Gene annotation
Transcriptome id Sobic.002G136600.1
Synonym Sb02g012360
Functional annotation expressed protein
UniProt C5X6J8
Pfam PF05347
Panther DB PTHR36758
NCBI CDD -
KEGG Orthology -
Gene Ontology -


Orthologs (automatic annotation)
TAIR AT3G19508 : -
RAP-DB (Rice) LOC_Os01g24020.1 : expressed protein
MaizeGDB (Corn) -
Brachypodium KQK16399
Barley HORVU6Hr1G026300.1
Wheat TraesCS6D02G125700
Populus -


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Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.002G074200 ribosomal protein, putative, expressed K02981: RP-S2e, small subunit ribosomal protein S2e
2 Sobic.003G375100 snRK1-interacting protein 1, putative, expressed -
3 Sobic.004G170500 histone H3, putative, expressed K11253: histone H3
4 Sobic.004G252100 ribosomal protein L7Ae, putative, expressed K11129: NHP2, H/ACA ribonucleoprotein complex subunit 2
5 Sobic.001G529400 Core histone H2A/H2B/H3/H4 domain containing protein, putative, expressed K11254: histone H4
6 Sobic.003G125332 - K19347: SUN domain-containing protein 1/2
7 Sobic.003G276500 outer mitochondrial membrane porin, putative, expressed K15040: voltage-dependent anion channel protein 2
8 Sobic.007G195800 uncharacterized protein family UPF0016 domain containing protein, expressed -
9 Sobic.010G101100 E2F family transcription factor protein, putative, expressed -
10 Sobic.010G076400 40S ribosomal protein S17, putative, expressed K02962: RP-S17e, small subunit ribosomal protein S17e
11 Sobic.001G502900 nicotiana lesion-inducing like, putative, expressed -
12 Sobic.003G034600 CAMK_CAMK_like_Aur_like.1 - CAMK includes calcium/calmodulin depedent protein kinases, expressed K08850: aurora kinase, other
13 Sobic.006G190600 heavy metal-associated domain containing protein, expressed -
14 Sobic.009G223300 WD repeat-containing protein, putative, expressed K14753: guanine nucleotide-binding protein subunit beta-2-like 1 protein
15 Sobic.010G110901 - -
16 Sobic.001G475500 ras-related protein, putative, expressed K07904: Ras-related protein Rab-11A
17 Sobic.006G191800 Core histone H2A/H2B/H3/H4 domain containing protein, putative, expressed K11254: histone H4
18 Sobic.003G078200 ribosomal protein L24, putative, expressed K02898: RP-L26e, large subunit ribosomal protein L26e
19 Sobic.010G115200 ribosomal protein L7Ae, putative, expressed K11129: NHP2, H/ACA ribonucleoprotein complex subunit 2
20 Sobic.009G173500 40S ribosomal protein S26, putative, expressed K02976: RP-S26e, small subunit ribosomal protein S26e


