Gene annotation
Transcriptome id Sobic.010G054300.2
Synonym Sb10g004750
Functional annotation expressed protein
UniProt A0A1W0VRL0
Pfam -
Panther DB PTHR12289 PTHR12289:SF38
NCBI CDD KOG3028; Translocase of outer mitochondrial membrane complex, subunit TOM37/Metaxin 1
KEGG Orthology K17776; metaxin
Gene Ontology -


Orthologs (automatic annotation)
TAIR AT2G19080 : metaxin-related
RAP-DB (Rice) LOC_Os06g07160.1 : expressed protein
MaizeGDB (Corn) Zm00025a049894
Brachypodium PNT76441 , KQK19423
Barley HORVU7Hr1G027350.2 , HORVU7Hr1G027350.3 , HORVU7Hr1G027350.4
Wheat TraesCS7B02G030900 , TraesCS7A02G130600 , TraesCS7A02G130600 , TraesCS7D02G130000 , TraesCS7D02G130000 , TraesCS7D02G130000
Populus -


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cDNA sequences
Sobic.010G054300


Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.009G101700 40S ribosomal protein S7, putative, expressed K02993: RP-S7e, small subunit ribosomal protein S7e
2 Sobic.005G080900 expressed protein -
3 Sobic.004G349700 rRNA 2-O-methyltransferase fibrillarin 2, putative, expressed K14563: NOP1, rRNA 2'-O-methyltransferase fibrillarin
4 Sobic.003G387900 ribosomal L18p/L5e family protein, putative, expressed K02932: RP-L5e, large subunit ribosomal protein L5e
5 Sobic.006G261900 expressed protein -
6 Sobic.007G029400 60S acidic ribosomal protein P0, putative, expressed K02941: RP-LP0, large subunit ribosomal protein LP0
7 Sobic.005G050500 ribosomal protein L3, putative, expressed K02925: RP-L3e, large subunit ribosomal protein L3e
8 Sobic.009G179100 ribosomal protein L7Ae, putative, expressed K02908: RP-L30e, large subunit ribosomal protein L30e
9 Sobic.002G056200 40S ribosomal protein S15, putative, expressed K02958: RP-S15e, small subunit ribosomal protein S15e
10 Sobic.001G334300 - K02966: RP-S19e, small subunit ribosomal protein S19e
11 Sobic.002G101000 mitochondrial prohibitin complex protein 2, putative, expressed K17081: prohibitin 2
12 Sobic.002G379500 40S ribosomal protein S6, putative, expressed K02991: RP-S6e, small subunit ribosomal protein S6e
13 Sobic.009G144300 ribosomal protein L7Ae, putative, expressed K02951: RP-S12e, small subunit ribosomal protein S12e
14 Sobic.003G363800 L1P family of ribosomal proteins domain containing protein, expressed K02865: RP-L10Ae, large subunit ribosomal protein L10Ae
15 Sobic.003G109600 40S ribosomal protein S5, putative, expressed K02989: RP-S5e, small subunit ribosomal protein S5e
16 Sobic.006G137100 60S ribosomal protein L23A, putative, expressed K02893: RP-L23Ae, large subunit ribosomal protein L23Ae
17 Sobic.006G138100 ribosomal protein S17, putative, expressed K02949: RP-S11e, small subunit ribosomal protein S11e
18 Sobic.002G047600 60S ribosomal protein L15, putative, expressed K02877: RP-L15e, large subunit ribosomal protein L15e
19 Sobic.006G213000 ribosomal protein S17, putative, expressed K02949: RP-S11e, small subunit ribosomal protein S11e
20 Sobic.009G242400 ribosomal protein L7Ae, putative, expressed K02951: RP-S12e, small subunit ribosomal protein S12e


