Gene annotation
Transcriptome id Sobic.003G060000.1
Synonym GLP5, Sb03g005150
Functional annotation Cupin domain containing protein, expressed
UniProt C5XP61
Pfam PF07883
Panther DB PTHR31238 PTHR31238:SF22
NCBI CDD -
KEGG Orthology -
Gene Ontology -


Orthologs (automatic annotation)
TAIR AT1G09560 : germin-like protein 5
RAP-DB (Rice) LOC_Os01g14670.1 : Cupin domain containing protein, expressed
MaizeGDB (Corn) Zm00025a035173 , Zm00025a024209 , Zm00025a045177 , Zm00025a019053
Brachypodium KQK03596 , KQK03989 , PNT62629
Barley HORVU3Hr1G107870.1 , HORVU3Hr1G034100.8 , HORVU3Hr1G034100.7 , HORVU3Hr1G034100.6 , HORVU3Hr1G034100.5 , HORVU3Hr1G034100.4 , HORVU3Hr1G034100.3 , HORVU3Hr1G034100.2 , HORVU3Hr1G034100.1
Wheat TraesCS3D02G176100 , TraesCS3D02G489700 , TraesCS3B02G543700 , TraesCS7D02G477200 , TraesCS3B02G200200 , TraesCS3A02G040900 , TraesCS3B02G544200 , TraesCS3D02G490500
Populus -


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cDNA sequences
Sobic.003G060000


Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.K026900 peroxidase precursor, putative, expressed K00430: peroxidase
2 Sobic.001G114900 - -
3 Sobic.008G027600 zinc finger, C3HC4 type domain containing protein, expressed -
4 Sobic.010G009900 - -
5 Sobic.010G158500 Zinc finger, C3HC4 type domain containing protein, expressed -
6 Sobic.003G073460 - -
7 Sobic.005G066100 glycine-rich cell wall structural protein 2 precursor, putative, expressed -
8 Sobic.006G158400 short-chain dehydrogenase/reductase, putative, expressed K15095: (+)-neomenthol dehydrogenase
9 Sobic.004G202400 "SAG (Senescence-associated gene): differentially expressed gene during developmental, salt-induced, and dark-induced senescence."(PubMedID : 27586543)@high affinity nitrate transporter, putative, expressed -
10 Sobic.002G369400 Sulfotransferase family protein (At)(PubMedID : 27208977)@sulfotransferase domain containing protein, expressed -
11 Sobic.010G196000 DNA binding protein, putative, expressed -
12 Sobic.004G318700 OsSub22 - Putative Subtilisin homologue, expressed -
13 Sobic.006G202600 Up-reguralion under heat(PubMedID : 24916767)@immutans protein, putative, expressed K17893: AOX1, ubiquinol oxidase
14 Sobic.002G384700 40S ribosomal protein S9-2, putative, expressed K02997: RP-S9e, small subunit ribosomal protein S9e
15 Sobic.001G059700 LTPL73 - Protease inhibitor/seed storage/LTP family protein precursor, expressed -
16 Sobic.008G158332 - -
17 Sobic.005G110454 - -
18 Sobic.005G110451 - -
19 Sobic.002G124500 expansin precursor, putative, expressed -
20 Sobic.006G050800 expressed protein -


