Gene annotation
Transcriptome id Sobic.003G407001.1
Synonym -
Functional annotation -
UniProt A0A1W0W179
Pfam PF11820
Panther DB PTHR33128 PTHR33128:SF8
NCBI CDD -
KEGG Orthology -
Gene Ontology -


Orthologs (automatic annotation)
TAIR AT3G27027 : Protein of unknown function (DUF 3339)
RAP-DB (Rice) LOC_Os01g69890.1 : expressed protein
MaizeGDB (Corn) Zm00025a039281
Brachypodium KQK11231
Barley -
Wheat -
Populus -


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Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.003G117500 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@RALFL9 - Rapid ALkalinization Factor RALF family protein precursor, expressed -
2 Sobic.003G060000 Cupin domain containing protein, expressed -
3 Sobic.001G361600 chaperonin, putative, expressed K04078: groES, chaperonin GroES
4 Sobic.007G150800 expressed protein -
5 Sobic.003G347900 Core histone H2A/H2B/H3/H4 domain containing protein, putative, expressed K11254: histone H4
6 Sobic.002G124500 expansin precursor, putative, expressed -
7 Sobic.003G053400 hydrolase, alpha/beta fold family protein, putative, expressed -
8 Sobic.004G045400 60S ribosomal protein L37a, putative, expressed K02921: RP-L37Ae, large subunit ribosomal protein L37Ae
9 Sobic.004G318700 OsSub22 - Putative Subtilisin homologue, expressed -
10 Sobic.001G475500 ras-related protein, putative, expressed K07904: Ras-related protein Rab-11A
11 Sobic.001G310300 glutathione S-transferase, putative, expressed K00799: GST, glutathione S-transferase
12 Sobic.010G158500 Zinc finger, C3HC4 type domain containing protein, expressed -
13 Sobic.002G231600 "SAG (Senescence-associated gene): differentially expressed gene during developmental, salt-induced, and dark-induced senescence."(PubMedID : 27586543)@glutathione S-transferase, putative, expressed K00799: GST, glutathione S-transferase
14 Sobic.003G250700 fasciclin domain containing protein, expressed -
15 Sobic.001G038300 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@leaf senescence related protein, putative, expressed -
16 Sobic.009G109000 expressed protein -
17 Sobic.001G508900 60S ribosomal protein L21-2, putative, expressed K02889: RP-L21e, large subunit ribosomal protein L21e
18 Sobic.001G481000 expressed protein -
19 Sobic.002G411900 SAG (Senescence-associated gene): up-regulated gene during dark-induced senescence.(PubMedID : 27586543)@SRC2 protein, putative, expressed -
20 Sobic.006G158400 short-chain dehydrogenase/reductase, putative, expressed K15095: (+)-neomenthol dehydrogenase


