Gene annotation
Transcriptome id Sobic.004G015900.1
Synonym
Functional annotation expressed protein
UniProt C5XSE7
Pfam -
Panther DB PTHR35112
NCBI CDD -
KEGG Orthology -
Gene Ontology -


Orthologs (automatic annotation)
TAIR AT1G76250 : -
RAP-DB (Rice) LOC_Os02g02730.1 : expressed protein
MaizeGDB (Corn) Zm00025a035038
Brachypodium -
Barley -
Wheat -
Populus -


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Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.007G124301 - -
2 Sobic.002G202600 joka8, putative, expressed -
3 Sobic.008G151300 expressed protein -
4 Sobic.001G389000 "SAG (Senescence-associated gene): differentially expressed gene during developmental, salt-induced, and dark-induced senescence."(PubMedID : 27586543)@WRKY55, expressed -
5 Sobic.006G046900 expressed protein -
6 Sobic.009G181800 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@-(PubMedID : 9484480)@cytochrome P450, putative, expressed K09754: CYP98A, 5-O-(4-coumaroyl)-D-quinate 3'-monooxygenase
7 Sobic.003G079400 Ser/Thr protein kinase, putative, expressed -
8 Sobic.009G248100 SAG (Senescence-associated gene): up-regulated gene during dark-induced senescence.(PubMedID : 27586543)@expressed protein -
9 Sobic.003G029400 SAG (Senescence-associated gene): up-regulated gene during dark-induced senescence.(PubMedID : 27586543)@avr9/Cf-9 rapidly elicited protein 146, putative, expressed -
10 Sobic.003G219800 transferase family protein, putative, expressed -
11 Sobic.001G082600 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@bHelix-loop-helix transcription factor, putative, expressed -
12 Sobic.007G186100 protein kinase, putative, expressed K13436: pto-interacting protein 1
13 Sobic.010G262200 B-box (BBX) protein(PubMedID : 30626335)@B-box zinc finger family protein, putative, expressed -
14 Sobic.005G168800 DJ-1 family protein, putative, expressed K18881: D-lactate dehydratase
15 Sobic.001G494000 Expressed in older stem(PubMedID : 28649278)@homeodomain protein, putative, expressed -
16 Sobic.010G236100 C2 domain containing protein, expressed -
17 Sobic.008G106700 isoflavone reductase, putative, expressed -
18 Sobic.010G252401 - K14488: SAUR family protein
19 Sobic.001G139100 expressed protein -
20 Sobic.006G169900 Not investigated(PubMedID : 23766026)@AP2 domain containing protein, expressed -