Gene co-expression network
sample Sobic003G060000 Sobic003G060000 SobicK026900 SobicK026900 Sobic003G060000--SobicK026900 Sobic001G114900 Sobic001G114900 Sobic003G060000--Sobic001G114900 Sobic008G027600 Sobic008G027600 Sobic003G060000--Sobic008G027600 Sobic010G009900 Sobic010G009900 Sobic003G060000--Sobic010G009900 Sobic010G158500 Sobic010G158500 Sobic003G060000--Sobic010G158500 Sobic003G073460 Sobic003G073460 Sobic003G060000--Sobic003G073460 Sobic005G066100 Sobic005G066100 Sobic003G060000--Sobic005G066100 Sobic006G158400 Sobic006G158400 Sobic003G060000--Sobic006G158400 Sobic004G202400 Sobic004G202400 Sobic003G060000--Sobic004G202400 Sobic004G297900 Sobic004G297900 SobicK026900--Sobic004G297900 Sobic007G090469 Sobic007G090469 SobicK026900--Sobic007G090469 Sobic001G238300 Sobic001G238300 SobicK026900--Sobic001G238300 Sobic006G202600 Sobic006G202600 SobicK026900--Sobic006G202600 SobicK026900--Sobic004G202400 Sobic002G425000 Sobic002G425000 SobicK026900--Sobic002G425000 Sobic010G270700 Sobic010G270700 SobicK026900--Sobic010G270700 Sobic001G237900 Sobic001G237900 SobicK026900--Sobic001G237900 Sobic004G295100 Sobic004G295100 SobicK026900--Sobic004G295100 Sobic003G026400 Sobic003G026400 Sobic001G114900--Sobic003G026400 Sobic001G114900--Sobic008G027600 Sobic002G010900 Sobic002G010900 Sobic001G114900--Sobic002G010900 Sobic002G369400 Sobic002G369400 Sobic001G114900--Sobic002G369400 Sobic008G022000 Sobic008G022000 Sobic001G114900--Sobic008G022000 Sobic006G008000 Sobic006G008000 Sobic001G114900--Sobic006G008000 Sobic002G422300 Sobic002G422300 Sobic001G114900--Sobic002G422300 Sobic008G158332 Sobic008G158332 Sobic001G114900--Sobic008G158332 Sobic008G066200 Sobic008G066200 Sobic001G114900--Sobic008G066200 Sobic008G027600--Sobic006G158400 Sobic008G027600--Sobic002G369400 Sobic008G158100 Sobic008G158100 Sobic008G027600--Sobic008G158100 Sobic010G043900 Sobic010G043900 Sobic008G027600--Sobic010G043900 Sobic001G318500 Sobic001G318500 Sobic008G027600--Sobic001G318500 Sobic008G027600--Sobic001G114900 Sobic003G007600 Sobic003G007600 Sobic008G027600--Sobic003G007600 Sobic009G145500 Sobic009G145500 Sobic008G027600--Sobic009G145500 Sobic002G243000 Sobic002G243000 Sobic008G027600--Sobic002G243000 Sobic007G054900 Sobic007G054900 Sobic010G009900--Sobic007G054900 Sobic006G050800 Sobic006G050800 Sobic010G009900--Sobic006G050800 Sobic009G116600 Sobic009G116600 Sobic010G009900--Sobic009G116600 Sobic001G242000 Sobic001G242000 Sobic010G009900--Sobic001G242000 Sobic010G009900--SobicK026900 Sobic010G045500 Sobic010G045500 Sobic010G009900--Sobic010G045500 Sobic010G009900--Sobic002G369400 Sobic003G136200 Sobic003G136200 Sobic010G009900--Sobic003G136200 Sobic002G012300 Sobic002G012300 Sobic010G009900--Sobic002G012300 Sobic010G158500--Sobic001G237900 Sobic010G158500--Sobic006G158400 Sobic007G204700 Sobic007G204700 Sobic010G158500--Sobic007G204700 Sobic002G124500 Sobic002G124500 Sobic010G158500--Sobic002G124500 Sobic010G158500--SobicK026900 Sobic010G063000 Sobic010G063000 Sobic010G158500--Sobic010G063000 Sobic010G158500--Sobic004G202400 Sobic008G127933 Sobic008G127933 Sobic010G158500--Sobic008G127933 Sobic010G158500--Sobic005G066100 Sobic008G158666 Sobic008G158666 Sobic003G073460--Sobic008G158666 Sobic003G073460--Sobic008G158332 Sobic002G338450 Sobic002G338450 Sobic003G073460--Sobic002G338450 Sobic003G073460--Sobic010G043900 Sobic003G073460--Sobic001G114900 Sobic001G188800 Sobic001G188800 Sobic003G073460--Sobic001G188800 Sobic005G213500 Sobic005G213500 Sobic003G073460--Sobic005G213500 Sobic003G073460--Sobic003G060000 Sobic003G301600 Sobic003G301600 Sobic003G073460--Sobic003G301600 Sobic005G066432 Sobic005G066432 Sobic005G066100--Sobic005G066432 Sobic005G066100--Sobic004G202400 Sobic005G065900 Sobic005G065900 Sobic005G066100--Sobic005G065900 Sobic005G066100--SobicK026900 Sobic005G066100--Sobic007G204700 Sobic005G066100--Sobic002G425000 Sobic010G148800 Sobic010G148800 Sobic005G066100--Sobic010G148800 Sobic005G066100--Sobic008G127933 Sobic005G066100--Sobic010G158500 Sobic006G158400--Sobic008G127933 Sobic006G158400--Sobic008G027600 Sobic006G158400--Sobic001G237900 Sobic006G158400--Sobic010G158500 Sobic006G158400--Sobic007G204700 Sobic006G158400--Sobic003G007600 Sobic006G158400--Sobic010G043900 Sobic006G158400--Sobic001G318500 Sobic003G299300 Sobic003G299300 Sobic006G158400--Sobic003G299300 Sobic006G197100 Sobic006G197100 Sobic004G202400--Sobic006G197100 Sobic001G416200 Sobic001G416200 Sobic004G202400--Sobic001G416200 Sobic004G202400--Sobic001G237900 Sobic004G202400--SobicK026900 Sobic003G157600 Sobic003G157600 Sobic004G202400--Sobic003G157600 Sobic004G349125 Sobic004G349125 Sobic004G202400--Sobic004G349125 Sobic004G042000 Sobic004G042000 Sobic004G202400--Sobic004G042000 Sobic002G042200 Sobic002G042200 Sobic004G202400--Sobic002G042200 Sobic003G311800 Sobic003G311800 Sobic004G202400--Sobic003G311800
Octagon: transcription factors


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