Gene co-expression network
sample Sobic003G407001 Sobic003G407001 Sobic003G117500 Sobic003G117500 Sobic003G407001--Sobic003G117500 Sobic003G060000 Sobic003G060000 Sobic003G407001--Sobic003G060000 Sobic001G361600 Sobic001G361600 Sobic003G407001--Sobic001G361600 Sobic007G150800 Sobic007G150800 Sobic003G407001--Sobic007G150800 Sobic003G347900 Sobic003G347900 Sobic003G407001--Sobic003G347900 Sobic002G124500 Sobic002G124500 Sobic003G407001--Sobic002G124500 Sobic003G053400 Sobic003G053400 Sobic003G407001--Sobic003G053400 Sobic004G045400 Sobic004G045400 Sobic003G407001--Sobic004G045400 Sobic004G318700 Sobic004G318700 Sobic003G407001--Sobic004G318700 Sobic001G475500 Sobic001G475500 Sobic003G117500--Sobic001G475500 Sobic003G027400 Sobic003G027400 Sobic003G117500--Sobic003G027400 Sobic001G481000 Sobic001G481000 Sobic003G117500--Sobic001G481000 Sobic001G310300 Sobic001G310300 Sobic003G117500--Sobic001G310300 Sobic003G117500--Sobic007G150800 Sobic001G434300 Sobic001G434300 Sobic003G117500--Sobic001G434300 Sobic003G219800 Sobic003G219800 Sobic003G117500--Sobic003G219800 Sobic002G350500 Sobic002G350500 Sobic003G117500--Sobic002G350500 Sobic001G502900 Sobic001G502900 Sobic003G117500--Sobic001G502900 SobicK026900 SobicK026900 Sobic003G060000--SobicK026900 Sobic001G114900 Sobic001G114900 Sobic003G060000--Sobic001G114900 Sobic008G027600 Sobic008G027600 Sobic003G060000--Sobic008G027600 Sobic010G009900 Sobic010G009900 Sobic003G060000--Sobic010G009900 Sobic010G158500 Sobic010G158500 Sobic003G060000--Sobic010G158500 Sobic003G073460 Sobic003G073460 Sobic003G060000--Sobic003G073460 Sobic005G066100 Sobic005G066100 Sobic003G060000--Sobic005G066100 Sobic006G158400 Sobic006G158400 Sobic003G060000--Sobic006G158400 Sobic004G202400 Sobic004G202400 Sobic003G060000--Sobic004G202400 Sobic001G295200 Sobic001G295200 Sobic001G361600--Sobic001G295200 Sobic005G113300 Sobic005G113300 Sobic001G361600--Sobic005G113300 Sobic006G116700 Sobic006G116700 Sobic001G361600--Sobic006G116700 Sobic001G018900 Sobic001G018900 Sobic001G361600--Sobic001G018900 Sobic004G220000 Sobic004G220000 Sobic001G361600--Sobic004G220000 Sobic003G078200 Sobic003G078200 Sobic001G361600--Sobic003G078200 Sobic006G141700 Sobic006G141700 Sobic001G361600--Sobic006G141700 Sobic009G188000 Sobic009G188000 Sobic001G361600--Sobic009G188000 Sobic003G408100 Sobic003G408100 Sobic001G361600--Sobic003G408100 Sobic007G150800--Sobic001G475500 Sobic002G128800 Sobic002G128800 Sobic007G150800--Sobic002G128800 Sobic010G070500 Sobic010G070500 Sobic007G150800--Sobic010G070500 Sobic006G278100 Sobic006G278100 Sobic007G150800--Sobic006G278100 Sobic009G212200 Sobic009G212200 Sobic007G150800--Sobic009G212200 Sobic001G444800 Sobic001G444800 Sobic007G150800--Sobic001G444800 Sobic003G122200 Sobic003G122200 Sobic007G150800--Sobic003G122200 Sobic009G173500 Sobic009G173500 Sobic007G150800--Sobic009G173500 Sobic003G011100 Sobic003G011100 Sobic007G150800--Sobic003G011100 Sobic006G057200 Sobic006G057200 Sobic003G347900--Sobic006G057200 Sobic007G198000 Sobic007G198000 Sobic003G347900--Sobic007G198000 Sobic001G313200 Sobic001G313200 Sobic003G347900--Sobic001G313200 Sobic001G529400 Sobic001G529400 Sobic003G347900--Sobic001G529400 Sobic006G191800 Sobic006G191800 Sobic003G347900--Sobic006G191800 Sobic002G276000 Sobic002G276000 Sobic003G347900--Sobic002G276000 Sobic010G047100 Sobic010G047100 Sobic003G347900--Sobic010G047100 Sobic003G347900--Sobic003G078200 Sobic003G057100 Sobic003G057100 Sobic003G347900--Sobic003G057100 Sobic002G124500--Sobic003G053400 Sobic002G124500--SobicK026900 Sobic001G508532 Sobic001G508532 Sobic002G124500--Sobic001G508532 Sobic002G425000 Sobic002G425000 Sobic002G124500--Sobic002G425000 Sobic004G348800 Sobic004G348800 Sobic002G124500--Sobic004G348800 Sobic002G124500--Sobic010G158500 Sobic003G053300 Sobic003G053300 Sobic002G124500--Sobic003G053300 Sobic010G212500 Sobic010G212500 Sobic002G124500--Sobic010G212500 Sobic006G202600 Sobic006G202600 Sobic002G124500--Sobic006G202600 Sobic002G261500 Sobic002G261500 Sobic003G053400--Sobic002G261500 Sobic009G088900 Sobic009G088900 Sobic003G053400--Sobic009G088900 Sobic003G053400--Sobic002G425000 Sobic003G053400--Sobic002G124500 Sobic009G109000 Sobic009G109000 Sobic003G053400--Sobic009G109000 Sobic003G053400--Sobic010G212500 Sobic004G297900 Sobic004G297900 Sobic003G053400--Sobic004G297900 Sobic002G365550 Sobic002G365550 Sobic003G053400--Sobic002G365550 Sobic002G365801 Sobic002G365801 Sobic003G053400--Sobic002G365801 Sobic010G205400 Sobic010G205400 Sobic004G045400--Sobic010G205400 Sobic004G045400--Sobic006G158400 Sobic002G042000 Sobic002G042000 Sobic004G045400--Sobic002G042000 Sobic001G054500 Sobic001G054500 Sobic004G045400--Sobic001G054500 Sobic003G364300 Sobic003G364300 Sobic004G045400--Sobic003G364300 Sobic007G008100 Sobic007G008100 Sobic004G045400--Sobic007G008100 Sobic004G045400--Sobic001G361600 Sobic002G040900 Sobic002G040900 Sobic004G045400--Sobic002G040900 Sobic006G159100 Sobic006G159100 Sobic004G045400--Sobic006G159100 Sobic001G416200 Sobic001G416200 Sobic004G318700--Sobic001G416200 Sobic001G238400 Sobic001G238400 Sobic004G318700--Sobic001G238400 Sobic001G304100 Sobic001G304100 Sobic004G318700--Sobic001G304100 Sobic001G161500 Sobic001G161500 Sobic004G318700--Sobic001G161500 Sobic002G213600 Sobic002G213600 Sobic004G318700--Sobic002G213600 Sobic004G318700--Sobic009G188000 Sobic001G237900 Sobic001G237900 Sobic004G318700--Sobic001G237900 Sobic004G349125 Sobic004G349125 Sobic004G318700--Sobic004G349125 Sobic004G318700--Sobic004G202400
Octagon: transcription factors


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