Gene annotation
Transcriptome id Sobic.003G125332.1
Synonym -
Functional annotation -
UniProt A0A1W0VX24
Pfam PF07738
Panther DB PTHR12911 PTHR12911:SF27
NCBI CDD -
KEGG Orthology K19347; SUN domain-containing protein 1/2
Gene Ontology -


Orthologs (automatic annotation)
TAIR AT5G04990 : SAD1/UNC-84 domain protein 1
RAP-DB (Rice) LOC_Os01g16220.1 : Sad1 / UNC-like C-terminal domain containing protein, putative, expressed
MaizeGDB (Corn) Zm00025a024006
Brachypodium -
Barley HORVU3Hr1G037960.1
Wheat TraesCS3B02G214100 , TraesCS3D02G188400 , TraesCS3A02G184300
Populus -


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Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.002G136600 expressed protein -
2 Sobic.003G034600 CAMK_CAMK_like_Aur_like.1 - CAMK includes calcium/calmodulin depedent protein kinases, expressed K08850: aurora kinase, other
3 Sobic.010G101100 E2F family transcription factor protein, putative, expressed -
4 Sobic.002G074200 ribosomal protein, putative, expressed K02981: RP-S2e, small subunit ribosomal protein S2e
5 Sobic.001G531300 glycosyl hydrolases family 16 protein, protein, expressed -
6 Sobic.003G276500 outer mitochondrial membrane porin, putative, expressed K15040: voltage-dependent anion channel protein 2
7 Sobic.006G190600 heavy metal-associated domain containing protein, expressed -
8 Sobic.001G475500 ras-related protein, putative, expressed K07904: Ras-related protein Rab-11A
9 Sobic.005G142500 plant protein of unknown function domain containing protein, expressed -
10 Sobic.006G031400 expressed protein -
11 Sobic.002G242100 expressed protein -
12 Sobic.003G375100 snRK1-interacting protein 1, putative, expressed -
13 Sobic.004G217450 - -
14 Sobic.003G160700 RALFL8 - Rapid ALkalinization Factor RALF family protein precursor, expressed -
15 Sobic.003G174700 expressed protein -
16 Sobic.003G122200 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence./late senescence marker during developmental senescence(PubMedID : 27586543)@ADP-ribosylation factor, putative, expressed K07937: ADP-ribosylation factor 1/2
K07977: Arf/Sar family, other
17 Sobic.002G247800 Highest expression level in primordial inflorescence(PubMedID : 27501690)@OsSPL17 - SBP-box gene family member, expressed -
18 Sobic.001G295800 expressed protein -
19 Sobic.007G150800 expressed protein -
20 Sobic.010G054300 expressed protein K17776: metaxin