Gene co-expression network
sample Sobic010G054300 Sobic010G054300 Sobic009G101700 Sobic009G101700 Sobic010G054300--Sobic009G101700 Sobic005G080900 Sobic005G080900 Sobic010G054300--Sobic005G080900 Sobic004G349700 Sobic004G349700 Sobic010G054300--Sobic004G349700 Sobic003G387900 Sobic003G387900 Sobic010G054300--Sobic003G387900 Sobic006G261900 Sobic006G261900 Sobic010G054300--Sobic006G261900 Sobic007G029400 Sobic007G029400 Sobic010G054300--Sobic007G029400 Sobic005G050500 Sobic005G050500 Sobic010G054300--Sobic005G050500 Sobic009G179100 Sobic009G179100 Sobic010G054300--Sobic009G179100 Sobic002G056200 Sobic002G056200 Sobic010G054300--Sobic002G056200 Sobic009G101700--Sobic009G179100 Sobic009G101700--Sobic005G050500 Sobic001G334300 Sobic001G334300 Sobic009G101700--Sobic001G334300 Sobic009G101700--Sobic003G387900 Sobic004G342400 Sobic004G342400 Sobic009G101700--Sobic004G342400 Sobic006G213000 Sobic006G213000 Sobic009G101700--Sobic006G213000 Sobic001G226500 Sobic001G226500 Sobic009G101700--Sobic001G226500 Sobic009G242400 Sobic009G242400 Sobic009G101700--Sobic009G242400 Sobic002G379500 Sobic002G379500 Sobic009G101700--Sobic002G379500 Sobic003G436700 Sobic003G436700 Sobic005G080900--Sobic003G436700 Sobic003G109600 Sobic003G109600 Sobic005G080900--Sobic003G109600 Sobic004G252100 Sobic004G252100 Sobic005G080900--Sobic004G252100 Sobic005G080900--Sobic002G379500 Sobic006G067800 Sobic006G067800 Sobic005G080900--Sobic006G067800 Sobic005G080900--Sobic009G101700 Sobic005G080900--Sobic006G261900 Sobic001G016500 Sobic001G016500 Sobic005G080900--Sobic001G016500 Sobic002G286900 Sobic002G286900 Sobic005G080900--Sobic002G286900 Sobic010G069400 Sobic010G069400 Sobic004G349700--Sobic010G069400 Sobic001G039400 Sobic001G039400 Sobic004G349700--Sobic001G039400 Sobic004G349700--Sobic003G387900 Sobic001G085400 Sobic001G085400 Sobic004G349700--Sobic001G085400 Sobic002G047600 Sobic002G047600 Sobic004G349700--Sobic002G047600 Sobic002G304900 Sobic002G304900 Sobic004G349700--Sobic002G304900 Sobic009G233400 Sobic009G233400 Sobic004G349700--Sobic009G233400 Sobic002G115000 Sobic002G115000 Sobic004G349700--Sobic002G115000 Sobic007G019400 Sobic007G019400 Sobic004G349700--Sobic007G019400 Sobic006G137100 Sobic006G137100 Sobic003G387900--Sobic006G137100 Sobic003G387900--Sobic006G213000 Sobic003G387900--Sobic002G379500 Sobic003G387900--Sobic007G019400 Sobic009G076400 Sobic009G076400 Sobic003G387900--Sobic009G076400 Sobic003G249700 Sobic003G249700 Sobic003G387900--Sobic003G249700 Sobic003G387900--Sobic002G047600 Sobic003G387900--Sobic010G069400 Sobic003G387900--Sobic002G056200 Sobic006G262300 Sobic006G262300 Sobic006G261900--Sobic006G262300 Sobic006G261900--Sobic003G436700 Sobic006G261900--Sobic002G379500 Sobic006G261900--Sobic003G109600 Sobic010G251600 Sobic010G251600 Sobic006G261900--Sobic010G251600 Sobic006G261900--Sobic006G213000 Sobic002G081600 Sobic002G081600 Sobic006G261900--Sobic002G081600 Sobic009G173500 Sobic009G173500 Sobic006G261900--Sobic009G173500 Sobic006G261900--Sobic001G016500 Sobic007G029400--Sobic005G050500 Sobic007G029400--Sobic001G039400 Sobic007G029400--Sobic009G179100 Sobic007G029400--Sobic003G109600 Sobic007G029400--Sobic002G304900 Sobic007G029400--Sobic009G233400 Sobic009G223300 Sobic009G223300 Sobic007G029400--Sobic009G223300 Sobic007G029400--Sobic010G069400 Sobic007G029400--Sobic004G349700 Sobic005G050500--Sobic002G304900 Sobic005G050500--Sobic010G069400 Sobic005G050500--Sobic009G233400 Sobic005G050500--Sobic002G056200 Sobic005G050500--Sobic001G039400 Sobic005G050500--Sobic003G387900 Sobic005G050500--Sobic001G334300 Sobic005G050500--Sobic009G179100 Sobic005G050500--Sobic007G029400 Sobic009G179100--Sobic002G304900 Sobic009G179100--Sobic009G101700 Sobic009G179100--Sobic004G342400 Sobic009G179100--Sobic001G334300 Sobic009G179100--Sobic005G050500 Sobic009G179100--Sobic009G233400 Sobic009G179100--Sobic003G387900 Sobic009G179100--Sobic001G039400 Sobic009G179100--Sobic009G173500 Sobic002G056200--Sobic002G379500 Sobic002G056200--Sobic006G137100 Sobic001G403500 Sobic001G403500 Sobic002G056200--Sobic001G403500 Sobic002G056200--Sobic006G213000 Sobic002G056200--Sobic007G019400 Sobic002G056200--Sobic003G387900 Sobic002G056200--Sobic003G109600 Sobic001G436200 Sobic001G436200 Sobic002G056200--Sobic001G436200 Sobic002G056200--Sobic002G047600
Octagon: transcription factors


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