003G034600 Sobic003G125332--Sobic010G101100 Sobic003G125332--Sobic002G074200 Sobic001G531300 Sobic001G531300 Sobic003G125332--Sobic001G531300 Sobic003G125332--Sobic003G276500 Sobic006G190600 Sobic006G190600 Sobic003G125332--Sobic006G190600 Sobic003G125332--Sobic001G475500 Sobic005G142500 Sobic005G142500 Sobic003G125332--Sobic005G142500 Sobic003G375100 Sobic003G375100 Sobic003G276500--Sobic003G375100 Sobic003G276500--Sobic002G136600 Sobic003G276500--Sobic010G101100 Sobic003G276500--Sobic003G125332 Sobic003G276500--Sobic002G074200 Sobic009G042500 Sobic009G042500 Sobic003G276500--Sobic009G042500 Sobic003G276500--Sobic001G296000 Sobic009G080300 Sobic009G080300 Sobic003G276500--Sobic009G080300 Sobic010G085000 Sobic010G085000 Sobic003G276500--Sobic010G085000 Sobic002G074200--Sobic005G080900 Sobic002G074200--Sobic003G160700 Sobic002G372400 Sobic002G372400 Sobic002G074200--Sobic002G372400 Sobic006G159600 Sobic006G159600 Sobic002G074200--Sobic006G159600 Sobic006G067800 Sobic006G067800 Sobic002G074200--Sobic006G067800 Sobic003G078200 Sobic003G078200 Sobic002G074200--Sobic003G078200 Sobic003G436700 Sobic003G436700 Sobic002G074200--Sobic003G436700 Sobic010G076400 Sobic010G076400 Sobic002G074200--Sobic010G076400 Sobic006G137800 Sobic006G137800 Sobic002G074200--Sobic006G137800
Octagon: transcription factors


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