Gene co-expression network
sample Sobic002G136600 Sobic002G136600 Sobic002G074200 Sobic002G074200 Sobic002G136600--Sobic002G074200 Sobic003G375100 Sobic003G375100 Sobic002G136600--Sobic003G375100 Sobic004G170500 Sobic004G170500 Sobic002G136600--Sobic004G170500 Sobic004G252100 Sobic004G252100 Sobic002G136600--Sobic004G252100 Sobic001G529400 Sobic001G529400 Sobic002G136600--Sobic001G529400 Sobic003G125332 Sobic003G125332 Sobic002G136600--Sobic003G125332 Sobic003G276500 Sobic003G276500 Sobic002G136600--Sobic003G276500 Sobic007G195800 Sobic007G195800 Sobic002G136600--Sobic007G195800 Sobic010G101100 Sobic010G101100 Sobic002G136600--Sobic010G101100 Sobic005G080900 Sobic005G080900 Sobic002G074200--Sobic005G080900 Sobic003G160700 Sobic003G160700 Sobic002G074200--Sobic003G160700 Sobic002G372400 Sobic002G372400 Sobic002G074200--Sobic002G372400 Sobic006G159600 Sobic006G159600 Sobic002G074200--Sobic006G159600 Sobic006G067800 Sobic006G067800 Sobic002G074200--Sobic006G067800 Sobic003G078200 Sobic003G078200 Sobic002G074200--Sobic003G078200 Sobic003G436700 Sobic003G436700 Sobic002G074200--Sobic003G436700 Sobic010G076400 Sobic010G076400 Sobic002G074200--Sobic010G076400 Sobic006G137800 Sobic006G137800 Sobic002G074200--Sobic006G137800 Sobic003G375100--Sobic002G136600 Sobic003G375100--Sobic003G276500 Sobic010G054300 Sobic010G054300 Sobic003G375100--Sobic010G054300 Sobic010G082850 Sobic010G082850 Sobic003G375100--Sobic010G082850 Sobic003G375100--Sobic004G252100 Sobic003G375100--Sobic002G074200 Sobic003G289601 Sobic003G289601 Sobic003G375100--Sobic003G289601 Sobic003G310600 Sobic003G310600 Sobic003G375100--Sobic003G310600 Sobic001G162800 Sobic001G162800 Sobic003G375100--Sobic001G162800 Sobic006G076400 Sobic006G076400 Sobic004G170500--Sobic006G076400 Sobic003G057100 Sobic003G057100 Sobic004G170500--Sobic003G057100 Sobic006G134900 Sobic006G134900 Sobic004G170500--Sobic006G134900 Sobic001G078600 Sobic001G078600 Sobic004G170500--Sobic001G078600 Sobic004G279601 Sobic004G279601 Sobic004G170500--Sobic004G279601 Sobic003G347900 Sobic003G347900 Sobic004G170500--Sobic003G347900 Sobic006G081800 Sobic006G081800 Sobic004G170500--Sobic006G081800 Sobic004G170500--Sobic002G136600 Sobic001G205000 Sobic001G205000 Sobic004G170500--Sobic001G205000 Sobic001G016500 Sobic001G016500 Sobic004G252100--Sobic001G016500 Sobic005G019700 Sobic005G019700 Sobic004G252100--Sobic005G019700 Sobic006G116700 Sobic006G116700 Sobic004G252100--Sobic006G116700 Sobic001G018900 Sobic001G018900 Sobic004G252100--Sobic001G018900 Sobic007G019000 Sobic007G019000 Sobic004G252100--Sobic007G019000 Sobic007G190800 Sobic007G190800 Sobic004G252100--Sobic007G190800 Sobic001G533500 Sobic001G533500 Sobic004G252100--Sobic001G533500 Sobic009G050300 Sobic009G050300 Sobic004G252100--Sobic009G050300 Sobic007G197800 Sobic007G197800 Sobic004G252100--Sobic007G197800 Sobic001G313200 Sobic001G313200 Sobic001G529400--Sobic001G313200 Sobic010G047100 Sobic010G047100 Sobic001G529400--Sobic010G047100 Sobic006G191800 Sobic006G191800 Sobic001G529400--Sobic006G191800 Sobic009G015900 Sobic009G015900 Sobic001G529400--Sobic009G015900 Sobic001G529400--Sobic003G347900 Sobic010G221300 Sobic010G221300 Sobic001G529400--Sobic010G221300 Sobic001G529400--Sobic003G078200 Sobic001G529400--Sobic006G137800 Sobic001G529400--Sobic003G057100 Sobic003G125332--Sobic002G136600 Sobic003G034600 Sobic003G034600 Sobic003G125332--Sobic003G034600 Sobic003G125332--Sobic010G101100 Sobic003G125332--Sobic002G074200 Sobic001G531300 Sobic001G531300 Sobic003G125332--Sobic001G531300 Sobic003G125332--Sobic003G276500 Sobic006G190600 Sobic006G190600 Sobic003G125332--Sobic006G190600 Sobic001G475500 Sobic001G475500 Sobic003G125332--Sobic001G475500 Sobic005G142500 Sobic005G142500 Sobic003G125332--Sobic005G142500 Sobic003G276500--Sobic003G375100 Sobic003G276500--Sobic002G136600 Sobic003G276500--Sobic010G101100 Sobic003G276500--Sobic003G125332 Sobic003G276500--Sobic002G074200 Sobic009G042500 Sobic009G042500 Sobic003G276500--Sobic009G042500 Sobic001G296000 Sobic001G296000 Sobic003G276500--Sobic001G296000 Sobic009G080300 Sobic009G080300 Sobic003G276500--Sobic009G080300 Sobic010G085000 Sobic010G085000 Sobic003G276500--Sobic010G085000 Sobic007G195800--Sobic006G137800 Sobic008G139600 Sobic008G139600 Sobic007G195800--Sobic008G139600 Sobic001G502900 Sobic001G502900 Sobic007G195800--Sobic001G502900 Sobic002G389400 Sobic002G389400 Sobic007G195800--Sobic002G389400 Sobic007G195800--Sobic006G191800 Sobic002G323300 Sobic002G323300 Sobic007G195800--Sobic002G323300 Sobic004G065500 Sobic004G065500 Sobic007G195800--Sobic004G065500 Sobic001G115300 Sobic001G115300 Sobic007G195800--Sobic001G115300 Sobic005G113300 Sobic005G113300 Sobic007G195800--Sobic005G113300 Sobic004G217450 Sobic004G217450 Sobic010G101100--Sobic004G217450 Sobic006G031400 Sobic006G031400 Sobic010G101100--Sobic006G031400 Sobic002G385400 Sobic002G385400 Sobic010G101100--Sobic002G385400 Sobic010G101100--Sobic003G034600 Sobic003G279100 Sobic003G279100 Sobic010G101100--Sobic003G279100 Sobic003G345700 Sobic003G345700 Sobic010G101100--Sobic003G345700 Sobic010G101100--Sobic003G125332 Sobic010G101100--Sobic003G276500 Sobic010G101100--Sobic002G074200
Octagon: transcription factors


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