Gene co-expression network
sample Sobic004G015900 Sobic004G015900 Sobic007G124301 Sobic007G124301 Sobic004G015900--Sobic007G124301 Sobic002G202600 Sobic002G202600 Sobic004G015900--Sobic002G202600 Sobic008G151300 Sobic008G151300 Sobic004G015900--Sobic008G151300 Sobic001G389000 Sobic001G389000 Sobic004G015900--Sobic001G389000 Sobic006G046900 Sobic006G046900 Sobic004G015900--Sobic006G046900 Sobic009G181800 Sobic009G181800 Sobic004G015900--Sobic009G181800 Sobic003G079400 Sobic003G079400 Sobic004G015900--Sobic003G079400 Sobic009G248100 Sobic009G248100 Sobic004G015900--Sobic009G248100 Sobic003G029400 Sobic003G029400 Sobic004G015900--Sobic003G029400 Sobic002G272900 Sobic002G272900 Sobic007G124301--Sobic002G272900 Sobic010G052200 Sobic010G052200 Sobic007G124301--Sobic010G052200 Sobic007G124301--Sobic001G389000 Sobic003G037800 Sobic003G037800 Sobic007G124301--Sobic003G037800 Sobic007G124301--Sobic002G202600 Sobic001G459800 Sobic001G459800 Sobic007G124301--Sobic001G459800 Sobic001G483400 Sobic001G483400 Sobic007G124301--Sobic001G483400 Sobic009G183300 Sobic009G183300 Sobic007G124301--Sobic009G183300 Sobic009G073300 Sobic009G073300 Sobic007G124301--Sobic009G073300 Sobic002G245100 Sobic002G245100 Sobic002G202600--Sobic002G245100 Sobic001G119000 Sobic001G119000 Sobic002G202600--Sobic001G119000 Sobic002G202600--Sobic003G037800 Sobic002G202600--Sobic001G389000 Sobic003G430400 Sobic003G430400 Sobic002G202600--Sobic003G430400 Sobic003G158500 Sobic003G158500 Sobic002G202600--Sobic003G158500 Sobic003G429000 Sobic003G429000 Sobic002G202600--Sobic003G429000 Sobic009G159400 Sobic009G159400 Sobic002G202600--Sobic009G159400 Sobic005G018700 Sobic005G018700 Sobic002G202600--Sobic005G018700 Sobic008G177800 Sobic008G177800 Sobic008G151300--Sobic008G177800 Sobic001G516600 Sobic001G516600 Sobic008G151300--Sobic001G516600 Sobic010G262200 Sobic010G262200 Sobic008G151300--Sobic010G262200 Sobic004G333900 Sobic004G333900 Sobic008G151300--Sobic004G333900 Sobic005G010200 Sobic005G010200 Sobic008G151300--Sobic005G010200 Sobic001G513700 Sobic001G513700 Sobic008G151300--Sobic001G513700 Sobic010G234600 Sobic010G234600 Sobic008G151300--Sobic010G234600 Sobic008G151300--Sobic002G272900 Sobic002G294700 Sobic002G294700 Sobic008G151300--Sobic002G294700 Sobic001G389000--Sobic009G159400 Sobic001G389000--Sobic003G037800 Sobic004G101300 Sobic004G101300 Sobic001G389000--Sobic004G101300 Sobic004G340900 Sobic004G340900 Sobic001G389000--Sobic004G340900 Sobic010G259600 Sobic010G259600 Sobic001G389000--Sobic010G259600 Sobic006G092500 Sobic006G092500 Sobic001G389000--Sobic006G092500 Sobic001G139100 Sobic001G139100 Sobic001G389000--Sobic001G139100 Sobic001G038900 Sobic001G038900 Sobic001G389000--Sobic001G038900 Sobic001G389000--Sobic003G429000 Sobic001G169500 Sobic001G169500 Sobic006G046900--Sobic001G169500 Sobic005G011300 Sobic005G011300 Sobic006G046900--Sobic005G011300 Sobic006G249300 Sobic006G249300 Sobic006G046900--Sobic006G249300 Sobic006G046900--Sobic001G139100 Sobic003G377100 Sobic003G377100 Sobic006G046900--Sobic003G377100 Sobic006G046900--Sobic001G459800 Sobic008G186100 Sobic008G186100 Sobic006G046900--Sobic008G186100 Sobic004G336500 Sobic004G336500 Sobic006G046900--Sobic004G336500 Sobic002G068600 Sobic002G068600 Sobic006G046900--Sobic002G068600 Sobic001G418100 Sobic001G418100 Sobic009G181800--Sobic001G418100 Sobic003G219800 Sobic003G219800 Sobic009G181800--Sobic003G219800 Sobic010G252401 Sobic010G252401 Sobic009G181800--Sobic010G252401 Sobic009G181800--Sobic008G186100 Sobic005G113300 Sobic005G113300 Sobic009G181800--Sobic005G113300 Sobic003G027400 Sobic003G027400 Sobic009G181800--Sobic003G027400 Sobic002G393400 Sobic002G393400 Sobic009G181800--Sobic002G393400 Sobic002G250000 Sobic002G250000 Sobic009G181800--Sobic002G250000 Sobic004G310200 Sobic004G310200 Sobic009G181800--Sobic004G310200 Sobic004G046200 Sobic004G046200 Sobic003G079400--Sobic004G046200 Sobic001G082600 Sobic001G082600 Sobic003G079400--Sobic001G082600 Sobic006G197100 Sobic006G197100 Sobic003G079400--Sobic006G197100 Sobic002G003800 Sobic002G003800 Sobic003G079400--Sobic002G003800 Sobic004G042000 Sobic004G042000 Sobic003G079400--Sobic004G042000 Sobic008G106700 Sobic008G106700 Sobic003G079400--Sobic008G106700 Sobic003G016100 Sobic003G016100 Sobic003G079400--Sobic003G016100 Sobic004G349125 Sobic004G349125 Sobic003G079400--Sobic004G349125 Sobic009G187200 Sobic009G187200 Sobic003G079400--Sobic009G187200 Sobic009G248100--Sobic003G027400 Sobic003G321200 Sobic003G321200 Sobic009G248100--Sobic003G321200 Sobic001G325400 Sobic001G325400 Sobic009G248100--Sobic001G325400 Sobic009G035200 Sobic009G035200 Sobic009G248100--Sobic009G035200 Sobic009G229000 Sobic009G229000 Sobic009G248100--Sobic009G229000 Sobic003G117600 Sobic003G117600 Sobic009G248100--Sobic003G117600 Sobic009G248100--Sobic006G092500 Sobic009G111000 Sobic009G111000 Sobic009G248100--Sobic009G111000 Sobic006G039100 Sobic006G039100 Sobic009G248100--Sobic006G039100 Sobic007G176100 Sobic007G176100 Sobic003G029400--Sobic007G176100 Sobic008G048400 Sobic008G048400 Sobic003G029400--Sobic008G048400 Sobic008G055100 Sobic008G055100 Sobic003G029400--Sobic008G055100 Sobic003G029400--Sobic009G181800 Sobic003G039600 Sobic003G039600 Sobic003G029400--Sobic003G039600 Sobic004G284700 Sobic004G284700 Sobic003G029400--Sobic004G284700 Sobic003G029400--Sobic001G418100 Sobic008G034700 Sobic008G034700 Sobic003G029400--Sobic008G034700 Sobic007G006300 Sobic007G006300 Sobic003G029400--Sobic007G006300
Octagon: transcription factors


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