Gene annotation
Transcriptome id Sobic.006G190600.1,Sobic.006G190600.2
Synonym Sb06g026390
Functional annotation heavy metal-associated domain containing protein, expressed
UniProt C5YEJ1
Pfam PF00403
Panther DB PTHR22814 PTHR22814:SF49
NCBI CDD KOG1603; Copper chaperone
KEGG Orthology -
Gene Ontology -


Orthologs (automatic annotation)
TAIR AT4G27590 : Heavy metal transport/detoxification superfamily protein
RAP-DB (Rice) LOC_Os04g49260.1 : heavy metal-associated domain containing protein, expressed
MaizeGDB (Corn) Zm00025a010074
Brachypodium KQJ84193 , KQJ84194
Barley HORVU2Hr1G093870.1 , HORVU2Hr1G093870.2 , HORVU2Hr1G093870.3 , HORVU2Hr1G093870.4
Wheat TraesCS2B02G412500 , TraesCS2A02G394500 , TraesCS2D02G392200
Populus -


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Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.001G481000 expressed protein -
2 Sobic.003G117500 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@RALFL9 - Rapid ALkalinization Factor RALF family protein precursor, expressed -
3 Sobic.001G304300 LTPL138 - Protease inhibitor/seed storage/LTP family protein precursor, expressed -
4 Sobic.005G142500 plant protein of unknown function domain containing protein, expressed -
5 Sobic.001G295800 expressed protein -
6 Sobic.002G350500 AP2 domain containing protein, expressed K09286: EREBP-like factor
7 Sobic.003G321200 pectinesterase, putative, expressed K01051: pectinesterase
8 Sobic.005G004700 "domain confirmed by Pfam database, expressed in leaf and root, expression induced by BR treatment"(PubMedID : 20499123)@DUF260 domain containing protein, putative, expressed -
9 Sobic.002G247800 Highest expression level in primordial inflorescence(PubMedID : 27501690)@OsSPL17 - SBP-box gene family member, expressed -
10 Sobic.004G266200 Homologous to Dof genes in Arabidopsis and rice.(PubMedID : 21161392)@dof zinc finger domain containing protein, putative, expressed -
11 Sobic.009G248100 SAG (Senescence-associated gene): up-regulated gene during dark-induced senescence.(PubMedID : 27586543)@expressed protein -
12 Sobic.001G475500 ras-related protein, putative, expressed K07904: Ras-related protein Rab-11A
13 Sobic.004G015900 expressed protein -
14 Sobic.003G407001 - -
15 Sobic.002G136600 expressed protein -
16 Sobic.003G027400 VQ domain containing protein, putative, expressed -
17 Sobic.001G502900 nicotiana lesion-inducing like, putative, expressed -
18 Sobic.003G125332 - K19347: SUN domain-containing protein 1/2
19 Sobic.007G124301 - -
20 Sobic.004G203700 ubiquitin family protein, putative, expressed -