Gene co-expression network
sample Sobic003G125332 Sobic003G125332 Sobic002G136600 Sobic002G136600 Sobic003G125332--Sobic002G136600 Sobic003G034600 Sobic003G034600 Sobic003G125332--Sobic003G034600 Sobic010G101100 Sobic010G101100 Sobic003G125332--Sobic010G101100 Sobic002G074200 Sobic002G074200 Sobic003G125332--Sobic002G074200 Sobic001G531300 Sobic001G531300 Sobic003G125332--Sobic001G531300 Sobic003G276500 Sobic003G276500 Sobic003G125332--Sobic003G276500 Sobic006G190600 Sobic006G190600 Sobic003G125332--Sobic006G190600 Sobic001G475500 Sobic001G475500 Sobic003G125332--Sobic001G475500 Sobic005G142500 Sobic005G142500 Sobic003G125332--Sobic005G142500 Sobic002G136600--Sobic002G074200 Sobic003G375100 Sobic003G375100 Sobic002G136600--Sobic003G375100 Sobic004G170500 Sobic004G170500 Sobic002G136600--Sobic004G170500 Sobic004G252100 Sobic004G252100 Sobic002G136600--Sobic004G252100 Sobic001G529400 Sobic001G529400 Sobic002G136600--Sobic001G529400 Sobic002G136600--Sobic003G125332 Sobic002G136600--Sobic003G276500 Sobic007G195800 Sobic007G195800 Sobic002G136600--Sobic007G195800 Sobic002G136600--Sobic010G101100 Sobic004G217450 Sobic004G217450 Sobic003G034600--Sobic004G217450 Sobic003G122200 Sobic003G122200 Sobic003G034600--Sobic003G122200 Sobic003G034600--Sobic001G475500 Sobic003G307400 Sobic003G307400 Sobic003G034600--Sobic003G307400 Sobic006G191800 Sobic006G191800 Sobic003G034600--Sobic006G191800 Sobic006G200000 Sobic006G200000 Sobic003G034600--Sobic006G200000 Sobic003G160700 Sobic003G160700 Sobic003G034600--Sobic003G160700 Sobic009G173500 Sobic009G173500 Sobic003G034600--Sobic009G173500 Sobic007G150800 Sobic007G150800 Sobic003G034600--Sobic007G150800 Sobic010G101100--Sobic004G217450 Sobic006G031400 Sobic006G031400 Sobic010G101100--Sobic006G031400 Sobic002G385400 Sobic002G385400 Sobic010G101100--Sobic002G385400 Sobic010G101100--Sobic003G034600 Sobic003G279100 Sobic003G279100 Sobic010G101100--Sobic003G279100 Sobic003G345700 Sobic003G345700 Sobic010G101100--Sobic003G345700 Sobic010G101100--Sobic003G125332 Sobic010G101100--Sobic003G276500 Sobic010G101100--Sobic002G074200 Sobic005G080900 Sobic005G080900 Sobic002G074200--Sobic005G080900 Sobic002G074200--Sobic003G160700 Sobic002G372400 Sobic002G372400 Sobic002G074200--Sobic002G372400 Sobic006G159600 Sobic006G159600 Sobic002G074200--Sobic006G159600 Sobic006G067800 Sobic006G067800 Sobic002G074200--Sobic006G067800 Sobic003G078200 Sobic003G078200 Sobic002G074200--Sobic003G078200 Sobic003G436700 Sobic003G436700 Sobic002G074200--Sobic003G436700 Sobic010G076400 Sobic010G076400 Sobic002G074200--Sobic010G076400 Sobic006G137800 Sobic006G137800 Sobic002G074200--Sobic006G137800 Sobic001G156500 Sobic001G156500 Sobic001G531300--Sobic001G156500 Sobic003G121000 Sobic003G121000 Sobic001G531300--Sobic003G121000 Sobic001G531300--Sobic003G307400 Sobic002G219400 Sobic002G219400 Sobic001G531300--Sobic002G219400 Sobic002G251100 Sobic002G251100 Sobic001G531300--Sobic002G251100 Sobic003G408900 Sobic003G408900 Sobic001G531300--Sobic003G408900 Sobic010G138300 Sobic010G138300 Sobic001G531300--Sobic010G138300 Sobic009G232100 Sobic009G232100 Sobic001G531300--Sobic009G232100 Sobic001G531300--Sobic003G345700 Sobic003G276500--Sobic003G375100 Sobic003G276500--Sobic002G136600 Sobic003G276500--Sobic010G101100 Sobic003G276500--Sobic003G125332 Sobic003G276500--Sobic002G074200 Sobic009G042500 Sobic009G042500 Sobic003G276500--Sobic009G042500 Sobic001G296000 Sobic001G296000 Sobic003G276500--Sobic001G296000 Sobic009G080300 Sobic009G080300 Sobic003G276500--Sobic009G080300 Sobic010G085000 Sobic010G085000 Sobic003G276500--Sobic010G085000 Sobic001G481000 Sobic001G481000 Sobic006G190600--Sobic001G481000 Sobic003G117500 Sobic003G117500 Sobic006G190600--Sobic003G117500 Sobic001G304300 Sobic001G304300 Sobic006G190600--Sobic001G304300 Sobic006G190600--Sobic005G142500 Sobic001G295800 Sobic001G295800 Sobic006G190600--Sobic001G295800 Sobic002G350500 Sobic002G350500 Sobic006G190600--Sobic002G350500 Sobic003G321200 Sobic003G321200 Sobic006G190600--Sobic003G321200 Sobic005G004700 Sobic005G004700 Sobic006G190600--Sobic005G004700 Sobic002G247800 Sobic002G247800 Sobic006G190600--Sobic002G247800 Sobic001G502900 Sobic001G502900 Sobic001G475500--Sobic001G502900 Sobic001G475500--Sobic003G160700 Sobic001G475500--Sobic003G122200 Sobic005G113300 Sobic005G113300 Sobic001G475500--Sobic005G113300 Sobic001G475500--Sobic007G150800 Sobic001G475500--Sobic009G173500 Sobic001G361600 Sobic001G361600 Sobic001G475500--Sobic001G361600 Sobic004G220000 Sobic004G220000 Sobic001G475500--Sobic004G220000 Sobic001G475500--Sobic003G117500 Sobic004G170800 Sobic004G170800 Sobic005G142500--Sobic004G170800 Sobic004G050700 Sobic004G050700 Sobic005G142500--Sobic004G050700 Sobic001G264300 Sobic001G264300 Sobic005G142500--Sobic001G264300 Sobic001G264400 Sobic001G264400 Sobic005G142500--Sobic001G264400 Sobic003G427700 Sobic003G427700 Sobic005G142500--Sobic003G427700 Sobic005G051600 Sobic005G051600 Sobic005G142500--Sobic005G051600 Sobic005G142500--Sobic002G247800 Sobic009G221800 Sobic009G221800 Sobic005G142500--Sobic009G221800 Sobic009G130300 Sobic009G130300 Sobic005G142500--Sobic009G130300
Octagon: transcription factors


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