Gene co-expression network
sample Sobic006G190600 Sobic006G190600 Sobic001G481000 Sobic001G481000 Sobic006G190600--Sobic001G481000 Sobic003G117500 Sobic003G117500 Sobic006G190600--Sobic003G117500 Sobic001G304300 Sobic001G304300 Sobic006G190600--Sobic001G304300 Sobic005G142500 Sobic005G142500 Sobic006G190600--Sobic005G142500 Sobic001G295800 Sobic001G295800 Sobic006G190600--Sobic001G295800 Sobic002G350500 Sobic002G350500 Sobic006G190600--Sobic002G350500 Sobic003G321200 Sobic003G321200 Sobic006G190600--Sobic003G321200 Sobic005G004700 Sobic005G004700 Sobic006G190600--Sobic005G004700 Sobic002G247800 Sobic002G247800 Sobic006G190600--Sobic002G247800 Sobic001G304100 Sobic001G304100 Sobic001G481000--Sobic001G304100 Sobic001G310300 Sobic001G310300 Sobic001G481000--Sobic001G310300 Sobic010G184800 Sobic010G184800 Sobic001G481000--Sobic010G184800 Sobic004G203700 Sobic004G203700 Sobic001G481000--Sobic004G203700 Sobic009G188000 Sobic009G188000 Sobic001G481000--Sobic009G188000 Sobic003G027400 Sobic003G027400 Sobic001G481000--Sobic003G027400 Sobic001G481000--Sobic003G321200 Sobic002G213600 Sobic002G213600 Sobic001G481000--Sobic002G213600 Sobic003G160700 Sobic003G160700 Sobic001G481000--Sobic003G160700 Sobic001G475500 Sobic001G475500 Sobic003G117500--Sobic001G475500 Sobic003G117500--Sobic003G027400 Sobic003G117500--Sobic001G481000 Sobic003G117500--Sobic001G310300 Sobic007G150800 Sobic007G150800 Sobic003G117500--Sobic007G150800 Sobic001G434300 Sobic001G434300 Sobic003G117500--Sobic001G434300 Sobic003G219800 Sobic003G219800 Sobic003G117500--Sobic003G219800 Sobic003G117500--Sobic002G350500 Sobic001G502900 Sobic001G502900 Sobic003G117500--Sobic001G502900 Sobic001G304300--Sobic003G321200 Sobic009G248100 Sobic009G248100 Sobic001G304300--Sobic009G248100 Sobic001G004800 Sobic001G004800 Sobic001G304300--Sobic001G004800 Sobic002G201600 Sobic002G201600 Sobic001G304300--Sobic002G201600 Sobic004G266200 Sobic004G266200 Sobic001G304300--Sobic004G266200 Sobic001G304300--Sobic006G190600 Sobic001G304300--Sobic001G481000 Sobic003G417800 Sobic003G417800 Sobic001G304300--Sobic003G417800 Sobic001G304300--Sobic005G142500 Sobic004G170800 Sobic004G170800 Sobic005G142500--Sobic004G170800 Sobic004G050700 Sobic004G050700 Sobic005G142500--Sobic004G050700 Sobic001G264300 Sobic001G264300 Sobic005G142500--Sobic001G264300 Sobic001G264400 Sobic001G264400 Sobic005G142500--Sobic001G264400 Sobic003G427700 Sobic003G427700 Sobic005G142500--Sobic003G427700 Sobic005G051600 Sobic005G051600 Sobic005G142500--Sobic005G051600 Sobic005G142500--Sobic002G247800 Sobic009G221800 Sobic009G221800 Sobic005G142500--Sobic009G221800 Sobic009G130300 Sobic009G130300 Sobic005G142500--Sobic009G130300 Sobic005G043000 Sobic005G043000 Sobic001G295800--Sobic005G043000 Sobic001G514200 Sobic001G514200 Sobic001G295800--Sobic001G514200 Sobic001G295800--Sobic001G481000 Sobic003G307400 Sobic003G307400 Sobic001G295800--Sobic003G307400 Sobic001G295800--Sobic001G310300 Sobic001G295800--Sobic009G221800 Sobic001G295800--Sobic009G130300 Sobic003G052900 Sobic003G052900 Sobic001G295800--Sobic003G052900 Sobic001G295800--Sobic009G248100 Sobic006G137800 Sobic006G137800 Sobic002G350500--Sobic006G137800 Sobic003G364300 Sobic003G364300 Sobic002G350500--Sobic003G364300 Sobic010G156500 Sobic010G156500 Sobic002G350500--Sobic010G156500 Sobic002G350500--Sobic004G203700 Sobic009G159400 Sobic009G159400 Sobic002G350500--Sobic009G159400 Sobic001G435000 Sobic001G435000 Sobic002G350500--Sobic001G435000 Sobic002G389400 Sobic002G389400 Sobic002G350500--Sobic002G389400 Sobic001G529400 Sobic001G529400 Sobic002G350500--Sobic001G529400 Sobic002G350500--Sobic003G027400 Sobic003G321200--Sobic001G481000 Sobic003G321200--Sobic001G435000 Sobic003G321200--Sobic003G417800 Sobic006G092500 Sobic006G092500 Sobic003G321200--Sobic006G092500 Sobic003G321200--Sobic003G027400 Sobic010G259600 Sobic010G259600 Sobic003G321200--Sobic010G259600 Sobic004G166700 Sobic004G166700 Sobic003G321200--Sobic004G166700 Sobic004G100700 Sobic004G100700 Sobic003G321200--Sobic004G100700 Sobic005G099000 Sobic005G099000 Sobic003G321200--Sobic005G099000 Sobic002G233500 Sobic002G233500 Sobic005G004700--Sobic002G233500 Sobic005G004700--Sobic003G117500 Sobic002G173200 Sobic002G173200 Sobic005G004700--Sobic002G173200 Sobic005G004700--Sobic003G427700 Sobic005G004700--Sobic001G475500 Sobic008G110200 Sobic008G110200 Sobic005G004700--Sobic008G110200 Sobic004G030300 Sobic004G030300 Sobic005G004700--Sobic004G030300 Sobic005G004700--Sobic001G481000 Sobic001G038300 Sobic001G038300 Sobic005G004700--Sobic001G038300 Sobic007G225400 Sobic007G225400 Sobic002G247800--Sobic007G225400 Sobic002G179150 Sobic002G179150 Sobic002G247800--Sobic002G179150 Sobic004G170900 Sobic004G170900 Sobic002G247800--Sobic004G170900 Sobic001G470100 Sobic001G470100 Sobic002G247800--Sobic001G470100 Sobic002G247800--Sobic005G142500 Sobic004G285900 Sobic004G285900 Sobic002G247800--Sobic004G285900 Sobic001G030400 Sobic001G030400 Sobic002G247800--Sobic001G030400 Sobic010G159100 Sobic010G159100 Sobic002G247800--Sobic010G159100 Sobic003G011100 Sobic003G011100 Sobic002G247800--Sobic003G011100
Octagon: transcription factors


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